RNA–Protein interactions for RNA: ENST00000641411.1

CASC19-227, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-227ENST00000641411 RNF17Q9BXT8 1623 aaKnown RBP10.64□□□□□ -0.71
CASC19-227ENST00000641411 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
CASC19-227ENST00000641411 SCAPERQ9BY12 1400 aa10.64□□□□□ -0.71
CASC19-227ENST00000641411 KIDINS220Q9ULH0 1771 aa10.64□□□□□ -0.71
CASC19-227ENST00000641411 ARID4BQ4LE39 1312 aaPredicted RBP10.63□□□□□ -0.71
CASC19-227ENST00000641411 CCER2I3L3R5 266 aa10.63□□□□□ -0.71
CASC19-227ENST00000641411 PPP2R2DQ66LE6 453 aa10.63□□□□□ -0.71
CASC19-227ENST00000641411 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.63□□□□□ -0.71
CASC19-227ENST00000641411 DHX29Q7Z478 1369 aaKnown RBP10.63□□□□□ -0.71
CASC19-227ENST00000641411 TRPM2O94759 1503 aa10.63□□□□□ -0.71
CASC19-227ENST00000641411 LMTK2Q8IWU2 1503 aa10.63□□□□□ -0.71
CASC19-227ENST00000641411 MLH3Q9UHC1 1453 aa10.62□□□□□ -0.71
CASC19-227ENST00000641411 PTPRTO14522 1441 aa10.62□□□□□ -0.71
CASC19-227ENST00000641411 CD109Q6YHK3 1445 aa10.62□□□□□ -0.71
CASC19-227ENST00000641411 POGZQ7Z3K3 1410 aa10.62□□□□□ -0.71
CASC19-227ENST00000641411 SLC10A4Q96EP9 437 aa10.62□□□□□ -0.71
CASC19-227ENST00000641411 E9PCH4 1651 aa10.62□□□□□ -0.71
CASC19-227ENST00000641411 MAP3K4Q9Y6R4 1608 aa10.62□□□□□ -0.71
CASC19-227ENST00000641411 SPHKAPQ2M3C7 1700 aa10.61□□□□□ -0.71
CASC19-227ENST00000641411 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
CASC19-227ENST00000641411 DDX10Q13206 875 aaKnown RBP10.61□□□□□ -0.71
CASC19-227ENST00000641411 SKIV2LQ15477 1246 aaKnown RBP10.61□□□□□ -0.71
CASC19-227ENST00000641411 GPSM3Q9Y4H4 160 aa10.61□□□□□ -0.71
CASC19-227ENST00000641411 TRPM1Q7Z4N2 1603 aa10.61□□□□□ -0.71
CASC19-227ENST00000641411 MROH1Q8NDA8 1641 aa10.61□□□□□ -0.71
CASC19-227ENST00000641411 HECW2Q9P2P5 1572 aa10.6□□□□□ -0.71
CASC19-227ENST00000641411 CNTLNQ9NXG0 1405 aa10.6□□□□□ -0.71
CASC19-227ENST00000641411 SLC35F4A4IF30 521 aa10.6□□□□□ -0.71
CASC19-227ENST00000641411 SH3D19Q5HYK7 790 aa10.6□□□□□ -0.71
CASC19-227ENST00000641411 INTS6LQ5JSJ4 861 aaKnown RBP10.6□□□□□ -0.71
CASC19-227ENST00000641411 CEP152O94986 1710 aa10.6□□□□□ -0.71
CASC19-227ENST00000641411 KANK1Q14678 1352 aa10.6□□□□□ -0.71
CASC19-227ENST00000641411 CCDC7Q96M83 1385 aa10.6□□□□□ -0.71
CASC19-227ENST00000641411 LOC100996750A0A140TA64 210 aa10.59□□□□□ -0.71
CASC19-227ENST00000641411 NR6A1Q15406 480 aa10.59□□□□□ -0.71
CASC19-227ENST00000641411 CCDC155Q8N6L0 562 aa10.59□□□□□ -0.71
CASC19-227ENST00000641411 KRTAP4-6Q9BYQ5 205 aa10.59□□□□□ -0.71
CASC19-227ENST00000641411 GPRASP1Q5JY77 1395 aa10.59□□□□□ -0.71
CASC19-227ENST00000641411 WASHC2AQ641Q2 1341 aa10.58□□□□□ -0.71
CASC19-227ENST00000641411 PRAG1Q86YV5 1406 aa10.58□□□□□ -0.72
CASC19-227ENST00000641411 A2MP01023 1474 aa10.58□□□□□ -0.72
CASC19-227ENST00000641411 ANP32CO43423 234 aa10.58□□□□□ -0.72
CASC19-227ENST00000641411 AFAP1Q8N556 730 aa10.58□□□□□ -0.72
CASC19-227ENST00000641411 RIMBP3CA6NJZ7 1639 aa10.58□□□□□ -0.72
CASC19-227ENST00000641411 RIMBP3BA6NNM3 1639 aa10.58□□□□□ -0.72
CASC19-227ENST00000641411 RIMBP3Q9UFD9 1639 aa10.58□□□□□ -0.72
CASC19-227ENST00000641411 USP47Q96K76 1375 aa10.57□□□□□ -0.72
CASC19-227ENST00000641411 FIGNL2A6NMB9 653 aa10.57□□□□□ -0.72
CASC19-227ENST00000641411 ZBTB33Q86T24 672 aa10.57□□□□□ -0.72
CASC19-227ENST00000641411 CNTNAP3BQ96NU0 1288 aa10.57□□□□□ -0.72
CASC19-227ENST00000641411 CNTNAP3Q9BZ76 1288 aa10.57□□□□□ -0.72
CASC19-227ENST00000641411 EFCAB6Q5THR3 1501 aa10.57□□□□□ -0.72
CASC19-227ENST00000641411 ROCK2O75116 1388 aaKnown RBP10.56□□□□□ -0.72
CASC19-227ENST00000641411 PTK2Q05397 1052 aa10.56□□□□□ -0.72
CASC19-227ENST00000641411 COL25A1Q9BXS0 654 aaPredicted RBP10.56□□□□□ -0.72
CASC19-227ENST00000641411 RICTORQ6R327 1708 aa10.55□□□□□ -0.72
CASC19-227ENST00000641411 RNF225M0QZC1 329 aaPredicted RBP10.55□□□□□ -0.72
CASC19-227ENST00000641411 ITGA6P23229 1130 aa10.55□□□□□ -0.72
CASC19-227ENST00000641411 CTSOP43234 321 aaPredicted RBP10.55□□□□□ -0.72
CASC19-227ENST00000641411 PROCA1Q8NCQ7 364 aaPredicted RBP10.55□□□□□ -0.72
CASC19-227ENST00000641411 ADAM32Q8TC27 787 aa10.55□□□□□ -0.72
CASC19-227ENST00000641411 FRMPD1Q5SYB0 1578 aa10.55□□□□□ -0.72
CASC19-227ENST00000641411 KIAA1210Q9ULL0 1709 aa10.55□□□□□ -0.72
CASC19-227ENST00000641411 SLURP2P0DP57 97 aa10.54□□□□□ -0.72
CASC19-227ENST00000641411 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
CASC19-227ENST00000641411 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
CASC19-227ENST00000641411 HIRIP3Q9BW71 556 aaPredicted RBP10.54□□□□□ -0.72
CASC19-227ENST00000641411 CLTCL1P53675 1640 aa10.54□□□□□ -0.72
CASC19-227ENST00000641411 ZMYM4Q5VZL5 1548 aa10.53□□□□□ -0.72
CASC19-227ENST00000641411 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
CASC19-227ENST00000641411 NBPF20Q3BBV1 942 aa10.53□□□□□ -0.72
CASC19-227ENST00000641411 RNF217Q8TC41 542 aa10.53□□□□□ -0.72
CASC19-227ENST00000641411 INSM2Q96T92 566 aaPredicted RBP10.53□□□□□ -0.72
CASC19-227ENST00000641411 ABCA6Q8N139 1617 aa10.53□□□□□ -0.72
CASC19-227ENST00000641411 ZC3H13Q5T200 1668 aaKnown RBP10.53□□□□□ -0.72
CASC19-227ENST00000641411 KIF7Q2M1P5 1343 aa10.53□□□□□ -0.72
CASC19-227ENST00000641411 MADDQ8WXG6 1647 aa10.52□□□□□ -0.73
CASC19-227ENST00000641411 ZNF385CQ66K41 422 aaPredicted RBP10.52□□□□□ -0.73
CASC19-227ENST00000641411 KDF1Q8NAX2 398 aaPredicted RBP10.52□□□□□ -0.73
CASC19-227ENST00000641411 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
CASC19-227ENST00000641411 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
CASC19-227ENST00000641411 PPRC1Q5VV67 1664 aaKnown RBP10.52□□□□□ -0.73
CASC19-227ENST00000641411 DIP2BQ9P265 1576 aa10.52□□□□□ -0.73
CASC19-227ENST00000641411 DIP2CQ9Y2E4 1556 aa10.52□□□□□ -0.73
CASC19-227ENST00000641411 LILRA1O75019 489 aa10.51□□□□□ -0.73
CASC19-227ENST00000641411 RELBQ01201 579 aa10.51□□□□□ -0.73
CASC19-227ENST00000641411 EPS8L1Q8TE68 723 aa10.51□□□□□ -0.73
CASC19-227ENST00000641411 DCAF11Q8TEB1 546 aa10.51□□□□□ -0.73
CASC19-227ENST00000641411 FAM117AQ9C073 453 aa10.51□□□□□ -0.73
CASC19-227ENST00000641411 KDM4CQ9H3R0 1056 aa10.51□□□□□ -0.73
CASC19-227ENST00000641411 KIF1BO60333 1816 aa10.51□□□□□ -0.73
CASC19-227ENST00000641411 MYOM2P54296 1465 aa10.5□□□□□ -0.73
CASC19-227ENST00000641411 ESPNB1AK53 854 aa10.5□□□□□ -0.73
CASC19-227ENST00000641411 ADH1AP07327 375 aa10.5□□□□□ -0.73
CASC19-227ENST00000641411 ZNF784Q8NCA9 323 aaPredicted RBP10.5□□□□□ -0.73
CASC19-227ENST00000641411 YTHDC1Q96MU7 727 aaKnown RBP10.5□□□□□ -0.73
CASC19-227ENST00000641411 CARD11Q9BXL7 1154 aa10.5□□□□□ -0.73
CASC19-227ENST00000641411 HMX1Q9NP08 348 aaPredicted RBP10.5□□□□□ -0.73
CASC19-227ENST00000641411 REREQ9P2R6 1566 aa10.5□□□□□ -0.73
CASC19-227ENST00000641411 IFT172Q9UG01 1749 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms