RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 DUSP12Q9UNI6 340 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 VPS9D1Q9Y2B5 631 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 FRMPD3Q5JV73 1810 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 PLK4O00444 970 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 SEPT4O43236 478 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 ACSL4O60488 711 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 OR7A10O76100 309 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 ESR1P03372 595 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 CYP17A1P05093 508 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 GSTM1P09488 218 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 ERP29P30040 261 aaKnown RBP13.57□□□□□ -0.24
SF1-201ENST00000227503 GGT2P36268 569 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 SOX9P48436 509 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 TTPAP49638 278 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 RPS24P62847 133 aaKnown RBP13.57□□□□□ -0.24
SF1-201ENST00000227503 CPSF6Q16630 551 aaKnown RBP eCLIP13.57□□□□□ -0.24
SF1-201ENST00000227503 INO80DQ53TQ3 878 aaPredicted RBP13.57□□□□□ -0.24
SF1-201ENST00000227503 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.57□□□□□ -0.24
SF1-201ENST00000227503 ADAMTSL2Q86TH1 951 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 FAM124AQ86V42 546 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 OR8H3Q8N146 312 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 PAF1Q8N7H5 531 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 FLCNQ8NFG4 579 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 GPR62Q9BZJ7 368 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.57□□□□□ -0.247e-7■■■■□ 23
SF1-201ENST00000227503 GLTPQ9NZD2 209 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 PCDHGC4Q9Y5F7 938 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 A0A0C4DFX4 3053 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 OR6C75A6NL08 312 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 ACPPP15309 386 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 CD72P21854 359 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 S100A3P33764 101 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 CYP4F8P98187 520 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 MBTPS1Q14703 1052 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 QPRTQ15274 297 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 POU4F3Q15319 338 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 SF1Q15637 639 aaKnown RBP13.57□□□□□ -0.24
SF1-201ENST00000227503 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.57□□□□□ -0.247e-8■■□□□ 13.2
SF1-201ENST00000227503 MFSD14CQ5VZR4 134 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 FAHD1Q6P587 224 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 PAQR6Q6TCH4 344 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 KLHL17Q6TDP4 642 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 TMEM132CQ8N3T6 1108 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 KCNJ9Q92806 393 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 GTPBP3Q969Y2 492 aaKnown RBP13.57□□□□□ -0.24
SF1-201ENST00000227503 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 C1QTNF7Q9BXJ2 289 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.57□□□□□ -0.242e-9■■□□□ 11.8
SF1-201ENST00000227503 LRTM1Q9HBL6 345 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 NLKQ9UBE8 527 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 TRAPPC4Q9Y296 219 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 PIKFYVEQ9Y2I7 2098 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 RWDD3Q9Y3V2 267 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 MANSC4A6NHS7 340 aaPredicted RBP13.57□□□□□ -0.24
SF1-201ENST00000227503 RFXANKO14593 260 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 CCNDBP1O95273 360 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 CPSF4O95639 269 aaKnown RBP13.57□□□□□ -0.24
SF1-201ENST00000227503 IL6P05231 212 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 POU1F1P28069 291 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 PTPN6P29350 595 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 CLCN4P51793 760 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 CDH4P55283 916 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 PSPHP78330 225 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 ZRANB3Q5FWF4 1079 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 BCDIN3DQ7Z5W3 292 aaKnown RBP13.57□□□□□ -0.24
SF1-201ENST00000227503 SETD6Q8TBK2 473 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 PPP3R2Q96LZ3 170 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 EGFL8Q99944 293 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 EBPLQ9BY08 206 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 CDCP1Q9H5V8 836 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 IMPAD1Q9NX62 359 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 RAI2Q9Y5P3 530 aa13.57□□□□□ -0.24
SF1-201ENST00000227503 ANKRD66B4E2M5 251 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 PLD2O14939 933 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 C9P02748 559 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 TSPAN19P0C672 248 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 KDELR2P33947 212 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 RPS5P46782 204 aaKnown RBP13.56□□□□□ -0.24
SF1-201ENST00000227503 GPR19Q15760 415 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 CCDC85BQ15834 202 aaPredicted RBP13.56□□□□□ -0.24
SF1-201ENST00000227503 PDZK1Q5T2W1 519 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 ZNF621Q6ZSS3 439 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 IFNL1Q8IU54 200 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 RDH10Q8IZV5 341 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 SPPL2AQ8TCT8 520 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 C17orf62Q9BQA9 187 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 MIXL1Q9H2W2 232 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 HHATLQ9HCP6 504 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 FKBP14Q9NWM8 211 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 NDRG2Q9UN36 371 aaKnown RBP13.56□□□□□ -0.24
SF1-201ENST00000227503 A0A1W2PQL4 384 aaPredicted RBP13.56□□□□□ -0.24
SF1-201ENST00000227503 FABP12A6NFH5 140 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 ATP6V1G2-DDX39BF2Z307 99 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 FAM227AF5H4B4 570 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 TRIM77I1YAP6 450 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 SHOXO15266 292 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 SH3BGRLO75368 114 aa13.56□□□□□ -0.24
SF1-201ENST00000227503 CDRT1O95170 752 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms