RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 SRSF11Q05519 484 aaKnown RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 LRIT3Q3SXY7 679 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 AP1ARQ63HQ0 302 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 Q6ZS52 159 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 MSANTD1Q6ZTZ1 278 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 ZNF551Q7Z340 670 aaPredicted RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 GPR141Q7Z602 305 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 STK32CQ86UX6 486 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 OFCC1Q8IZS5 231 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 PDXPQ96GD0 296 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 BMFQ96LC9 184 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 TIMMDC1Q9NPL8 285 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 SPATA7Q9P0W8 599 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 EBF1Q9UH73 591 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 NCKAP1Q9Y2A7 1128 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 CACNB4O00305 520 aaPredicted RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 PRMT3O60678 531 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 CST1P01037 141 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 RPN2P04844 631 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 TIA1P31483 386 aaKnown RBP eCLIP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 KIAA1024LP59773 190 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 MYBPC3Q14896 1274 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 ZIK1Q3SY52 487 aaPredicted RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 PAGE2BQ5JRK9 111 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 EOGTQ5NDL2 527 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 CCNYL2Q5T2Q4 361 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 GALNT18Q6P9A2 607 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 TRIM69Q86WT6 500 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 PNPT1Q8TCS8 783 aaKnown RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 OR1E3Q8WZA6 343 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 FAM3CQ92520 227 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 SH3KBP1Q96B97 665 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 REPS1Q96D71 796 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 OR51B5Q9H339 312 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 MAGIXQ9H6Y5 334 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 DCAF13Q9NV06 445 aaKnown RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 SCHIP1Q9P0W5 487 aaPredicted RBP13.47□□□□□ -0.25
ABCF3-201ENST00000292808 MOSPD1Q9UJG1 213 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 TSC22D4Q9Y3Q8 395 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 GPSM3Q9Y4H4 160 aa13.47□□□□□ -0.25
ABCF3-201ENST00000292808 LRP4O75096 1905 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 GNG14A0A1W2PPG7 69 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 OR52A4PA6NMU1 304 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 EVPLLA8MZ36 301 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 CLIC1O00299 241 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 SAP18O00422 153 aaKnown RBP13.46□□□□□ -0.25
ABCF3-201ENST00000292808 GNGT2O14610 69 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 ENGP17813 658 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 TTKP33981 857 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 ABHD18Q0P651 414 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 PPP1R8Q12972 351 aaKnown RBP13.46□□□□□ -0.25
ABCF3-201ENST00000292808 DPY19L1Q2PZI1 675 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 ZCCHC8Q6NZY4 707 aaKnown RBP13.46□□□□□ -0.25
ABCF3-201ENST00000292808 ZDHHC13Q8IUH4 622 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 CLEC4FQ8N1N0 589 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 WDR48Q8TAF3 677 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.46□□□□□ -0.254e-7■■■■■ 32.3
ABCF3-201ENST00000292808 CAMK1GQ96NX5 476 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 FERD3LQ96RJ6 166 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 NPLQ9BXD5 320 aaPredicted RBP13.46□□□□□ -0.25
ABCF3-201ENST00000292808 XKR8Q9H6D3 395 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 UBE2ZQ9H832 354 aaPredicted RBP13.46□□□□□ -0.25
ABCF3-201ENST00000292808 WASH6PQ9NQA3 447 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 PRDM8Q9NQV8 689 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 IMP3Q9NV31 184 aaKnown RBP13.46□□□□□ -0.25
ABCF3-201ENST00000292808 SIRT5Q9NXA8 310 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 HEATR5BQ9P2D3 2071 aa13.46□□□□□ -0.25
ABCF3-201ENST00000292808 PRSS38A1L453 326 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 SCAMP2O15127 329 aaKnown RBP13.46□□□□□ -0.26
ABCF3-201ENST00000292808 EML2O95834 649 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 TGFB1P01137 390 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 GBAP04062 536 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 HOXC4P09017 264 aaPredicted RBP13.46□□□□□ -0.26
ABCF3-201ENST00000292808 THRBP10828 461 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 ACADMP11310 421 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 TRPC1P48995 793 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 SPIN4Q56A73 249 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 COMMD6Q7Z4G1 85 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 SVOPLQ8N434 492 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 REXO5Q96IC2 774 aaKnown RBP13.46□□□□□ -0.26
ABCF3-201ENST00000292808 DUSP26Q9BV47 211 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 DDX18Q9NVP1 670 aaKnown RBP13.46□□□□□ -0.26
ABCF3-201ENST00000292808 USE1Q9NZ43 259 aa13.46□□□□□ -0.26
ABCF3-201ENST00000292808 NUP214P35658 2090 aaPredicted RBP13.45□□□□□ -0.26
ABCF3-201ENST00000292808 SNRNP200O75643 2136 aaKnown RBP13.45□□□□□ -0.26
ABCF3-201ENST00000292808 GABRR3A8MPY1 467 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 EPN2O95208 641 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 GLULP15104 373 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 PIK3CBP42338 1070 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 HLCSP50747 726 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 EPS8Q12929 822 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 FBXO43Q4G163 708 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 C10orf62Q5T681 223 aaPredicted RBP13.45□□□□□ -0.26
ABCF3-201ENST00000292808 TMIGD1Q6UXZ0 262 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 ANKRD53Q8N9V6 530 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 DENND6BQ8NEG7 585 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 ABHD11Q8NFV4 315 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 SMPDL3AQ92484 453 aa13.45□□□□□ -0.26
ABCF3-201ENST00000292808 PHF7Q9BWX1 381 aaPredicted RBP13.45□□□□□ -0.26
ABCF3-201ENST00000292808 OSBPL10Q9BXB5 764 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms