RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 KLHL20Q9Y2M5 609 aa13.03□□□□□ -0.32
VMP1-201ENST00000262291 CLIC1O00299 241 aa13.03□□□□□ -0.32
VMP1-201ENST00000262291 KMOO15229 486 aa13.03□□□□□ -0.32
VMP1-201ENST00000262291 SCN2BO60939 215 aa13.03□□□□□ -0.32
VMP1-201ENST00000262291 CEACAM5P06731 702 aa13.03□□□□□ -0.32
VMP1-201ENST00000262291 CD247P20963 164 aa13.03□□□□□ -0.32
VMP1-201ENST00000262291 KELP23276 732 aa13.03□□□□□ -0.32
VMP1-201ENST00000262291 TIA1P31483 386 aaKnown RBP eCLIP13.03□□□□□ -0.325e-17■■■■□ 20.3
VMP1-201ENST00000262291 RPS21P63220 83 aaKnown RBP13.03□□□□□ -0.32
VMP1-201ENST00000262291 FBXO15Q8NCQ5 510 aaPredicted RBP13.03□□□□□ -0.32
VMP1-201ENST00000262291 FBXL20Q96IG2 436 aa13.03□□□□□ -0.32
VMP1-201ENST00000262291 PHPT1Q9NRX4 125 aaPredicted RBP13.03□□□□□ -0.32
VMP1-201ENST00000262291 GPC6Q9Y625 555 aaPredicted RBP13.03□□□□□ -0.32
VMP1-201ENST00000262291 PLXND1Q9Y4D7 1925 aa13.03□□□□□ -0.32
VMP1-201ENST00000262291 SCAMP2O15127 329 aaKnown RBP13.02□□□□□ -0.32
VMP1-201ENST00000262291 CREG1O75629 220 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 ZNF682O95780 498 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 AQP1P29972 269 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 TNFRSF4P43489 277 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 NUP107P57740 925 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 TAS2R50P59544 299 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 CHRNB3Q05901 458 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 HIST2H2ACQ16777 129 aaPredicted RBP13.02□□□□□ -0.32
VMP1-201ENST00000262291 LRIF1Q5T3J3 769 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 HIST2H2AA3Q6FI13 130 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 PPP4R4Q6NUP7 873 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 ZNF852Q6ZMS4 543 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 KLHDC8AQ8IYD2 350 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 OFCC1Q8IZS5 231 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 LINC01555Q8NAE3 123 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 OR5K2Q8NHB8 316 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 MAL2Q969L2 176 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 ISOC1Q96CN7 298 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 C11orf24Q96F05 449 aaPredicted RBP13.02□□□□□ -0.32
VMP1-201ENST00000262291 FCRL1Q96LA6 429 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 F2RL3Q96RI0 385 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 HAUS8Q9BT25 410 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 MUC13Q9H3R2 512 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 LTB4R2Q9NPC1 389 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 SACM1LQ9NTJ5 587 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 SPASTQ9UBP0 616 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 ACSL6Q9UKU0 697 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 MAN2B2Q9Y2E5 1009 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 U3KQV3 271 aa13.02□□□□□ -0.32
VMP1-201ENST00000262291 PPM1DO15297 605 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 KLHL18O94889 574 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 ATE1O95260 518 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 HOXB3P14651 431 aaPredicted RBP13.02□□□□□ -0.33
VMP1-201ENST00000262291 HOXB9P17482 250 aaPredicted RBP13.02□□□□□ -0.33
VMP1-201ENST00000262291 ACSL1P33121 698 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 MTHFRP42898 656 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 GZMMP51124 257 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 DMPKQ09013 629 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 GAB1Q13480 694 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 KRT33BQ14525 404 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 FXNQ16595 210 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 TPRG1LQ5T0D9 272 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 TMIGD1Q6UXZ0 262 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 UNC5DQ6UXZ4 953 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 TBC1D21Q8IYX1 336 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 SLC47A1Q96FL8 570 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 SIPA1Q96FS4 1042 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 EFCAB11Q9BUY7 163 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 C1QTNF2Q9BXJ5 285 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 BRF2Q9HAW0 419 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 NTN4Q9HB63 628 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 FGF22Q9HCT0 170 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 C5AR2Q9P296 337 aa13.02□□□□□ -0.33
VMP1-201ENST00000262291 A0A1W2PPW3 197 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 A8MU76 341 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 CLOCKO15516 846 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 PI15O43692 258 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 DIRAS1O95057 198 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 SNAP29O95721 258 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 IDSP22304 550 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 AK4P27144 223 aaPredicted RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 TRIM23P36406 574 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 MAPK9P45984 424 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 C2orf80Q0P641 193 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 BNIP3Q12983 259 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 MTAPQ13126 283 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 SPIDRQ14159 915 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 LAPTM4AQ15012 233 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 ATP6AP1Q15904 470 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 FAM98BQ52LJ0 330 aaKnown RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 DHRS4L2Q6PKH6 230 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 TMEM92Q6UXU6 159 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 PRR23BQ6ZRT6 265 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 C17orf64Q86WR6 236 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 CHERPQ8IWX8 916 aaKnown RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 ANKRD53Q8N9V6 530 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 OR5AK3PQ8NH89 298 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 CCL4L1Q8NHW4 92 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 RPLP0P6Q8NHW5 317 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 TMBIM1Q969X1 311 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 MAGEB10Q96LZ2 347 aaPredicted RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 NDEL1Q9GZM8 345 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 ABCG4Q9H172 646 aa13.01□□□□□ -0.33
VMP1-201ENST00000262291 TRIT1Q9H3H1 467 aaKnown RBP13.01□□□□□ -0.33
VMP1-201ENST00000262291 SCHIP1Q9P0W5 487 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms