RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 RIC1Q4ADV7 1423 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 TNS2Q63HR2 1409 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 PRSS51A0A1B0GVH4 220 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 DNAJB6O75190 326 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 LUMP51884 338 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 TMEM236Q5W0B7 351 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 C7orf61Q8IZ16 206 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 Q8N402 240 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 ELP5Q8TE02 316 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 PMEPA1Q969W9 287 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 ESAMQ96AP7 390 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 SNX27Q96L92 541 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 TREX2Q9BQ50 279 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 MRM3Q9HC36 420 aaKnown RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 MGAT4CQ9UBM8 478 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 SOBPA7XYQ1 873 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 CNTN5O94779 1100 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 PAK4O96013 591 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 CAPN3P20807 821 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 HMGCS1Q01581 520 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 GAD2Q05329 585 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 UAP1L1Q3KQV9 507 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 MBLAC2Q68D91 279 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 BORAQ6PGQ7 559 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 LINGO4Q6UY18 593 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 GPR152Q8TDT2 470 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 THEM6Q8WUY1 208 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 JPH3Q8WXH2 748 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 GPR20Q99678 358 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 DPCDQ9BVM2 203 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 SAV1Q9H4B6 383 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 ZDHHC2Q9UIJ5 367 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 LAMP5Q9UJQ1 280 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 SCDO00767 359 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 PCDH17O14917 1159 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 AOC2O75106 756 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 GPR68Q15743 365 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 C6orf141Q5SZD1 244 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 NAT16Q8N8M0 369 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 OR14C36Q8NHC7 312 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 NEIL3Q8TAT5 605 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 DGAT2Q96PD7 388 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 OSBPL2Q9H1P3 480 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 MS4A12Q9NXJ0 267 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 ARHGAP23Q9P227 1491 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 TVP23AA6NH52 213 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF705EA8MWA4 302 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 SULT1C2O00338 296 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 RAD51DO75771 328 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 AHSA1O95433 338 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 FAM163BP0C2L3 166 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 CFL1P23528 166 aaKnown RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 FRKP42685 505 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 CARD16Q5EG05 197 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 PNCKQ6P2M8 343 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 CCBE1Q6UXH8 406 aaPredicted RBP8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 COMMD7Q86VX2 200 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 VGLL2Q8N8G2 317 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 SMPDL3AQ92484 453 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 RBP7Q96R05 134 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 CCM2Q9BSQ5 444 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 COQ4Q9Y3A0 265 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 PCDHB14Q9Y5E9 798 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 PTPRMP28827 1452 aa8.44□□□□□ -1.06
SCUBE3-201ENST00000274938 EEF1E1O43324 174 aaKnown RBP8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 RGS6P49758 472 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 SNTA1Q13424 505 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 DECR1Q16698 335 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 REEP3Q6NUK4 255 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 KCTD18Q6PI47 426 aaPredicted RBP8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 GOLGA7Q7Z5G4 137 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 BEST3Q8N1M1 668 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 PHTF2Q8N3S3 785 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 C7orf34Q96L11 122 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 JSRP1Q96MG2 331 aaPredicted RBP8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 ORAI3Q9BRQ5 295 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 FAIMQ9NVQ4 179 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 DMAC2Q9NW81 257 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 TAS2R8Q9NYW2 309 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 TRAPPC13A5PLN9 417 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 S1PR1P21453 382 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 PRKCHP24723 683 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 RPL10P27635 214 aaKnown RBP8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 CCND3P30281 292 aaPredicted RBP8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 HOXC8P31273 242 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 HTR2BP41595 481 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 MAGEA6P43360 314 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 UFM1P61960 85 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 ST3GAL4Q11206 333 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 CEACAM20Q6UY09 585 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 HSDL2Q6YN16 418 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 USP50Q70EL3 339 aaPredicted RBP8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 ACDQ96AP0 544 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 AKT1S1Q96B36 256 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 FUBP3Q96I24 572 aaKnown RBP eCLIP8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 URM1Q9BTM9 101 aaKnown RBP8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 ACTL8Q9H568 366 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 LMTK2Q8IWU2 1503 aa8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 DENRO43583 198 aaKnown RBP8.43□□□□□ -1.06
SCUBE3-201ENST00000274938 SCGB2A1O75556 95 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms