RNA–Protein interactions for RNA: ENST00000641536.1

CCDC196-209, Transcript of coiled-coil domain containing 196, humanhuman

Gene CCDC196, Length 1,483 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-209ENST00000641536 IGSF1Q8N6C5 1336 aa9.54□□□□□ -0.88
CCDC196-209ENST00000641536 KDRP35968 1356 aa9.54□□□□□ -0.88
CCDC196-209ENST00000641536 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
CCDC196-209ENST00000641536 LCE2DQ5TA82 110 aaPredicted RBP9.53□□□□□ -0.88
CCDC196-209ENST00000641536 IFNL2Q8IZJ0 200 aa9.53□□□□□ -0.88
CCDC196-209ENST00000641536 PCDHB13Q9Y5F0 798 aa9.53□□□□□ -0.88
CCDC196-209ENST00000641536 CLSPNQ9HAW4 1339 aa9.53□□□□□ -0.88
CCDC196-209ENST00000641536 ZNF831Q5JPB2 1677 aa9.53□□□□□ -0.88
CCDC196-209ENST00000641536 ZNF530Q6P9A1 599 aaPredicted RBP9.53□□□□□ -0.88
CCDC196-209ENST00000641536 MORC1Q86VD1 984 aa9.53□□□□□ -0.88
CCDC196-209ENST00000641536 SMARCC1Q92922 1105 aaPredicted RBP9.53□□□□□ -0.88
CCDC196-209ENST00000641536 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
CCDC196-209ENST00000641536 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.88
CCDC196-209ENST00000641536 ADAMTS7Q9UKP4 1686 aa9.52□□□□□ -0.89
CCDC196-209ENST00000641536 SENP3-EIF4A1A0A087X0R7 540 aa9.52□□□□□ -0.89
CCDC196-209ENST00000641536 MAP3K13O43283 966 aa9.52□□□□□ -0.89
CCDC196-209ENST00000641536 ZNF526Q8TF50 670 aaPredicted RBP9.52□□□□□ -0.89
CCDC196-209ENST00000641536 ATP10DQ9P241 1426 aa9.51□□□□□ -0.89
CCDC196-209ENST00000641536 SULT6B1Q6IMI4 303 aa9.51□□□□□ -0.89
CCDC196-209ENST00000641536 PHF12Q96QT6 1004 aa9.51□□□□□ -0.89
CCDC196-209ENST00000641536 DAXXQ9UER7 740 aaPredicted RBP9.51□□□□□ -0.89
CCDC196-209ENST00000641536 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
CCDC196-209ENST00000641536 KIF7Q2M1P5 1343 aa9.51□□□□□ -0.89
CCDC196-209ENST00000641536 CACNA1SQ13698 1873 aa9.5□□□□□ -0.89
CCDC196-209ENST00000641536 CCDC88AQ3V6T2 1871 aa9.5□□□□□ -0.89
CCDC196-209ENST00000641536 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.5□□□□□ -0.89
CCDC196-209ENST00000641536 STK25O00506 426 aa9.5□□□□□ -0.89
CCDC196-209ENST00000641536 PDAP1Q13442 181 aaKnown RBP9.5□□□□□ -0.89
CCDC196-209ENST00000641536 ZFP91Q96JP5 570 aaPredicted RBP9.5□□□□□ -0.89
CCDC196-209ENST00000641536 UBR2Q8IWV8 1755 aa9.49□□□□□ -0.89
CCDC196-209ENST00000641536 ARFGEF1Q9Y6D6 1849 aa9.49□□□□□ -0.89
CCDC196-209ENST00000641536 PTCD1O75127 700 aaKnown RBP9.49□□□□□ -0.89
CCDC196-209ENST00000641536 MMP10P09238 476 aa9.49□□□□□ -0.89
CCDC196-209ENST00000641536 HMOX1P09601 288 aa9.49□□□□□ -0.89
CCDC196-209ENST00000641536 SSFA2P28290 1259 aa9.49□□□□□ -0.89
CCDC196-209ENST00000641536 C1QTNF8P60827 252 aa9.49□□□□□ -0.89
CCDC196-209ENST00000641536 PLCB2Q00722 1185 aa9.49□□□□□ -0.89
CCDC196-209ENST00000641536 CC2D1BQ5T0F9 858 aaKnown RBP9.49□□□□□ -0.89
CCDC196-209ENST00000641536 FLAD1Q8NFF5 587 aa9.49□□□□□ -0.89
CCDC196-209ENST00000641536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCDC196-209ENST00000641536 PXDNLA1KZ92 1463 aa9.49□□□□□ -0.89
CCDC196-209ENST00000641536 SIPA1L3O60292 1781 aaPredicted RBP9.49□□□□□ -0.89
CCDC196-209ENST00000641536 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
CCDC196-209ENST00000641536 IL13P35225 146 aa9.48□□□□□ -0.89
CCDC196-209ENST00000641536 CABP4P57796 275 aa9.48□□□□□ -0.89
CCDC196-209ENST00000641536 PLEKHO1Q53GL0 409 aaPredicted RBP9.48□□□□□ -0.89
CCDC196-209ENST00000641536 SRP68Q9UHB9 627 aaKnown RBP9.48□□□□□ -0.89
CCDC196-209ENST00000641536 KNSTRNQ9Y448 316 aa9.48□□□□□ -0.89
CCDC196-209ENST00000641536 CD2APQ9Y5K6 639 aa9.48□□□□□ -0.89
CCDC196-209ENST00000641536 SBF1O95248 1867 aa9.48□□□□□ -0.89
CCDC196-209ENST00000641536 MTHFSP49914 203 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 IFNL1Q8IU54 200 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 ARHGEF1Q92888 912 aaKnown RBP9.47□□□□□ -0.89
CCDC196-209ENST00000641536 DCAF5Q96JK2 942 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 KCPQ6ZWJ8 1503 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 PCNTO95613 3336 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 C10orf71Q711Q0 1435 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 ADCY9O60503 1353 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 SLC39A6Q13433 755 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 LGR6Q9HBX8 967 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 RTCBQ9Y3I0 505 aaKnown RBP9.47□□□□□ -0.89
CCDC196-209ENST00000641536 STK24Q9Y6E0 443 aa9.47□□□□□ -0.89
CCDC196-209ENST00000641536 COL3A1P02461 1466 aaPredicted RBP9.46□□□□□ -0.9
CCDC196-209ENST00000641536 A0A0G2JLW4 131 aa9.46□□□□□ -0.9
CCDC196-209ENST00000641536 ERVV-2B6SEH9 535 aa9.46□□□□□ -0.9
CCDC196-209ENST00000641536 GRIN3BO60391 1043 aa9.46□□□□□ -0.9
CCDC196-209ENST00000641536 GYS1P13807 737 aa9.46□□□□□ -0.9
CCDC196-209ENST00000641536 PSEN1P49768 467 aa9.46□□□□□ -0.9
CCDC196-209ENST00000641536 C1orf141Q5JVX7 400 aa9.46□□□□□ -0.9
CCDC196-209ENST00000641536 MRC1P22897 1456 aa9.45□□□□□ -0.9
CCDC196-209ENST00000641536 ANKRD31Q8N7Z5 1873 aa9.45□□□□□ -0.9
CCDC196-209ENST00000641536 DLEC1Q9Y238 1755 aa9.45□□□□□ -0.9
CCDC196-209ENST00000641536 CNTNAP4Q9C0A0 1308 aa9.45□□□□□ -0.9
CCDC196-209ENST00000641536 CRKLP46109 303 aaKnown RBP9.45□□□□□ -0.9
CCDC196-209ENST00000641536 TRAPPC3LQ5T215 181 aa9.45□□□□□ -0.9
CCDC196-209ENST00000641536 DLG5Q8TDM6 1919 aa9.45□□□□□ -0.9
CCDC196-209ENST00000641536 HSP90AB1P08238 724 aaKnown RBP9.44□□□□□ -0.9
CCDC196-209ENST00000641536 DPEP1P16444 411 aa9.44□□□□□ -0.9
CCDC196-209ENST00000641536 DDR1Q08345 913 aa9.44□□□□□ -0.9
CCDC196-209ENST00000641536 AMOTQ4VCS5 1084 aa9.44□□□□□ -0.9
CCDC196-209ENST00000641536 DNAJC10Q8IXB1 793 aa9.44□□□□□ -0.9
CCDC196-209ENST00000641536 BCS1LQ9Y276 419 aa9.44□□□□□ -0.9
CCDC196-209ENST00000641536 COL11A2P13942 1736 aaPredicted RBP9.44□□□□□ -0.9
CCDC196-209ENST00000641536 RFC4P35249 363 aa9.43□□□□□ -0.9
CCDC196-209ENST00000641536 MTHFSDQ2M296 383 aaKnown RBP9.43□□□□□ -0.9
CCDC196-209ENST00000641536 NRXN2Q9P2S2 1712 aa9.42□□□□□ -0.9
CCDC196-209ENST00000641536 SCN7AQ01118 1682 aa9.42□□□□□ -0.9
CCDC196-209ENST00000641536 PER1O15534 1290 aaPredicted RBP9.42□□□□□ -0.9
CCDC196-209ENST00000641536 RNMTO43148 476 aaKnown RBP9.42□□□□□ -0.9
CCDC196-209ENST00000641536 RPS6KA4O75676 772 aa9.42□□□□□ -0.9
CCDC196-209ENST00000641536 CHRNA5P30532 468 aa9.42□□□□□ -0.9
CCDC196-209ENST00000641536 INTS5Q6P9B9 1019 aaKnown RBP9.42□□□□□ -0.9
CCDC196-209ENST00000641536 PAXIP1Q6ZW49 1069 aaPredicted RBP9.42□□□□□ -0.9
CCDC196-209ENST00000641536 SPRYD3Q8NCJ5 442 aa9.42□□□□□ -0.9
CCDC196-209ENST00000641536 GPBP1L1Q9HC44 474 aaPredicted RBP9.42□□□□□ -0.9
CCDC196-209ENST00000641536 PLEKHG2Q9H7P9 1386 aa9.42□□□□□ -0.9
CCDC196-209ENST00000641536 TIAM2Q8IVF5 1701 aa9.42□□□□□ -0.9
CCDC196-209ENST00000641536 USP42Q9H9J4 1324 aaKnown RBP9.42□□□□□ -0.9
CCDC196-209ENST00000641536 U2SURPO15042 1029 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms