RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeast

Gene RPN13, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN13	YLR421C	MSC2	Q03455	724 aa		5.14	□□□□□ -1.59
RPN13	YLR421C	YLR224W	Q05947	369 aa		5.14	□□□□□ -1.59
RPN13	YLR421C	ACM1	Q08981	209 aa		5.14	□□□□□ -1.59
RPN13	YLR421C	YML020W	Q03722	664 aa		5.13	□□□□□ -1.59
RPN13	YLR421C	SPP382	Q06411	708 aa	Predicted RBP	5.13	□□□□□ -1.59
RPN13	YLR421C	HMI1	Q12039	706 aa		5.13	□□□□□ -1.59
RPN13	YLR421C	PUS9	Q12069	462 aa		5.13	□□□□□ -1.59
RPN13	YLR421C	STE11	P23561	717 aa		5.12	□□□□□ -1.59
RPN13	YLR421C	SLA2	P33338	968 aa		5.12	□□□□□ -1.59
RPN13	YLR421C	MSE1	P48525	536 aa		5.12	□□□□□ -1.59
RPN13	YLR421C	HFM1	P51979	1187 aa		5.12	□□□□□ -1.59
RPN13	YLR421C	SUN4	P53616	420 aa		5.12	□□□□□ -1.59
RPN13	YLR421C	MOT2	P34909	587 aa	Known RBP	5.11	□□□□□ -1.59
RPN13	YLR421C	GEM1	P39722	662 aa		5.11	□□□□□ -1.59
RPN13	YLR421C	PHO23	P50947	330 aa		5.11	□□□□□ -1.59
RPN13	YLR421C	TMA46	Q12000	345 aa	Known RBP	5.11	□□□□□ -1.59
RPN13	YLR421C	TRP2	P00899	507 aa	Known RBP	5.1	□□□□□ -1.59
RPN13	YLR421C	LYP1	P32487	611 aa		5.1	□□□□□ -1.59
RPN13	YLR421C	DUT1	P33317	147 aa		5.1	□□□□□ -1.59
RPN13	YLR421C	PNT1	P38969	423 aa		5.1	□□□□□ -1.59
RPN13	YLR421C	RRT14	P40470	206 aa		5.1	□□□□□ -1.59
RPN13	YLR421C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
RPN13	YLR421C	XYL2	Q07993	356 aa		5.1	□□□□□ -1.59
RPN13	YLR421C	NTO1	Q12311	748 aa		5.1	□□□□□ -1.59
RPN13	YLR421C	MND2	P40577	368 aa		5.09	□□□□□ -1.59
RPN13	YLR421C	OYE2	Q03558	400 aa	Known RBP	5.09	□□□□□ -1.59
RPN13	YLR421C	TPO1	Q07824	586 aa		5.09	□□□□□ -1.59
RPN13	YLR421C	INO1	P11986	533 aa		5.08	□□□□□ -1.6
RPN13	YLR421C	ENA1	P13587	1091 aa		5.08	□□□□□ -1.6
RPN13	YLR421C	HEM3	P28789	327 aa		5.08	□□□□□ -1.6
RPN13	YLR421C	PLB1	P39105	664 aa		5.08	□□□□□ -1.6
RPN13	YLR421C	ZRG8	P40021	1076 aa		5.08	□□□□□ -1.6
RPN13	YLR421C	ENA2	Q01896	1091 aa		5.08	□□□□□ -1.6
RPN13	YLR421C	EEB1	Q02891	456 aa		5.08	□□□□□ -1.6
RPN13	YLR421C	NOP12	Q08208	459 aa	Known RBP	5.08	□□□□□ -1.6
RPN13	YLR421C	YPL066W	Q12194	479 aa		5.08	□□□□□ -1.6
RPN13	YLR421C	ENA5	Q12691	1091 aa		5.08	□□□□□ -1.6
RPN13	YLR421C	THS1	P04801	734 aa	Known RBP	5.07	□□□□□ -1.6
RPN13	YLR421C	PET112	P33893	541 aa		5.07	□□□□□ -1.6
RPN13	YLR421C	SIP5	P40210	489 aa	Known RBP	5.07	□□□□□ -1.6
RPN13	YLR421C	AIM21	P40563	679 aa		5.07	□□□□□ -1.6
RPN13	YLR421C	SLI1	P53304	468 aa		5.07	□□□□□ -1.6
RPN13	YLR421C	GIS1	Q03833	894 aa		5.07	□□□□□ -1.6
RPN13	YLR421C	PMA1	P05030	918 aa	Known RBP	5.06	□□□□□ -1.6
RPN13	YLR421C	PMI40	P29952	429 aa	Known RBP	5.06	□□□□□ -1.6
RPN13	YLR421C	POA1	P38218	177 aa		5.06	□□□□□ -1.6
RPN13	YLR421C	YGL176C	P46945	554 aa		5.06	□□□□□ -1.6
RPN13	YLR421C	MTC3	P53077	123 aa		5.06	□□□□□ -1.6
RPN13	YLR421C	TYW3	P53177	273 aa		5.06	□□□□□ -1.6
RPN13	YLR421C	RMD1	Q03441	430 aa		5.06	□□□□□ -1.6
RPN13	YLR421C	CDC34	P14682	295 aa		5.05	□□□□□ -1.6
RPN13	YLR421C	MET12	P46151	657 aa		5.05	□□□□□ -1.6
RPN13	YLR421C	ADY3	Q07732	790 aa		5.05	□□□□□ -1.6
RPN13	YLR421C	OSW2	Q12202	724 aa		5.05	□□□□□ -1.6
RPN13	YLR421C	YKL107W	P34251	309 aa		5.04	□□□□□ -1.6
RPN13	YLR421C	NOP8	Q08287	484 aa	Predicted RBP	5.04	□□□□□ -1.6
RPN13	YLR421C	RKM4	Q12504	494 aa		5.04	□□□□□ -1.6
RPN13	YLR421C	TAD3	Q9URQ3	322 aa		5.04	□□□□□ -1.6
RPN13	YLR421C	HIS5	P07172	385 aa		5.03	□□□□□ -1.6
RPN13	YLR421C	DCG1	P32460	244 aa		5.03	□□□□□ -1.6
RPN13	YLR421C	KIN4	Q01919	800 aa		5.03	□□□□□ -1.6
RPN13	YLR421C	HRQ1	Q05549	1077 aa		5.03	□□□□□ -1.6
RPN13	YLR421C	YLR225C	Q05948	407 aa	Known RBP	5.03	□□□□□ -1.6
RPN13	YLR421C	YKL151C	P36059	337 aa		5.02	□□□□□ -1.61
RPN13	YLR421C	YAP1801	P38856	637 aa		5.02	□□□□□ -1.61
RPN13	YLR421C	ASF1	P32447	279 aa		5.01	□□□□□ -1.61
RPN13	YLR421C	SRP101	P32916	621 aa		5.01	□□□□□ -1.61
RPN13	YLR421C	DEF1	P35732	738 aa	Known RBP	5.01	□□□□□ -1.61
RPN13	YLR421C	MSS4	P38994	779 aa		5.01	□□□□□ -1.61
RPN13	YLR421C	MET10	P39692	1035 aa		5.01	□□□□□ -1.61
RPN13	YLR421C	ESC2	Q06340	456 aa		5.01	□□□□□ -1.61
RPN13	YLR421C	MDM38	Q08179	573 aa		5.01	□□□□□ -1.61
RPN13	YLR421C	CHS7	P38843	316 aa		5	□□□□□ -1.61
RPN13	YLR421C	YGR012W	P53206	393 aa		5	□□□□□ -1.61
RPN13	YLR421C	CTF4	Q01454	927 aa		5	□□□□□ -1.61
RPN13	YLR421C	SPO20	Q04359	397 aa		5	□□□□□ -1.61
RPN13	YLR421C	CHA4	P43634	648 aa		4.99	□□□□□ -1.61
RPN13	YLR421C	URN1	Q06525	465 aa	Known RBP	4.99	□□□□□ -1.61
RPN13	YLR421C	CDA1	Q06702	301 aa		4.99	□□□□□ -1.61
RPN13	YLR421C	KCS1	Q12494	1050 aa		4.99	□□□□□ -1.61
RPN13	YLR421C	GIC1	P38785	314 aa		4.98	□□□□□ -1.61
RPN13	YLR421C	IOC3	P43596	787 aa		4.98	□□□□□ -1.61
RPN13	YLR421C	EXG2	P52911	562 aa		4.98	□□□□□ -1.61
RPN13	YLR421C	SRT1	Q03175	343 aa		4.98	□□□□□ -1.61
RPN13	YLR421C	SPE1	P08432	466 aa		4.97	□□□□□ -1.61
RPN13	YLR421C	PFK1	P16861	987 aa	Known RBP	4.97	□□□□□ -1.61
RPN13	YLR421C	ABD1	P32783	436 aa	Predicted RBP	4.97	□□□□□ -1.61
RPN13	YLR421C	MNR2	P35724	969 aa		4.97	□□□□□ -1.61
RPN13	YLR421C	ECM21	P38167	1117 aa	Known RBP	4.97	□□□□□ -1.61
RPN13	YLR421C	SAH1	P39954	449 aa	Known RBP	4.97	□□□□□ -1.61
RPN13	YLR421C	YLL058W	Q12198	575 aa		4.97	□□□□□ -1.61
RPN13	YLR421C	RPP2A	P05319	106 aa	Known RBP	4.96	□□□□□ -1.62
RPN13	YLR421C	HRR25	P29295	494 aa	Known RBP	4.96	□□□□□ -1.62
RPN13	YLR421C	CCC2	P38995	1004 aa		4.96	□□□□□ -1.62
RPN13	YLR421C	FAA4	P47912	694 aa	Known RBP	4.96	□□□□□ -1.62
RPN13	YLR421C	HSF1	P10961	833 aa		4.95	□□□□□ -1.62
RPN13	YLR421C	FUN30	P31380	1131 aa		4.95	□□□□□ -1.62
RPN13	YLR421C	NPP2	P39997	493 aa		4.95	□□□□□ -1.62
RPN13	YLR421C	YGR053C	P53234	283 aa		4.95	□□□□□ -1.62
RPN13	YLR421C	WHI4	Q07655	649 aa	Known RBP	4.95	□□□□□ -1.62

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