RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ZNF583Q96ND8 569 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 CD300AQ9UGN4 299 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 HCN4Q9Y3Q4 1203 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 ASB1Q9Y576 335 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 PCDHGA10Q9Y5H3 936 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 C2orf92A0A1B0GVN3 265 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 HTR3EA5X5Y0 456 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 CAPNS1P04632 268 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 EPHX1P07099 455 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 LAMP2P13473 410 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 PAX3P23760 479 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 DCDC1P59894 354 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 TGM3Q08188 693 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 CMTM7Q96FZ5 175 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 OSBPL10Q9BXB5 764 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 POPDC3Q9HBV1 291 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 FBXO10Q9UK96 956 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 TMEM98Q9Y2Y6 226 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 PHLPP1O60346 1717 aa13.27□□□□□ -0.29
NFKB1-201ENST00000226574 TRAV6A0A075B6T7 132 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 QSOX1O00391 747 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 FAM163BP0C2L3 166 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 HLA-EP13747 358 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 SLC6A4P31645 630 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 HOXD12P35452 270 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 ARL4DP49703 201 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 NKX3-2P78367 333 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 TLR9Q9NR96 1032 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 RPL36Q9Y3U8 105 aaKnown RBP13.26□□□□□ -0.29
NFKB1-201ENST00000226574 CORINQ9Y5Q5 1042 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 ZNF780BQ9Y6R6 833 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 ATXN1LP0C7T5 689 aaKnown RBP13.26□□□□□ -0.29
NFKB1-201ENST00000226574 ADRA1AP35348 466 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 TGFBR1P36897 503 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 SMU1Q2TAY7 513 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 SOWAHCQ53LP3 525 aaPredicted RBP13.26□□□□□ -0.29
NFKB1-201ENST00000226574 BHLHB9Q6PI77 547 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 PELI3Q8N2H9 469 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 CADM2Q8N3J6 435 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 IQCF1Q8N6M8 205 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 FAM98AQ8NCA5 519 aaKnown RBP13.26□□□□□ -0.29
NFKB1-201ENST00000226574 CD99L2Q8TCZ2 262 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 GEMIN6Q8WXD5 167 aaKnown RBP13.26□□□□□ -0.29
NFKB1-201ENST00000226574 DNASE1L2Q92874 299 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 NT5C3BQ969T7 300 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 TIFAQ96CG3 184 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 KCTD7Q96MP8 289 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 RDH12Q96NR8 316 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 IL17CQ9P0M4 197 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 ITM2BQ9Y287 266 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 PCDHA9Q9Y5H5 950 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 FAM92AA1XBS5 289 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 ARHGEF33A8MVX0 844 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 TSPAN4O14817 238 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 INPPL1O15357 1258 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 SLC31A1O15431 190 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 MTHFD2P13995 350 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 TCF3P15923 654 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 ALDH3B2P48448 385 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 CLDN8P56748 225 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 TUBA1BP68363 451 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 GRIK2Q13002 908 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 NDUFAF6Q330K2 333 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 TUBA1AQ71U36 451 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 CXXC5Q7LFL8 322 aaKnown RBP13.26□□□□□ -0.29
NFKB1-201ENST00000226574 SERINC5Q86VE9 423 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 SMG7Q92540 1137 aaKnown RBP13.26□□□□□ -0.29
NFKB1-201ENST00000226574 TAS2R16Q9NYV7 291 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 TAS2R9Q9NYW1 312 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 NDOR1Q9UHB4 597 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 WNT6Q9Y6F9 365 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 PRSS21Q9Y6M0 314 aa13.26□□□□□ -0.29
NFKB1-201ENST00000226574 PDPK1O15530 556 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 POP7O75817 140 aaKnown RBP13.25□□□□□ -0.29
NFKB1-201ENST00000226574 TOXO94900 526 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 RCVRNP35243 200 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 CAPZA2P47755 286 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 MC1RQ01726 317 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 FAM171BQ6P995 826 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 SHQ1Q6PI26 577 aaKnown RBP13.25□□□□□ -0.29
NFKB1-201ENST00000226574 GDPD4Q6W3E5 623 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 FOXJ1Q92949 421 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 SLC29A3Q9BZD2 475 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 UCK2Q9BZX2 261 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 KCNK12Q9HB15 430 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 IL1RAPQ9NPH3 570 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 A0A1B0GVC2 190 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 MBLAC1A4D2B0 266 aaPredicted RBP13.25□□□□□ -0.29
NFKB1-201ENST00000226574 ZNF840PA6NDX5 716 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 A6NIN4 97 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 H7BY64 318 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 EFCAB14O75071 495 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 ACRP10323 421 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 C7P10643 843 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 CNR2P34972 360 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 AKR1D1P51857 326 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.29
NFKB1-201ENST00000226574 AP1S2P56377 157 aa13.25□□□□□ -0.29
NFKB1-201ENST00000226574 SEMA3BQ13214 749 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms