RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 SNTB1Q13884 538 aaKnown RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 SMCO1Q147U7 214 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 IRF4Q15306 451 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 INTS6LQ5JSJ4 861 aaKnown RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 DDI2Q5TDH0 399 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 LIPNQ5VXI9 398 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 RGS7BPQ6MZT1 257 aaPredicted RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 TAF2Q6P1X5 1199 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 MPZL3Q6UWV2 235 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 C17orf107Q6ZR85 190 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 CDHR3Q6ZTQ4 885 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 MSANTD1Q6ZTZ1 278 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 SLC26A9Q7LBE3 791 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 SLC41A1Q8IVJ1 513 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 CBARPQ8N350 705 aaPredicted RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 ZNF511Q8NB15 262 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 TRPV1Q8NER1 839 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 ZSCAN18Q8TBC5 510 aaPredicted RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 ROBO4Q8WZ75 1007 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 RORBQ92753 470 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 ZC3HAV1LQ96H79 300 aaKnown RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 HSH2DQ96JZ2 352 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 RBP7Q96R05 134 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 CCNL2Q96S94 520 aaPredicted RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 UPF3AQ9H1J1 476 aaKnown RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 OPN3Q9H1Y3 402 aaPredicted RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 DCSTAMPQ9H295 470 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 OR51V1Q9H2C8 321 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 CLEC4MQ9H2X3 399 aaPredicted RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 MRPL47Q9HD33 250 aaKnown RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 INTS10Q9NVR2 710 aaKnown RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 PACSIN3Q9UKS6 424 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 CA14Q9ULX7 337 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 ING4Q9UNL4 249 aa5.51□□□□□ -1.53
RFX4-201ENST00000229387 TIMM13Q9Y5L4 95 aaPredicted RBP5.51□□□□□ -1.53
RFX4-201ENST00000229387 A0A0U1RQS6 177 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 ZNF891A8MT65 544 aaPredicted RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 KPNA3O00505 521 aaPredicted RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 B4GAT1O43505 415 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 MMP20O60882 483 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 CABYRO75952 493 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 NSA2O95478 260 aaKnown RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 PAK4O96013 591 aaPredicted RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 ALDH1A1P00352 501 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 LALBAP00709 142 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 CHRM3P20309 590 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 PAICSP22234 425 aaKnown RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 RPS3P23396 243 aaKnown RBP eCLIP5.5□□□□□ -1.53
RFX4-201ENST00000229387 LIPAP38571 399 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 NR0B1P51843 470 aaKnown RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 SUCLG1P53597 346 aaKnown RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 NCS1P62166 190 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 EMX1Q04741 257 aaPredicted RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 ECH1Q13011 328 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 MSS51Q4VC12 460 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 FLYWCH1Q4VC44 716 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 IER5Q5VY09 327 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 LIPJQ5W064 366 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 PTRHD1Q6GMV3 140 aaKnown RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 ZC3H14Q6PJT7 736 aaKnown RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 C1orf122Q6ZSJ8 110 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 SHFQ7M4L6 423 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 RABEPKQ7Z6M1 372 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 ARL14Q8N4G2 192 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 ASB15Q8WXK1 588 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 NR4A3Q92570 626 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 RFKQ969G6 155 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 RFT1Q96AA3 541 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 TRMT61AQ96FX7 289 aaKnown RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 AURKBQ96GD4 344 aaPredicted RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 MYO19Q96H55 970 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 HPDLQ96IR7 371 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 MUS81Q96NY9 551 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 SLITRK1Q96PX8 696 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 WDR77Q9BQA1 342 aaPredicted RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 SYT17Q9BSW7 474 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 ING2Q9H160 280 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 IL1RAPQ9NPH3 570 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 TRMT13Q9NUP7 481 aaKnown RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 TP53BP1Q12888 1972 aaPredicted RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 RFPL4AA6NLU0 287 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 EFCAB9A8MZ26 197 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 RFPL4AL1F8VTS6 287 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 AIPO00170 330 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 WWP2O00308 870 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 HCRTR2O43614 444 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 GLRA3O75311 464 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 CREG1O75629 220 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 GPX5O75715 221 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 SNAPC5O75971 98 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 HCKP08631 526 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 RNH1P13489 461 aaKnown RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 LCP1P13796 627 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 ACADLP28330 430 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 MIPP30301 263 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 MSX2P35548 267 aaPredicted RBP5.5□□□□□ -1.53
RFX4-201ENST00000229387 CEACAM6P40199 344 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 PIK3CBP42338 1070 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 CCR9P51686 369 aa5.5□□□□□ -1.53
RFX4-201ENST00000229387 STARD6P59095 220 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms