RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 NECTIN4Q96NY8 510 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 LTN1O94822 1766 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 HYKKA2RU49 373 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 LSM1O15116 133 aaKnown RBP16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 C8BP07358 591 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 FHP07954 510 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 MPC1LP0DKB6 136 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 PGAM2P15259 253 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 CD36P16671 472 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 EDNRBP24530 442 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 AMIGO3Q86WK7 504 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 NRROSQ86YC3 692 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 UBE2J2Q8N2K1 259 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 PMM1Q92871 262 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 ZBTB26Q9HCK0 441 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 PRTFDC1Q9NRG1 225 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 GIN1Q9NXP7 522 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 TAS2R9Q9NYW1 312 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 PFDN2Q9UHV9 154 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 ZNF639Q9UID6 485 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 TMEM5Q9Y2B1 443 aa16.3■□□□□ 0.2
CROCCP3-201ENST00000263511 RNGTTO60942 597 aaKnown RBP16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 FCHO2Q0JRZ9 810 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 CCINQ13939 588 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 ZC3H3Q8IXZ2 948 aaKnown RBP16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 OR10T2Q8NGX3 314 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 REEP4Q9H6H4 257 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 MEMO1Q9Y316 297 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 PCDHGB2Q9Y5G2 931 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 ARHGAP9Q9BRR9 750 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 ZNF717Q9BY31 904 aaPredicted RBP16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 YTHDF1Q9BYJ9 559 aaKnown RBP16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 WDR6Q9NNW5 1121 aaKnown RBP16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 ONECUT3O60422 494 aaPredicted RBP16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 CSTBP04080 98 aaKnown RBP16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 VSX2P58304 361 aaPredicted RBP16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 SPATS1Q496A3 300 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 REEP3Q6NUK4 255 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 IGSF8Q969P0 613 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 ALPK1Q96QP1 1244 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 RBP7Q96R05 134 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 ZNF382Q96SR6 550 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 TRIM36Q9NQ86 728 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 TSPAN9O75954 239 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 RPP14O95059 124 aaKnown RBP16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 PER3P56645 1201 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 KCNA7Q96RP8 456 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 XKR8Q9H6D3 395 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 MVB12BQ9H7P6 319 aa16.29■□□□□ 0.2
CROCCP3-201ENST00000263511 KLHL33A6NCF5 533 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 SLC6A6P31641 620 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 PCLAFQ15004 111 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 ARL9Q6T311 187 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 RNF130Q86XS8 419 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 AQP11Q8NBQ7 271 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 SPATA6Q9NWH7 488 aaPredicted RBP16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 PTTG2Q9NZH5 202 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 A0A1W2PQU0 124 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 FAM72CH0Y354 149 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 ARL6IP5O75915 188 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 STC2O76061 302 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 RAB36O95755 333 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 RLN2P04090 185 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 ASGR2P07307 311 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 POU6F2P78424 691 aaPredicted RBP16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 FAM72AQ5TYM5 149 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 FAM72DQ6L9T8 149 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 ASPGQ86U10 573 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 FAM72BQ86X60 149 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 SLITRK4Q8IW52 837 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 OR9I1Q8NGQ6 314 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 CPNE2Q96FN4 548 aaPredicted RBP16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 CMKLR1Q99788 373 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 GRHPRQ9UBQ7 328 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 MALT1Q9UDY8 824 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 PRAMEF33A0A0G2JMD5 474 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 BLOC1S5-TXNDC5H3BN57 136 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 PRAMEF10O60809 474 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 C1GALT1C1LP0DN25 315 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 GJA8P48165 433 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 MEF2AQ02078 507 aaPredicted RBP16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 TCEAL1Q15170 157 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 SLC39A5Q6ZMH5 540 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 ZNF101Q8IZC7 436 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 STON2Q8WXE9 905 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 ACOT12Q8WYK0 555 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 GFM1Q96RP9 751 aaKnown RBP16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 TRIB3Q96RU7 358 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 HERC2P3Q9BVR0 1158 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 IL21RQ9HBE5 538 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 NLGN3Q9NZ94 848 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 C2orf78A6NCI8 922 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 TP53I11O14683 189 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 PFKLP17858 780 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 AOC1P19801 751 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 ACRV1P26436 265 aa16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 LEPRP48357 1165 aaKnown RBP16.28■□□□□ 0.2
CROCCP3-201ENST00000263511 ID2Q02363 134 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms