RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 C5P01031 1676 aa12.16□□□□□ -0.46
PHGDH-215ENST00000641371 SPATA31A5Q5VU36 1347 aa12.16□□□□□ -0.46
PHGDH-215ENST00000641371 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
PHGDH-215ENST00000641371 KSR2Q6VAB6 950 aa12.16□□□□□ -0.46
PHGDH-215ENST00000641371 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
PHGDH-215ENST00000641371 ZNF496Q96IT1 587 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-215ENST00000641371 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
PHGDH-215ENST00000641371 ADAMTS2O95450 1211 aa12.15□□□□□ -0.46
PHGDH-215ENST00000641371 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
PHGDH-215ENST00000641371 FAM161AQ3B820 660 aa12.15□□□□□ -0.46
PHGDH-215ENST00000641371 UNC5CLQ8IV45 518 aa12.15□□□□□ -0.46
PHGDH-215ENST00000641371 RBM19Q9Y4C8 960 aaKnown RBP12.15□□□□□ -0.46
PHGDH-215ENST00000641371 ITGB4P16144 1822 aa12.15□□□□□ -0.46
PHGDH-215ENST00000641371 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
PHGDH-215ENST00000641371 UBTFL1P0CB47 393 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-215ENST00000641371 NUCB1Q02818 461 aa12.14□□□□□ -0.47
PHGDH-215ENST00000641371 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
PHGDH-215ENST00000641371 VPS72Q15906 364 aa12.14□□□□□ -0.47
PHGDH-215ENST00000641371 DDB1Q16531 1140 aa12.14□□□□□ -0.47
PHGDH-215ENST00000641371 CEP85Q6P2H3 762 aa12.14□□□□□ -0.47
PHGDH-215ENST00000641371 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
PHGDH-215ENST00000641371 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
PHGDH-215ENST00000641371 KCPQ6ZWJ8 1503 aa12.14□□□□□ -0.47
PHGDH-215ENST00000641371 GLI3P10071 1580 aa12.13□□□□□ -0.47
PHGDH-215ENST00000641371 PI4KAP2A4QPH2 592 aa12.13□□□□□ -0.47
PHGDH-215ENST00000641371 F6X3S4 739 aa12.13□□□□□ -0.47
PHGDH-215ENST00000641371 PDE4AP27815 886 aa12.13□□□□□ -0.47
PHGDH-215ENST00000641371 FNBP4Q8N3X1 1017 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-215ENST00000641371 PI4KAP1Q8N8J0 262 aa12.13□□□□□ -0.47
PHGDH-215ENST00000641371 LINS1Q8NG48 757 aa12.13□□□□□ -0.47
PHGDH-215ENST00000641371 MEIS3Q99687 375 aa12.13□□□□□ -0.47
PHGDH-215ENST00000641371 BACH2Q9BYV9 841 aa12.13□□□□□ -0.47
PHGDH-215ENST00000641371 DCTPP1Q9H773 170 aa12.13□□□□□ -0.47
PHGDH-215ENST00000641371 PHAXQ9H814 394 aaKnown RBP12.13□□□□□ -0.47
PHGDH-215ENST00000641371 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-215ENST00000641371 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-215ENST00000641371 RGS3P49796 1198 aa12.12□□□□□ -0.47
PHGDH-215ENST00000641371 BEND3Q5T5X7 828 aa12.12□□□□□ -0.47
PHGDH-215ENST00000641371 CHD1LQ86WJ1 897 aa12.12□□□□□ -0.47
PHGDH-215ENST00000641371 NUTM2AQ8IVF1 878 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-215ENST00000641371 ADCY9O60503 1353 aa12.12□□□□□ -0.47
PHGDH-215ENST00000641371 BCL9O00512 1426 aa12.11□□□□□ -0.47
PHGDH-215ENST00000641371 STARD3NLO95772 234 aa12.11□□□□□ -0.47
PHGDH-215ENST00000641371 PDIA6Q15084 440 aa12.11□□□□□ -0.47
PHGDH-215ENST00000641371 HSP90AB4PQ58FF6 505 aa12.11□□□□□ -0.47
PHGDH-215ENST00000641371 RIC3Q7Z5B4 369 aa12.11□□□□□ -0.47
PHGDH-215ENST00000641371 NGLY1Q96IV0 654 aa12.11□□□□□ -0.47
PHGDH-215ENST00000641371 CICQ96RK0 1608 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-215ENST00000641371 COL15A1P39059 1388 aa12.1□□□□□ -0.47
PHGDH-215ENST00000641371 ATP8B2P98198 1209 aa12.1□□□□□ -0.47
PHGDH-215ENST00000641371 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
PHGDH-215ENST00000641371 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
PHGDH-215ENST00000641371 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
PHGDH-215ENST00000641371 UTYO14607 1347 aa12.1□□□□□ -0.47
PHGDH-215ENST00000641371 DOT1LQ8TEK3 1739 aa12.09□□□□□ -0.47
PHGDH-215ENST00000641371 RAB11FIP3O75154 756 aa12.09□□□□□ -0.47
PHGDH-215ENST00000641371 ANP32AP39687 249 aaKnown RBP12.09□□□□□ -0.47
PHGDH-215ENST00000641371 ANKRD45Q5TZF3 282 aa12.09□□□□□ -0.47
PHGDH-215ENST00000641371 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
PHGDH-215ENST00000641371 SIRT2Q8IXJ6 389 aa12.09□□□□□ -0.47
PHGDH-215ENST00000641371 PLBD2Q8NHP8 589 aa12.09□□□□□ -0.47
PHGDH-215ENST00000641371 SMARCC1Q92922 1105 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-215ENST00000641371 METTL22Q9BUU2 404 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-215ENST00000641371 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
PHGDH-215ENST00000641371 C9orf78Q9NZ63 289 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-215ENST00000641371 ARFGEF2Q9Y6D5 1785 aa12.08□□□□□ -0.48
PHGDH-215ENST00000641371 ZNF831Q5JPB2 1677 aa12.08□□□□□ -0.48
PHGDH-215ENST00000641371 MTX1Q13505 466 aa12.08□□□□□ -0.48
PHGDH-215ENST00000641371 XAGE3Q8WTP9 111 aa12.08□□□□□ -0.48
PHGDH-215ENST00000641371 PIGBQ92521 554 aa12.08□□□□□ -0.48
PHGDH-215ENST00000641371 USP16Q9Y5T5 823 aa12.08□□□□□ -0.48
PHGDH-215ENST00000641371 BCL9LQ86UU0 1499 aa12.08□□□□□ -0.48
PHGDH-215ENST00000641371 KAT6BQ8WYB5 2073 aa12.07□□□□□ -0.48
PHGDH-215ENST00000641371 GRM8O00222 908 aa12.07□□□□□ -0.48
PHGDH-215ENST00000641371 HMGB2P26583 209 aaKnown RBP12.07□□□□□ -0.48
PHGDH-215ENST00000641371 PROSER3Q2NL68 480 aa12.07□□□□□ -0.48
PHGDH-215ENST00000641371 COPS6Q7L5N1 327 aa12.07□□□□□ -0.48
PHGDH-215ENST00000641371 LRP10Q7Z4F1 713 aa12.07□□□□□ -0.48
PHGDH-215ENST00000641371 SSH3Q8TE77 659 aa12.07□□□□□ -0.48
PHGDH-215ENST00000641371 C8orf37Q96NL8 207 aa12.07□□□□□ -0.48
PHGDH-215ENST00000641371 UPF2Q9HAU5 1272 aaKnown RBP12.07□□□□□ -0.48
PHGDH-215ENST00000641371 PRAMEF22A3QJZ6 481 aa12.06□□□□□ -0.48
PHGDH-215ENST00000641371 MYL6BP14649 208 aa12.06□□□□□ -0.48
PHGDH-215ENST00000641371 BMP2KLQ5H9B9 411 aa12.06□□□□□ -0.48
PHGDH-215ENST00000641371 MEX3CQ5U5Q3 659 aaKnown RBP12.06□□□□□ -0.48
PHGDH-215ENST00000641371 ATG3Q9NT62 314 aa12.06□□□□□ -0.48
PHGDH-215ENST00000641371 USP21Q9UK80 565 aa12.06□□□□□ -0.48
PHGDH-215ENST00000641371 LRRFIP2Q9Y608 721 aaKnown RBP12.06□□□□□ -0.48
PHGDH-215ENST00000641371 AFDNP55196 1824 aaKnown RBP12.06□□□□□ -0.48
PHGDH-215ENST00000641371 PTCD1O75127 700 aaKnown RBP12.05□□□□□ -0.48
PHGDH-215ENST00000641371 ANXA1P04083 346 aa12.05□□□□□ -0.48
PHGDH-215ENST00000641371 AIMP1Q12904 312 aaKnown RBP12.05□□□□□ -0.48
PHGDH-215ENST00000641371 C8orf34Q49A92 452 aa12.05□□□□□ -0.48
PHGDH-215ENST00000641371 HSP90AB3PQ58FF7 597 aa12.05□□□□□ -0.48
PHGDH-215ENST00000641371 NPM2Q86SE8 214 aaKnown RBP12.05□□□□□ -0.48
PHGDH-215ENST00000641371 ERC1Q8IUD2 1116 aa12.05□□□□□ -0.48
PHGDH-215ENST00000641371 LNPKQ9C0E8 428 aa12.05□□□□□ -0.48
PHGDH-215ENST00000641371 THSD7AQ9UPZ6 1657 aa12.05□□□□□ -0.48
PHGDH-215ENST00000641371 NUP188Q5SRE5 1749 aa12.05□□□□□ -0.48
PHGDH-215ENST00000641371 NEURL1BA8MQ27 555 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms