RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 EGLN2Q96KS0 407 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CEP19Q96LK0 163 aa10□□□□□ -0.81
SKA1-201ENST00000285116 SLC30A2Q9BRI3 323 aa10□□□□□ -0.81
SKA1-201ENST00000285116 GON7Q9BXV9 100 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ELOVL6Q9H5J4 265 aa10□□□□□ -0.81
SKA1-201ENST00000285116 REEP1Q9H902 201 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PLSCR3Q9NRY6 295 aa10□□□□□ -0.81
SKA1-201ENST00000285116 GIMAP4Q9NUV9 329 aa10□□□□□ -0.81
SKA1-201ENST00000285116 C14orf119Q9NWQ9 140 aa10□□□□□ -0.81
SKA1-201ENST00000285116 GPRC5BQ9NZH0 403 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PDP1Q9P0J1 537 aaPredicted RBP10□□□□□ -0.81
SKA1-201ENST00000285116 KIF17Q9P2E2 1029 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PRELID1Q9Y255 219 aa10□□□□□ -0.81
SKA1-201ENST00000285116 KRT87PA6NCN2 255 aa10□□□□□ -0.81
SKA1-201ENST00000285116 A8MV72 311 aaPredicted RBP10□□□□□ -0.81
SKA1-201ENST00000285116 MYO1GB0I1T2 1018 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ALPIP09923 528 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ACRP10323 421 aa10□□□□□ -0.81
SKA1-201ENST00000285116 JUPP14923 745 aa10□□□□□ -0.81
SKA1-201ENST00000285116 M6PRP20645 277 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PCGF2P35227 344 aa10□□□□□ -0.81
SKA1-201ENST00000285116 GGT2P36268 569 aa10□□□□□ -0.81
SKA1-201ENST00000285116 RPIAP49247 311 aa10□□□□□ -0.81
SKA1-201ENST00000285116 RPP38P78345 283 aaKnown RBP10□□□□□ -0.81
SKA1-201ENST00000285116 FCHO2Q0JRZ9 810 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CHRNA6Q15825 494 aa10□□□□□ -0.81
SKA1-201ENST00000285116 LINGO4Q6UY18 593 aa10□□□□□ -0.81
SKA1-201ENST00000285116 Q6ZNB5 142 aa10□□□□□ -0.81
SKA1-201ENST00000285116 BPHLQ86WA6 291 aaPredicted RBP10□□□□□ -0.81
SKA1-201ENST00000285116 ENTHD1Q8IYW4 607 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ELMOD2Q8IZ81 293 aa10□□□□□ -0.81
SKA1-201ENST00000285116 OR8H2Q8N162 312 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CRIPAKQ8N1N5 446 aa10□□□□□ -0.81
SKA1-201ENST00000285116 SLC43A3Q8NBI5 491 aa10□□□□□ -0.81
SKA1-201ENST00000285116 FAM83CQ9BQN1 747 aa10□□□□□ -0.81
SKA1-201ENST00000285116 TRPM5Q9NZQ8 1165 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CRLS1Q9UJA2 301 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CFL2Q9Y281 166 aa10□□□□□ -0.81
SKA1-201ENST00000285116 SAMHD1Q9Y3Z3 626 aaKnown RBP10□□□□□ -0.81
SKA1-201ENST00000285116 PCDHB11Q9Y5F2 797 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PCDHGB3Q9Y5G1 929 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PCDHGA6Q9Y5G7 932 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PLXNA2O75051 1894 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ALPK3Q96L96 1907 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CARNS1A5YM72 827 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ZSCAN5BA6NJL1 495 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ERVH48-1M5A8F1 160 aa10□□□□□ -0.81
SKA1-201ENST00000285116 FPGTO14772 594 aa10□□□□□ -0.81
SKA1-201ENST00000285116 GREM1O60565 184 aa10□□□□□ -0.81
SKA1-201ENST00000285116 SLITRK5O94991 958 aa10□□□□□ -0.81
SKA1-201ENST00000285116 DNTTP04053 509 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ENGP17813 658 aa10□□□□□ -0.81
SKA1-201ENST00000285116 TACR1P25103 407 aa10□□□□□ -0.81
SKA1-201ENST00000285116 EPHA2P29317 976 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PKLRP30613 574 aa10□□□□□ -0.81
SKA1-201ENST00000285116 GRK5P34947 590 aa10□□□□□ -0.81
SKA1-201ENST00000285116 HNF1BP35680 557 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ARPP19P56211 112 aa10□□□□□ -0.81
SKA1-201ENST00000285116 OLR1P78380 273 aa10□□□□□ -0.81
SKA1-201ENST00000285116 CAMK2GQ13555 558 aaPredicted RBP10□□□□□ -0.81
SKA1-201ENST00000285116 EIF4HQ15056 248 aaKnown RBP10□□□□□ -0.81
SKA1-201ENST00000285116 UGT8Q16880 541 aa10□□□□□ -0.81
SKA1-201ENST00000285116 PLEKHS1Q5SXH7 462 aa10□□□□□ -0.81
SKA1-201ENST00000285116 FRG2Q64ET8 278 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ZNF675Q8TD23 568 aa10□□□□□ -0.81
SKA1-201ENST00000285116 UBE2FQ969M7 185 aa10□□□□□ -0.81
SKA1-201ENST00000285116 HSH2DQ96JZ2 352 aa10□□□□□ -0.81
SKA1-201ENST00000285116 FRG2BQ96QU4 278 aa10□□□□□ -0.81
SKA1-201ENST00000285116 DHRS9Q9BPW9 319 aa10□□□□□ -0.81
SKA1-201ENST00000285116 MRPL9Q9BYD2 267 aaKnown RBP10□□□□□ -0.81
SKA1-201ENST00000285116 OR51E2Q9H255 320 aa10□□□□□ -0.81
SKA1-201ENST00000285116 TRIM39Q9HCM9 518 aa10□□□□□ -0.81
SKA1-201ENST00000285116 ACOXLQ9NUZ1 547 aa10□□□□□ -0.81
SKA1-201ENST00000285116 SPATA6Q9NWH7 488 aaPredicted RBP10□□□□□ -0.81
SKA1-201ENST00000285116 THUMPD1Q9NXG2 353 aaKnown RBP10□□□□□ -0.81
SKA1-201ENST00000285116 TNRC18O15417 2968 aaPredicted RBP9.99□□□□□ -0.81
SKA1-201ENST00000285116 KNL1Q8NG31 2342 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 BRWD1Q9NSI6 2320 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CELSR3Q9NYQ7 3312 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 A0A075B6Q4 140 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 C1orf226A1L170 272 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 MEIOCA2RUB1 952 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 MAGEB17A8MXT2 336 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ARHGAP33O14559 1287 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 HOXA2O43364 376 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 FKTNO75072 461 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ZNF682O95780 498 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CDK1P06493 297 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 C21orf33P30042 268 aaPredicted RBP9.99□□□□□ -0.81
SKA1-201ENST00000285116 KCNJ10P78508 379 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 BNC1Q01954 994 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 BCL2L1Q07817 233 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ARHGEF7Q14155 803 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 IRF3Q14653 427 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ZXDCQ2QGD7 858 aaPredicted RBP9.99□□□□□ -0.81
SKA1-201ENST00000285116 SGO1Q5FBB7 561 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ARMC4Q5T2S8 1044 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 RETSATQ6NUM9 610 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 CLDN19Q8N6F1 224 aa9.99□□□□□ -0.81
SKA1-201ENST00000285116 ATG16L2Q8NAA4 619 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms