RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PCDH10Q9P2E7 1040 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 HES2Q9Y543 173 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 SDHDO14521 159 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 HSD3B1P14060 373 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 HSD3B2P26439 372 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 PPM1AP35813 382 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ACTBP60709 375 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 NCS1P62166 190 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ACTG1P63261 375 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 GALNT1Q10472 559 aaPredicted RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 SF1Q15637 639 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 AGAP6Q5VW22 663 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 GALNT13Q8IUC8 556 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 AGAP4Q96P64 663 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 TTPALQ9BTX7 342 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ADARB2Q9NS39 739 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 MRPL42Q9Y6G3 142 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 BCL9O00512 1426 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 SHPRHQ149N8 1683 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 CLIC3O95833 236 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 IFNA1P01562 189 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 RBMXP38159 391 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 RPS5P46782 204 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 SYNPOQ8N3V7 929 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 SPACA7Q96KW9 195 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 TRIB3Q96RU7 358 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 FAM198AQ9UFP1 575 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 HMGCS1Q01581 520 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 LINC00299Q6ZSB3 139 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 MFSD8Q8NHS3 518 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 CLIP3Q96DZ5 547 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 TMEM106CQ9BVX2 250 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 NUBP2Q9Y5Y2 271 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 BCAS1O75363 584 aaPredicted RBP7.96□□□□□ -1.13
APOB-201ENST00000233242 HTR1AP08908 422 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 CYCSP99999 105 aaKnown RBP7.96□□□□□ -1.13
APOB-201ENST00000233242 BTG3Q14201 252 aaPredicted RBP7.96□□□□□ -1.13
APOB-201ENST00000233242 SIMC1Q8NDZ2 872 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 OR7G1Q8NGA0 311 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 C2orf15Q8WU43 125 aaKnown RBP7.96□□□□□ -1.13
APOB-201ENST00000233242 SNX27Q96L92 541 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 SNX18Q96RF0 628 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 MYH13Q9UKX3 1938 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 TEX13DA0A0J9YY54 714 aaPredicted RBP7.96□□□□□ -1.13
APOB-201ENST00000233242 HMX3A6NHT5 357 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 CAPN3P20807 821 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 SLC6A6P31641 620 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 GLP1RP43220 463 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 ZNF527Q8NB42 609 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 KCTD13Q8WZ19 329 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 TESCQ96BS2 214 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 BRINP2Q9C0B6 783 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 ATP5A1P25705 553 aaKnown RBP7.96□□□□□ -1.13
APOB-201ENST00000233242 FNTBP49356 437 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 DAOAP59103 153 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 SNTB2Q13425 540 aaKnown RBP7.96□□□□□ -1.13
APOB-201ENST00000233242 RNF121Q9H920 327 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 GALNT2Q10471 571 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 NBPF12Q5TAG4 269 aaPredicted RBP7.96□□□□□ -1.13
APOB-201ENST00000233242 CES5AQ6NT32 575 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 NKD1Q969G9 470 aa7.96□□□□□ -1.13
APOB-201ENST00000233242 DCCP43146 1447 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 BMP8BP34820 402 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 METTL11BQ5VVY1 283 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 STEAP4Q687X5 459 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 BMP8AQ7Z5Y6 402 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 CHDHQ8NE62 594 aaPredicted RBP7.96□□□□□ -1.14
APOB-201ENST00000233242 BBS10Q8TAM1 723 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 IMP3Q9NV31 184 aaKnown RBP7.96□□□□□ -1.14
APOB-201ENST00000233242 OR1F1O43749 312 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 PPM1BO75688 479 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 ADH1AP07327 375 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 RETP07949 1114 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 CLCN7P51798 805 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 ACTA2P62736 377 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 ACTG2P63267 376 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 ZNF584Q8IVC4 421 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 KCNJ9Q92806 393 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 LOC100509620A0A075B734 347 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 C13orf42A0A1B0GVH6 325 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 WNT10BO00744 389 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 AOC2O75106 756 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 PLATP00750 562 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 CST3P01034 146 aaPredicted RBP7.96□□□□□ -1.14
APOB-201ENST00000233242 AVPR1BP47901 424 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 ZNF678Q5SXM1 525 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 GLT8D1Q68CQ7 371 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 ZNF597Q96LX8 424 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 MRI1Q9BV20 369 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 PPP1R11O60927 126 aaPredicted RBP7.96□□□□□ -1.14
APOB-201ENST00000233242 AHSGP02765 367 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 HLA-DQB2P05538 268 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 TDGQ13569 410 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 GNMTQ14749 295 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 IQCHQ86VS3 1027 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 GNPDA2Q8TDQ7 276 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 FUBP3Q96I24 572 aaKnown RBP eCLIP7.96□□□□□ -1.14
APOB-201ENST00000233242 RETREG1Q9H6L5 497 aa7.96□□□□□ -1.14
APOB-201ENST00000233242 ZNF395Q9H8N7 513 aaPredicted RBP7.96□□□□□ -1.14
APOB-201ENST00000233242 C6orf136Q5SQH8 315 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms