RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SFTPA1Q8IWL2 248 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 GPR65Q8IYL9 337 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 IQCF1Q8N6M8 205 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 OR7G3Q8NG95 312 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 JPH3Q8WXH2 748 aaPredicted RBP14.51□□□□□ -0.09
EFNB1-201ENST00000204961 FATE1Q969F0 183 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 MS4A12Q9NXJ0 267 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 SCN8AQ9UQD0 1980 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 TRIM64CA6NLI5 447 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 NTN1O95631 604 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 PTHP01270 115 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 SPNP16150 400 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 SERPINB1P30740 379 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 MACC1Q6ZN28 852 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF605Q86T29 641 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 EXOSC8Q96B26 276 aaKnown RBP14.51□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF558Q96NG5 402 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 PRRG3Q9BZD7 231 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 SPG21Q9NZD8 308 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 IL20RAQ9UHF4 553 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 SLC25A13Q9UJS0 675 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 DYTNA2CJ06 578 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 SLC35F4A4IF30 521 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 WBP4O75554 376 aaKnown RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 PRKRAO75569 313 aaKnown RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 NPPAP01160 153 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 TYRP14679 529 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 WNT3P56703 355 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 SLC35A2P78381 396 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 TEAD2Q15562 447 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 SHQ1Q6PI26 577 aaKnown RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 RASGEF1AQ8N9B8 481 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 SETD9Q8NE22 299 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 ASZ1Q8WWH4 475 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 DOK1Q99704 481 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 CNPPD1Q9BV87 410 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 MRPL9Q9BYD2 267 aaKnown RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 ADPRHL2Q9NX46 363 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 MALT1Q9UDY8 824 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 FAM220BPB1ANY3 271 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 PRPS2P11908 318 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 PABPC1P11940 636 aaKnown RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 PRPS1L1P21108 318 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 FPR1P21462 350 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 SDHBP21912 280 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 TRIM60Q495X7 471 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 SPDYE7PQ495Y7 208 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 SHFQ7M4L6 423 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 WDR53Q7Z5U6 358 aaPredicted RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 CHPFQ8IZ52 775 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 CMTM7Q96FZ5 175 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 PDLIM5Q96HC4 596 aaKnown RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 TRIT1Q9H3H1 467 aaKnown RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 OSGEPL1Q9H4B0 414 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 MIEF1Q9NQG6 463 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 TRPC4Q9UBN4 977 aa14.5□□□□□ -0.09
EFNB1-201ENST00000204961 URB1O60287 2271 aaKnown RBP14.5□□□□□ -0.09
EFNB1-201ENST00000204961 WNT9AO14904 365 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 CXCL14O95715 111 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 ELFN1P0C7U0 828 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 PSMB5P28074 263 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 SOX3P41225 446 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF284Q2VY69 593 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 ARMCX4Q5H9R4 360 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 RAET1GQ6H3X3 334 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.49□□□□□ -0.09
EFNB1-201ENST00000204961 GOLM1Q8NBJ4 401 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 VPS37AQ8NEZ2 397 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 CEP19Q96LK0 163 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 SLC12A9Q9BXP2 914 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 EHD1Q9H4M9 534 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 IL21Q9HBE4 155 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 DDX28Q9NUL7 540 aaKnown RBP14.49□□□□□ -0.09
EFNB1-201ENST00000204961 BOLA1Q9Y3E2 137 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 LAMA1P25391 3075 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 RETP07949 1114 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 FHP07954 510 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 TRPC1P48995 793 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 GRSF1Q12849 480 aaKnown RBP eCLIP14.49□□□□□ -0.09
EFNB1-201ENST00000204961 PPIGQ13427 754 aaKnown RBP eCLIP14.49□□□□□ -0.09
EFNB1-201ENST00000204961 TSTQ16762 297 aaKnown RBP14.49□□□□□ -0.09
EFNB1-201ENST00000204961 SLC5A12Q1EHB4 618 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 DEPDC1Q5TB30 811 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 BRAT1Q6PJG6 821 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 PAQR6Q6TCH4 344 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 WDR36Q8NI36 951 aaKnown RBP14.49□□□□□ -0.09
EFNB1-201ENST00000204961 TM7SF3Q9NS93 570 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 STOX2Q9P2F5 926 aaPredicted RBP14.49□□□□□ -0.09
EFNB1-201ENST00000204961 SEC16AO15027 2179 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 SGTAO43765 313 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 CSF2RAP15509 400 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 NFE2L1Q14494 772 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 RGNQ15493 299 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 CCDC85BQ15834 202 aaPredicted RBP14.49□□□□□ -0.09
EFNB1-201ENST00000204961 GDPD4Q6W3E5 623 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 AADATQ8N5Z0 425 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 ZFP41Q8N8Y5 198 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 CCM2Q9BSQ5 444 aa14.49□□□□□ -0.09
EFNB1-201ENST00000204961 GPN2Q9H9Y4 310 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms