RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SLC22A4Q9H015 551 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 MMP27Q9H306 513 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 BPIFA1Q9NP55 256 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SIX4Q9UIU6 781 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 AHSA1O95433 338 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ELNP15502 786 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 FDXRP22570 491 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 HSPA7P48741 367 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TTLL10Q6ZVT0 673 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 C6orf120Q7Z4R8 191 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SLC7A13Q8TCU3 470 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SERINC2Q96SA4 455 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SMOQ99835 787 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 BRINP2Q9C0B6 783 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 EIF2B4Q9UI10 523 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 POU2F2P09086 479 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TIA1P31483 386 aaKnown RBP eCLIP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RORAP35398 523 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 BDKRB1P46663 353 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CCT3P49368 545 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 STARP49675 285 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CLDN8P56748 225 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 DPPA4Q7L190 304 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CFAP52Q8N1V2 620 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 IP6K3Q96PC2 410 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 C12orf65Q9H3J6 166 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 IFT46Q9NQC8 304 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SACM1LQ9NTJ5 587 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PNPOQ9NVS9 261 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 STOX2Q9P2F5 926 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 BTNL2Q9UIR0 455 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 EDARQ9UNE0 448 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 QSER1Q2KHR3 1735 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 OR14I1A6ND48 311 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SCN2BO60939 215 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SLC11A1P49279 550 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RPS3AP61247 264 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SLC10A7Q0GE19 358 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SLC39A4Q6P5W5 647 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TSEN15Q8WW01 171 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TM9SF4Q92544 642 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 NXPE2Q96DL1 559 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 MFSD3Q96ES6 412 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CMKLR1Q99788 373 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 NMUR1Q9HB89 426 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CD248Q9HCU0 757 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ITPKAP23677 461 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PRKAG1P54619 331 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SRP54P61011 504 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ADAM8P78325 824 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 POU6F2P78424 691 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 VEZF1Q14119 521 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 GPRC6AQ5T6X5 926 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 WDR88Q6ZMY6 472 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 GSTCDQ8NEC7 633 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 LRFN5Q96NI6 719 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TCF7L1Q9HCS4 588 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 OR6C2Q9NZP2 312 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 TDRD15B5MCY1 1934 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 JRKO75564 520 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CER1O95813 267 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 C1GALT1C1LP0DN25 315 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PORP16435 677 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF20P17024 532 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 AHRP35869 848 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF84P51523 738 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 MRPS10P82664 201 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 KCTD19Q17RG1 926 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RUNDC3AQ59EK9 446 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RAB41Q5JT25 222 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 KIAA1614Q5VZ46 1190 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ASPGQ86U10 573 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF321PQ8N8H1 164 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 VN1R2Q8NFZ6 395 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SCRN2Q96FV2 425 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SIGLEC10Q96LC7 697 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 PDCD10Q9BUL8 212 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CHID1Q9BWS9 393 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 UCK2Q9BZX2 261 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 GRIP2Q9C0E4 1043 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 MIR1-1HGQ9H1L0 117 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 BTRCQ9Y297 605 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 A0A1W2PPW3 197 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CLPXO76031 633 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SYNGR4O95473 234 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 MTHFD1P11586 935 aaKnown RBP4.17□□□□□ -1.74
VPS13C-202ENST00000261517 INHBCP55103 352 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CRADDP78560 199 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CDK6Q00534 326 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CAMK2DQ13557 499 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 E2F2Q14209 437 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 CMC1Q7Z7K0 106 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 SAPCD2Q86UD0 394 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 RASGRP3Q8IV61 690 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 FAM47BQ8NA70 645 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 OR10G2Q8NGC3 310 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 GPR151Q8TDV0 419 aa4.17□□□□□ -1.74
VPS13C-202ENST00000261517 NMD3Q96D46 503 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms