RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C BI4P03879 638 aa3.63□□□□□ -1.83
SHE2YKL130C RAD27P26793 382 aa3.63□□□□□ -1.83
SHE2YKL130C MCM2P29469 868 aa3.63□□□□□ -1.83
SHE2YKL130C SLD2P34252 453 aa3.63□□□□□ -1.83
SHE2YKL130C MGE1P38523 228 aa3.63□□□□□ -1.83
SHE2YKL130C ACM1Q08981 209 aa3.63□□□□□ -1.83
SHE2YKL130C RPL11AP0C0W9 174 aaKnown RBP3.62□□□□□ -1.83
SHE2YKL130C ENA1P13587 1091 aa3.62□□□□□ -1.83
SHE2YKL130C DCG1P32460 244 aa3.62□□□□□ -1.83
SHE2YKL130C RER2P35196 286 aa3.62□□□□□ -1.83
SHE2YKL130C POA1P38218 177 aa3.62□□□□□ -1.83
SHE2YKL130C RRT14P40470 206 aa3.62□□□□□ -1.83
SHE2YKL130C MND2P40577 368 aa3.62□□□□□ -1.83
SHE2YKL130C ENA2Q01896 1091 aa3.62□□□□□ -1.83
SHE2YKL130C KIN4Q01919 800 aa3.62□□□□□ -1.83
SHE2YKL130C TPO1Q07824 586 aa3.62□□□□□ -1.83
SHE2YKL130C GNT1Q12096 491 aa3.62□□□□□ -1.83
SHE2YKL130C ENA5Q12691 1091 aa3.62□□□□□ -1.83
SHE2YKL130C RPL11BQ3E757 174 aaPredicted RBP3.62□□□□□ -1.83
SHE2YKL130C RAD53P22216 821 aa3.61□□□□□ -1.83
SHE2YKL130C DEF1P35732 738 aaKnown RBP3.61□□□□□ -1.83
SHE2YKL130C CHS7P38843 316 aa3.61□□□□□ -1.83
SHE2YKL130C MSS4P38994 779 aa3.61□□□□□ -1.83
SHE2YKL130C GEM1P39722 662 aa3.61□□□□□ -1.83
SHE2YKL130C ZRG8P40021 1076 aa3.61□□□□□ -1.83
SHE2YKL130C SIP5P40210 489 aaKnown RBP3.61□□□□□ -1.83
SHE2YKL130C HFM1P51979 1187 aa3.61□□□□□ -1.83
SHE2YKL130C TIF35Q04067 274 aaKnown RBP3.61□□□□□ -1.83
SHE2YKL130C SPP382Q06411 708 aaPredicted RBP3.61□□□□□ -1.83
SHE2YKL130C THS1P04801 734 aaKnown RBP3.6□□□□□ -1.83
SHE2YKL130C DBP2P24783 546 aaKnown RBP3.6□□□□□ -1.83
SHE2YKL130C IOC3P43596 787 aa3.6□□□□□ -1.83
SHE2YKL130C MET12P46151 657 aa3.6□□□□□ -1.83
SHE2YKL130C POL32P47110 350 aa3.6□□□□□ -1.83
SHE2YKL130C SPR28Q04921 423 aa3.6□□□□□ -1.83
SHE2YKL130C HIS5P07172 385 aa3.59□□□□□ -1.83
SHE2YKL130C SLA2P33338 968 aa3.59□□□□□ -1.83
SHE2YKL130C SEN54Q02825 467 aaPredicted RBP3.59□□□□□ -1.83
SHE2YKL130C ADY3Q07732 790 aa3.59□□□□□ -1.83
SHE2YKL130C PFK1P16861 987 aaKnown RBP3.58□□□□□ -1.84
SHE2YKL130C PNT1P38969 423 aa3.58□□□□□ -1.84
SHE2YKL130C XYL2Q07993 356 aa3.58□□□□□ -1.84
SHE2YKL130C AIM39Q08223 395 aa3.58□□□□□ -1.84
SHE2YKL130C RTT10Q08924 1013 aa3.58□□□□□ -1.84
SHE2YKL130C OSW2Q12202 724 aa3.58□□□□□ -1.84
SHE2YKL130C RPP2AP05319 106 aaKnown RBP3.57□□□□□ -1.84
SHE2YKL130C HRR25P29295 494 aaKnown RBP3.57□□□□□ -1.84
SHE2YKL130C FYV10P40492 516 aa3.57□□□□□ -1.84
SHE2YKL130C ESF1Q06344 628 aaKnown RBP3.57□□□□□ -1.84
SHE2YKL130C TMA46Q12000 345 aaKnown RBP3.57□□□□□ -1.84
SHE2YKL130C YML122CQ03207 126 aa3.56□□□□□ -1.84
SHE2YKL130C YML020WQ03722 664 aa3.56□□□□□ -1.84
SHE2YKL130C PPM2Q08282 695 aa3.56□□□□□ -1.84
SHE2YKL130C ATE1P16639 503 aa3.55□□□□□ -1.84
SHE2YKL130C LYP1P32487 611 aa3.55□□□□□ -1.84
SHE2YKL130C MOT2P34909 587 aaKnown RBP3.55□□□□□ -1.84
SHE2YKL130C CHA4P43634 648 aa3.55□□□□□ -1.84
SHE2YKL130C UBA2P52488 636 aa3.55□□□□□ -1.84
SHE2YKL130C EXG2P52911 562 aa3.55□□□□□ -1.84
SHE2YKL130C YGR012WP53206 393 aa3.55□□□□□ -1.84
SHE2YKL130C KCS1Q12494 1050 aa3.55□□□□□ -1.84
SHE2YKL130C TRP2P00899 507 aaKnown RBP3.54□□□□□ -1.84
SHE2YKL130C INO1P11986 533 aa3.54□□□□□ -1.84
SHE2YKL130C SRP101P32916 621 aa3.54□□□□□ -1.84
SHE2YKL130C OAR1P35731 278 aa3.54□□□□□ -1.84
SHE2YKL130C YAP1801P38856 637 aa3.54□□□□□ -1.84
SHE2YKL130C YJR107WP47145 328 aa3.54□□□□□ -1.84
SHE2YKL130C NOP8Q08287 484 aaPredicted RBP3.54□□□□□ -1.84
SHE2YKL130C MOH1P38191 138 aa3.53□□□□□ -1.84
SHE2YKL130C CCC2P38995 1004 aa3.53□□□□□ -1.84
SHE2YKL130C PSP2P50109 593 aaKnown RBP3.53□□□□□ -1.84
SHE2YKL130C MTC3P53077 123 aa3.53□□□□□ -1.84
SHE2YKL130C TYW3P53177 273 aa3.53□□□□□ -1.84
SHE2YKL130C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SHE2YKL130C SPE1P08432 466 aa3.52□□□□□ -1.85
SHE2YKL130C YKL107WP34251 309 aa3.52□□□□□ -1.85
SHE2YKL130C YGL176CP46945 554 aa3.52□□□□□ -1.85
SHE2YKL130C YPL066WQ12194 479 aa3.52□□□□□ -1.85
SHE2YKL130C NPC2Q12408 173 aa3.52□□□□□ -1.85
SHE2YKL130C RKM4Q12504 494 aa3.52□□□□□ -1.85
SHE2YKL130C HSF1P10961 833 aa3.51□□□□□ -1.85
SHE2YKL130C CDA1Q06702 301 aa3.51□□□□□ -1.85
SHE2YKL130C MDM38Q08179 573 aa3.51□□□□□ -1.85
SHE2YKL130C CAD1P24813 409 aaKnown RBP3.5□□□□□ -1.85
SHE2YKL130C PET112P33893 541 aa3.5□□□□□ -1.85
SHE2YKL130C ECM21P38167 1117 aaKnown RBP3.5□□□□□ -1.85
SHE2YKL130C SRT1Q03175 343 aa3.5□□□□□ -1.85
SHE2YKL130C HRQ1Q05549 1077 aa3.5□□□□□ -1.85
SHE2YKL130C ENB1Q08299 606 aa3.5□□□□□ -1.85
SHE2YKL130C FUN30P31380 1131 aa3.49□□□□□ -1.85
SHE2YKL130C EFT1P32324 842 aaKnown RBP3.49□□□□□ -1.85
SHE2YKL130C DUT1P33317 147 aa3.49□□□□□ -1.85
SHE2YKL130C YKL151CP36059 337 aa3.49□□□□□ -1.85
SHE2YKL130C SUL1P38359 859 aa3.49□□□□□ -1.85
SHE2YKL130C SAH1P39954 449 aaKnown RBP3.49□□□□□ -1.85
SHE2YKL130C EEB1Q02891 456 aa3.49□□□□□ -1.85
SHE2YKL130C RMD1Q03441 430 aa3.49□□□□□ -1.85
SHE2YKL130C SPO20Q04359 397 aa3.49□□□□□ -1.85
SHE2YKL130C YLR225CQ05948 407 aaKnown RBP3.49□□□□□ -1.85
SHE2YKL130C YLL058WQ12198 575 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms