RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 MYF6P23409 242 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC10A7Q0GE19 358 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 GK3PQ14409 553 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 SMCO1Q147U7 214 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 RPS27LQ71UM5 84 aaKnown RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 PEG10Q86TG7 708 aaKnown RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 SYVN1Q86TM6 617 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 C17orf64Q86WR6 236 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 TMEM25Q86YD3 366 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 GHDCQ8N2G8 530 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 DDX1Q92499 740 aaKnown RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 TCEAL4Q96EI5 215 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 SPATA5L1Q9BVQ7 753 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 TTLL2Q9BWV7 592 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 LHPPQ9H008 270 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 CSNK1G1Q9HCP0 422 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ERVK13-1Q9NX77 482 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 TVP23BQ9NYZ1 205 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 GIMAP2Q9UG22 337 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 PCDHB11Q9Y5F2 797 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 A0A1W2PP18 115 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ADAM12O43184 909 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 MMP20O60882 483 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 BCAS1O75363 584 aaPredicted RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 REM1O75628 298 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ATE1O95260 518 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 HSPA7P48741 367 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 AP3S2P59780 193 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 CREB5Q02930 508 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 FOXM1Q08050 763 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 CST6Q15828 149 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 DCST1Q5T197 706 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 TSTD2Q5T7W7 516 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 FAM91A1Q658Y4 838 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC25A24Q6NUK1 477 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 LRRTM4Q86VH4 590 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 SERPINA9Q86WD7 417 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 CFAP206Q8IYR0 622 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ANKFN1Q8N957 763 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 PJA1Q8NG27 643 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 OR10G2Q8NGC3 310 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC38A4Q969I6 547 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ZNF607Q96SK3 696 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ANKRD60Q9BZ19 345 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 DLGAP1O14490 977 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ECI2O75521 394 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 MT-ND2P03891 347 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ASGR2P07307 311 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 PTGER3P43115 390 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 OGDHQ02218 1023 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 GALNT2Q10471 571 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 USF2Q15853 346 aaPredicted RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 PIGGQ5H8A4 983 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 UBE2R2Q712K3 238 aaPredicted RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 UMODL1-AS1Q8N2C9 162 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 DEFB119Q8N690 84 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 LMX1AQ8TE12 382 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ELSPBP1Q96BH3 223 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 OR2AG1Q9H205 316 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 PCDHGB3Q9Y5G1 929 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 POLR2AP24928 1970 aaKnown RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 PTTG1O95997 202 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 ARSAP15289 507 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 TNFRSF4P43489 277 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 GDI2P50395 445 aaKnown RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 ATOH1Q92858 354 aaPredicted RBP11□□□□□ -0.65
NPC1L1-201ENST00000289547 ZNF285Q96NJ3 590 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 PCBD2Q9H0N5 130 aa11□□□□□ -0.65
NPC1L1-201ENST00000289547 A0A1W2PP55 124 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 OR2AG2A6NM03 316 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 J3KR12 359 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 VILLO15195 856 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 HLA-DQB2P05538 268 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 C7P10643 843 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 PEPDP12955 493 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 OGNP20774 298 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 UQCRC1P31930 480 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 HSD17B2P37059 387 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 MNDAP41218 407 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 HTRA4P83105 476 aaPredicted RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SF1Q15637 639 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 ATP6AP1Q15904 470 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 Q6ZNX1 250 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC9B2Q86UD5 537 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 CLP1Q92989 425 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 USP7Q93009 1102 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC22A18Q96BI1 424 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 MOCOSQ96EN8 888 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 RIOK2Q9BVS4 552 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 FAIM2Q9BWQ8 316 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 KCNN2Q9H2S1 579 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 HPF1Q9NWY4 346 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 EDARQ9UNE0 448 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 MAU2Q9Y6X3 613 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 STX16O14662 325 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 AQP9O43315 295 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SLC28A2O43868 658 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 RNGTTO60942 597 aaKnown RBP10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 LEFTY1O75610 366 aa10.99□□□□□ -0.65
NPC1L1-201ENST00000289547 SEMA4FO95754 770 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms