RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ZNF517Q6ZMY9 492 aaPredicted RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 LAX1Q8IWV1 398 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 APH1BQ8WW43 257 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 PHOX2BQ99453 314 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 POLR2J2Q9GZM3 115 aaKnown RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 RPRD1BQ9NQG5 326 aaKnown RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 TAS2R9Q9NYW1 312 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 TVP23BQ9NYZ1 205 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 NDRG4Q9ULP0 352 aaKnown RBP11.53□□□□□ -0.56
USHBP1-201ENST00000252597 CLEC4AQ9UMR7 237 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 N6AMT1Q9Y5N5 214 aa11.53□□□□□ -0.56
USHBP1-201ENST00000252597 SPEGQ15772 3267 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 TRAV19A0A0A6YYK7 116 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 ZNF840PA6NDX5 716 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 GABRR3A8MPY1 467 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 TSPAN19P0C672 248 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 ALPPL2P10696 532 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.56
USHBP1-201ENST00000252597 CYP2A7P20853 494 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 ATP6V1E1P36543 226 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 TGFBR2P37173 567 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 NRIP1P48552 1158 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 CDC42P60953 191 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 C2orf80Q0P641 193 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 IL18R1Q13478 541 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 DOC2AQ14183 400 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 OTOP2Q7RTS6 562 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 CMTM8Q8IZV2 173 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 MMP21Q8N119 569 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 SOCS4Q8WXH5 440 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 SLC30A2Q9BRI3 323 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 SLC35A5Q9BS91 424 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 MIEF1Q9NQG6 463 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 ABCB8Q9NUT2 735 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 FNIP2Q9P278 1114 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 GPSM3Q9Y4H4 160 aa11.52□□□□□ -0.56
USHBP1-201ENST00000252597 A0A1B0GVC2 190 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 GSAPA4D1B5 854 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 TMEM202A6NGA9 273 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 A6NIN4 97 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 KMOO15229 486 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 TNFRSF21O75509 655 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 CDRT1O95170 752 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 ITGAMP11215 1152 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 SERPINA4P29622 427 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 TNFSF8P32971 234 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 CSNK1DP48730 415 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 SREBF2Q12772 1141 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 SLAMF1Q13291 335 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 LRRC26Q2I0M4 334 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 CXorf57Q6NSI4 855 aaKnown RBP11.52□□□□□ -0.57
USHBP1-201ENST00000252597 SYCE2Q6PIF2 218 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 Q6ZVL8 140 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 ADCK2Q7Z695 626 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 GLCCI1Q86VQ1 547 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 ZSWIM9Q86XI8 627 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 C1QTNF3Q9BXJ4 246 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 FBXO8Q9NRD0 319 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 TRPC4Q9UBN4 977 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 SAGE2PA6NJ88 616 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 SMLR1H3BR10 107 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 RTCAO00442 366 aaKnown RBP11.52□□□□□ -0.57
USHBP1-201ENST00000252597 PRAMEF4O60810 478 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 ETHE1O95571 254 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 CLEC2LP0C7M8 214 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 AMD1P17707 334 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 NSG1P42857 185 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 ATAD3CQ5T2N8 411 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 PRAMEF9Q5VWM5 478 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 CAPN13Q6MZZ7 669 aaPredicted RBP11.52□□□□□ -0.57
USHBP1-201ENST00000252597 PTOV1Q86YD1 416 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 RAB43Q86YS6 212 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 TCEANCQ8N8B7 351 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 IPCEF1Q8WWN9 437 aaPredicted RBP11.52□□□□□ -0.57
USHBP1-201ENST00000252597 NACC2Q96BF6 587 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 SCLYQ96I15 445 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 C2orf49Q9BVC5 232 aaPredicted RBP11.52□□□□□ -0.57
USHBP1-201ENST00000252597 HOXD1Q9GZZ0 328 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 MAGIXQ9H6Y5 334 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 DYRK4Q9NR20 520 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 MUTYHQ9UIF7 546 aa11.52□□□□□ -0.57
USHBP1-201ENST00000252597 PDCD11Q14690 1871 aaKnown RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 OR6C70A6NIJ9 312 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 PSIP1O75475 530 aaKnown RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 ALDH6A1Q02252 535 aaKnown RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 GPR17Q13304 367 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 SCARB2Q14108 478 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 KEAP1Q14145 624 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CBX2Q14781 532 aaPredicted RBP11.51□□□□□ -0.57
USHBP1-201ENST00000252597 VEPH1Q14D04 833 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 GPRC6AQ5T6X5 926 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 TMIGD1Q6UXZ0 262 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 Q6ZVU0 165 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CADM2Q8N3J6 435 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 DNAJC22Q8N4W6 341 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 ENKURQ8TC29 256 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 TMEM159Q96B96 161 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 YIPF4Q9BSR8 244 aa11.51□□□□□ -0.57
USHBP1-201ENST00000252597 CPNE5Q9HCH3 593 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms