RNA–Protein interactions for RNA: YKL046C

DCW1, Transcript of Putative mannosidase, yeast

Gene DCW1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DCW1	YKL046C	TCO89	Q08921	799 aa		13.59	□□□□□ -0.23
DCW1	YKL046C	GFA1	P14742	717 aa	Known RBP	13.58	□□□□□ -0.23
DCW1	YKL046C	SAM2	P19358	384 aa	Known RBP	13.58	□□□□□ -0.23
DCW1	YKL046C	CDC60	P26637	1090 aa	Known RBP	13.58	□□□□□ -0.23
DCW1	YKL046C	SPT21	P35209	758 aa		13.58	□□□□□ -0.23
DCW1	YKL046C	MED8	P38304	223 aa		13.58	□□□□□ -0.23
DCW1	YKL046C	KIC1	P38692	1080 aa		13.58	□□□□□ -0.23
DCW1	YKL046C	YMR124W	P39523	943 aa	Known RBP	13.58	□□□□□ -0.23
DCW1	YKL046C	YJR079W	P47126	109 aa		13.58	□□□□□ -0.23
DCW1	YKL046C	GUP1	P53154	560 aa		13.58	□□□□□ -0.23
DCW1	YKL046C	BTN2	P53286	410 aa		13.58	□□□□□ -0.23
DCW1	YKL046C	YMR114C	Q04471	368 aa	Known RBP	13.58	□□□□□ -0.23
DCW1	YKL046C	MLH2	Q07980	695 aa		13.58	□□□□□ -0.23
DCW1	YKL046C	FKS1	P38631	1876 aa	Known RBP	13.58	□□□□□ -0.24
DCW1	YKL046C	CDC8	P00572	216 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	APL1	P27351	700 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	GLN1	P32288	370 aa	Known RBP	13.58	□□□□□ -0.24
DCW1	YKL046C	XRS2	P33301	854 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	VPS45	P38932	577 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	MAD1	P40957	749 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	MMM1	P41800	426 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	ROG3	P43602	733 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	BUL2	Q03758	920 aa	Known RBP	13.58	□□□□□ -0.24
DCW1	YKL046C	VTI1	Q04338	217 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	YDL057W	Q07379	328 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	RUD3	Q12234	484 aa	Known RBP	13.58	□□□□□ -0.24
DCW1	YKL046C	GRX6	Q12438	231 aa		13.58	□□□□□ -0.24
DCW1	YKL046C	RAM2	P29703	316 aa		13.57	□□□□□ -0.24
DCW1	YKL046C	GCG1	P32656	232 aa	Known RBP	13.57	□□□□□ -0.24
DCW1	YKL046C	ERT1	P38140	529 aa		13.57	□□□□□ -0.24
DCW1	YKL046C	TDA3	P38758	523 aa		13.57	□□□□□ -0.24
DCW1	YKL046C	CWC22	P53333	577 aa	Known RBP	13.57	□□□□□ -0.24
DCW1	YKL046C	RPL8A	P17076	256 aa	Known RBP	13.56	□□□□□ -0.24
DCW1	YKL046C	SRO9	P25567	434 aa	Known RBP	13.56	□□□□□ -0.24
DCW1	YKL046C	SLD2	P34252	453 aa		13.56	□□□□□ -0.24
DCW1	YKL046C	UBP9	P39967	754 aa		13.56	□□□□□ -0.24
DCW1	YKL046C	MSN5	P52918	1224 aa		13.56	□□□□□ -0.24
DCW1	YKL046C	URH1	Q04179	340 aa		13.56	□□□□□ -0.24
DCW1	YKL046C	YLH47	Q06493	454 aa		13.56	□□□□□ -0.24
DCW1	YKL046C	ERG11	P10614	530 aa		13.55	□□□□□ -0.24
DCW1	YKL046C	TRK2	P28584	889 aa		13.55	□□□□□ -0.24
DCW1	YKL046C	PIH1	P38768	344 aa		13.55	□□□□□ -0.24
DCW1	YKL046C	NUP82	P40368	713 aa		13.55	□□□□□ -0.24
DCW1	YKL046C	YJL171C	P46992	396 aa		13.55	□□□□□ -0.24
DCW1	YKL046C	NBP1	P52919	319 aa	Predicted RBP	13.55	□□□□□ -0.24
DCW1	YKL046C	DIG1	Q03063	452 aa	Known RBP	13.55	□□□□□ -0.24
DCW1	YKL046C	YDL124W	Q07551	312 aa	Known RBP	13.55	□□□□□ -0.24
DCW1	YKL046C	DAL7	P21826	554 aa		13.54	□□□□□ -0.24
DCW1	YKL046C	SMC1	P32908	1225 aa		13.54	□□□□□ -0.24
DCW1	YKL046C	JNM1	P36224	373 aa		13.54	□□□□□ -0.24
DCW1	YKL046C	SIP3	P38717	1229 aa		13.54	□□□□□ -0.24
DCW1	YKL046C	PAN5	P38787	379 aa		13.54	□□□□□ -0.24
DCW1	YKL046C	MFM1	Q02783	413 aa		13.54	□□□□□ -0.24
DCW1	YKL046C	FUS2	Q05670	677 aa		13.54	□□□□□ -0.24
DCW1	YKL046C	YPR078C	Q06813	372 aa		13.54	□□□□□ -0.24
DCW1	YKL046C	LAS1	P36146	502 aa	Predicted RBP	13.53	□□□□□ -0.24
DCW1	YKL046C	NDT80	P38830	627 aa		13.53	□□□□□ -0.24
DCW1	YKL046C	STE23	Q06010	1027 aa		13.53	□□□□□ -0.24
DCW1	YKL046C	OXR1	Q08952	273 aa		13.53	□□□□□ -0.24
DCW1	YKL046C	RRG1	Q12167	365 aa	Predicted RBP	13.53	□□□□□ -0.24
DCW1	YKL046C	ILV1	P00927	576 aa	Known RBP	13.52	□□□□□ -0.25
DCW1	YKL046C	PFK1	P16861	987 aa	Known RBP	13.52	□□□□□ -0.25
DCW1	YKL046C	NIP100	P33420	868 aa		13.52	□□□□□ -0.25
DCW1	YKL046C	YBL086C	P38177	466 aa		13.52	□□□□□ -0.25
DCW1	YKL046C	SUL1	P38359	859 aa		13.52	□□□□□ -0.25
DCW1	YKL046C	BRE2	P43132	505 aa		13.52	□□□□□ -0.25
DCW1	YKL046C	PGA2	P53903	129 aa		13.52	□□□□□ -0.25
DCW1	YKL046C	DPL1	Q05567	589 aa		13.52	□□□□□ -0.25
DCW1	YKL046C	FAL1	Q12099	399 aa	Known RBP	13.52	□□□□□ -0.25
DCW1	YKL046C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	13.51	□□□□□ -0.25	not detected
DCW1	YKL046C	KIN1	P13185	1064 aa		13.51	□□□□□ -0.25
DCW1	YKL046C	SEC20	P28791	383 aa		13.51	□□□□□ -0.25
DCW1	YKL046C	MCD4	P36051	919 aa		13.51	□□□□□ -0.25
DCW1	YKL046C	ISW1	P38144	1129 aa		13.51	□□□□□ -0.25
DCW1	YKL046C	TOF1	P53840	1238 aa		13.51	□□□□□ -0.25
DCW1	YKL046C	KTR2	P33550	425 aa		13.5	□□□□□ -0.25
DCW1	YKL046C	YFL034W	P43564	1073 aa		13.5	□□□□□ -0.25
DCW1	YKL046C	KAP114	P53067	1004 aa		13.5	□□□□□ -0.25
DCW1	YKL046C	LSB1	P53281	241 aa		13.5	□□□□□ -0.25
DCW1	YKL046C	UTP4	Q06679	776 aa	Known RBP	13.5	□□□□□ -0.25
DCW1	YKL046C	AFG2	P32794	780 aa		13.49	□□□□□ -0.25
DCW1	YKL046C	CST26	P38226	397 aa		13.49	□□□□□ -0.25
DCW1	YKL046C	GTT3	P39996	337 aa		13.49	□□□□□ -0.25
DCW1	YKL046C	UTP14	Q04500	899 aa	Known RBP	13.49	□□□□□ -0.25
DCW1	YKL046C	MED1	Q12321	566 aa		13.49	□□□□□ -0.25
DCW1	YKL046C	SDS3	P40505	327 aa		13.48	□□□□□ -0.25
DCW1	YKL046C	YGR021W	P53212	290 aa		13.48	□□□□□ -0.25
DCW1	YKL046C	SEC5	P89102	971 aa		13.48	□□□□□ -0.25
DCW1	YKL046C	ECI1	Q05871	280 aa		13.48	□□□□□ -0.25
DCW1	YKL046C	YPL225W	Q08971	146 aa	Known RBP	13.48	□□□□□ -0.25
DCW1	YKL046C	TRP2	P00899	507 aa	Known RBP	13.47	□□□□□ -0.25
DCW1	YKL046C	ICL1	P28240	557 aa	Predicted RBP	13.47	□□□□□ -0.25
DCW1	YKL046C	YBL028C	P38202	106 aa		13.47	□□□□□ -0.25
DCW1	YKL046C	ULP2	P40537	1034 aa	Predicted RBP	13.47	□□□□□ -0.25
DCW1	YKL046C	YNL320W	P42840	284 aa		13.47	□□□□□ -0.25
DCW1	YKL046C	ORC4	P54791	529 aa		13.47	□□□□□ -0.25
DCW1	YKL046C	ADP1	P25371	1049 aa		13.46	□□□□□ -0.25
DCW1	YKL046C	SEC8	P32855	1065 aa		13.46	□□□□□ -0.25
DCW1	YKL046C	YEL1	P34225	687 aa		13.46	□□□□□ -0.25
DCW1	YKL046C	YKL222C	P35995	705 aa		13.46	□□□□□ -0.25

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms