RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 DEFB110Q30KQ9 67 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 GGTA1PQ4G0N0 100 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 WASHC2DQ5SRD0 308 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 ZNF517Q6ZMY9 492 aaPredicted RBP12.99□□□□□ -0.33
UPK1A-201ENST00000222275 ASPGQ86U10 573 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 MYLK4Q86YV6 388 aaPredicted RBP12.99□□□□□ -0.33
UPK1A-201ENST00000222275 C10orf107Q8IVU9 208 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 TRIM42Q8IWZ5 723 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 KIRREL3Q8IZU9 778 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 CSNK1A1LQ8N752 337 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 SLC13A3Q8WWT9 602 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 ARL8AQ96BM9 186 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 ZNF382Q96SR6 550 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 DPH2Q9BQC3 489 aaPredicted RBP12.99□□□□□ -0.33
UPK1A-201ENST00000222275 TRIM4Q9C037 500 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 SEMA4BQ9NPR2 832 aaPredicted RBP12.99□□□□□ -0.33
UPK1A-201ENST00000222275 ZNF71Q9NQZ8 489 aaPredicted RBP12.99□□□□□ -0.33
UPK1A-201ENST00000222275 TXLNGQ9NUQ3 528 aa12.99□□□□□ -0.33
UPK1A-201ENST00000222275 FEZF1A0PJY2 475 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 HYKKA2RU49 373 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 NPHS1O60500 1241 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 CLEC3AO75596 197 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 EIF2S1P05198 315 aaKnown RBP12.98□□□□□ -0.33
UPK1A-201ENST00000222275 ENO1P06733 434 aaKnown RBP12.98□□□□□ -0.33
UPK1A-201ENST00000222275 CCNYL3P0C7X3 344 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 DHRS4L1P0CG22 281 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 PIM1P11309 404 aaPredicted RBP12.98□□□□□ -0.33
UPK1A-201ENST00000222275 EPORP19235 508 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 NR1D1P20393 614 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 GRK2P25098 689 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 ALDH3A1P30838 453 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 CDH13P55290 713 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 ZNF33BQ06732 778 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 GALNT1Q10472 559 aaPredicted RBP12.98□□□□□ -0.33
UPK1A-201ENST00000222275 KCNAB2Q13303 367 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 DNASE1L3Q13609 305 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 MUM1Q2TAK8 710 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 FRMPD2BQ6IN97 320 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 FRMD7Q6ZUT3 714 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 GPRIN3Q6ZVF9 776 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 LAS2Q8IYD9 372 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 PROKR1Q8TCW9 393 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 TRPC4APQ8TEL6 797 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 KIAA1143Q96AT1 154 aaPredicted RBP12.98□□□□□ -0.33
UPK1A-201ENST00000222275 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 TM4SF19Q96DZ7 209 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 MVB12AQ96EY5 273 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 C17orf62Q9BQA9 187 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 CENPKQ9BS16 269 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 FAM117AQ9C073 453 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 SLC25A18Q9H1K4 315 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 CHST8Q9H2A9 424 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 RHBGQ9H310 441 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 C12orf65Q9H3J6 166 aaKnown RBP12.98□□□□□ -0.33
UPK1A-201ENST00000222275 ACTR5Q9H9F9 607 aaPredicted RBP12.98□□□□□ -0.33
UPK1A-201ENST00000222275 PRM3Q9NNZ6 103 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 ZNF446Q9NWS9 450 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 PSD3Q9NYI0 1048 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 TRPS1Q9UHF7 1281 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 CDC14AQ9UNH5 594 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 SNX6Q9UNH7 406 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 KCNMB2Q9Y691 235 aa12.98□□□□□ -0.33
UPK1A-201ENST00000222275 UTP20O75691 2785 aaKnown RBP12.98□□□□□ -0.33
UPK1A-201ENST00000222275 USP9XQ93008 2570 aaPredicted RBP12.98□□□□□ -0.33
UPK1A-201ENST00000222275 PTPN13Q12923 2485 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 LOC105369274A0A096LPK9 316 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 LOC102723532A0A0G2JNH3 316 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 LRRC14BA6NHZ5 514 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 J3QKU1 62 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 OR7A17O14581 309 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 ZNF749O43361 778 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 SLC28A2O43868 658 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 CREG1O75629 220 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 ESRRBO95718 433 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 KRT6AP02538 564 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 KRT6BP04259 564 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 SERPINA6P08185 405 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 CD63P08962 238 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 AGXTP21549 392 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 RORAP35398 523 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 BCL6P41182 706 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 PIK3CBP42338 1070 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 KRT6CP48668 564 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 FOXL2P58012 376 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 STXBP1P61764 594 aaKnown RBP12.97□□□□□ -0.33
UPK1A-201ENST00000222275 MEF2AQ02078 507 aaPredicted RBP12.97□□□□□ -0.33
UPK1A-201ENST00000222275 TGM3Q08188 693 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 IFT88Q13099 833 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 FAM53BQ14153 422 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 PRTGQ2VWP7 1150 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 TTMPQ5BVD1 217 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 TTC19Q6DKK2 380 aaPredicted RBP12.97□□□□□ -0.33
UPK1A-201ENST00000222275 RHBDD2Q6NTF9 364 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 PRMT9Q6P2P2 845 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 PLD3Q8IV08 490 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 OR4N4Q8N0Y3 316 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 ARFGAP2Q8N6H7 521 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 ANKRD42Q8N9B4 389 aa12.97□□□□□ -0.33
UPK1A-201ENST00000222275 SRFBP1Q8NEF9 429 aaKnown RBP12.97□□□□□ -0.33
UPK1A-201ENST00000222275 OR52B6Q8NGF0 335 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms