RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 TWISTNBQ3B726 338 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-225ENST00000640900 TTC5Q8N0Z6 440 aa11.79□□□□□ -0.52
SCARB2-225ENST00000640900 PROM2Q8N271 834 aa11.79□□□□□ -0.52
SCARB2-225ENST00000640900 RREB1Q92766 1687 aa11.78□□□□□ -0.52
SCARB2-225ENST00000640900 LAMB4A4D0S4 1761 aa11.78□□□□□ -0.52
SCARB2-225ENST00000640900 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
SCARB2-225ENST00000640900 LRP10Q7Z4F1 713 aa11.78□□□□□ -0.52
SCARB2-225ENST00000640900 TEX13AQ9BXU3 409 aaPredicted RBP11.78□□□□□ -0.52
SCARB2-225ENST00000640900 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.52
SCARB2-225ENST00000640900 PTCD1O75127 700 aaKnown RBP11.77□□□□□ -0.53
SCARB2-225ENST00000640900 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
SCARB2-225ENST00000640900 RARSP54136 660 aaKnown RBP11.77□□□□□ -0.53
SCARB2-225ENST00000640900 ITPK1Q13572 414 aa11.77□□□□□ -0.53
SCARB2-225ENST00000640900 PDIA6Q15084 440 aa11.77□□□□□ -0.53
SCARB2-225ENST00000640900 ALDH1L2Q3SY69 923 aa11.77□□□□□ -0.53
SCARB2-225ENST00000640900 CCDC125Q86Z20 511 aa11.77□□□□□ -0.53
SCARB2-225ENST00000640900 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
SCARB2-225ENST00000640900 ERBB4Q15303 1308 aa11.77□□□□□ -0.53
SCARB2-225ENST00000640900 RNF123Q5XPI4 1314 aa11.77□□□□□ -0.53
SCARB2-225ENST00000640900 CACNA1FO60840 1977 aa11.76□□□□□ -0.53
SCARB2-225ENST00000640900 SLC27A3Q5K4L6 730 aa11.76□□□□□ -0.53
SCARB2-225ENST00000640900 DNAJC10Q8IXB1 793 aa11.76□□□□□ -0.53
SCARB2-225ENST00000640900 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
SCARB2-225ENST00000640900 TAF1LQ8IZX4 1826 aa11.76□□□□□ -0.53
SCARB2-225ENST00000640900 ELL2O00472 640 aaPredicted RBP11.75□□□□□ -0.53
SCARB2-225ENST00000640900 RC3H1Q5TC82 1133 aaKnown RBP11.75□□□□□ -0.53
SCARB2-225ENST00000640900 SSH1Q8WYL5 1049 aa11.75□□□□□ -0.53
SCARB2-225ENST00000640900 CAMKK2Q96RR4 588 aa11.75□□□□□ -0.53
SCARB2-225ENST00000640900 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
SCARB2-225ENST00000640900 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
SCARB2-225ENST00000640900 MYH14Q7Z406 1995 aaKnown RBP11.75□□□□□ -0.53
SCARB2-225ENST00000640900 NBPF26B4DH59 902 aa11.74□□□□□ -0.53
SCARB2-225ENST00000640900 APBA3O96018 575 aa11.74□□□□□ -0.53
SCARB2-225ENST00000640900 NBPF14Q5TI25 921 aa11.74□□□□□ -0.53
SCARB2-225ENST00000640900 CCDC30Q5VVM6 783 aa11.74□□□□□ -0.53
SCARB2-225ENST00000640900 NBPF10Q6P3W6 841 aaKnown RBP11.74□□□□□ -0.53
SCARB2-225ENST00000640900 INTS5Q6P9B9 1019 aaKnown RBP11.74□□□□□ -0.53
SCARB2-225ENST00000640900 ILDR2Q71H61 639 aa11.74□□□□□ -0.53
SCARB2-225ENST00000640900 MRPL50Q8N5N7 158 aaKnown RBP11.74□□□□□ -0.53
SCARB2-225ENST00000640900 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
SCARB2-225ENST00000640900 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
SCARB2-225ENST00000640900 STARD3NLO95772 234 aa11.73□□□□□ -0.53
SCARB2-225ENST00000640900 ATP6V1AP38606 617 aa11.73□□□□□ -0.53
SCARB2-225ENST00000640900 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
SCARB2-225ENST00000640900 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
SCARB2-225ENST00000640900 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
SCARB2-225ENST00000640900 CNTNAP4Q9C0A0 1308 aa11.73□□□□□ -0.53
SCARB2-225ENST00000640900 DDX21Q9NR30 783 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCARB2-225ENST00000640900 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
SCARB2-225ENST00000640900 UPF1Q92900 1129 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCARB2-225ENST00000640900 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-225ENST00000640900 CCNL1Q9UK58 526 aaPredicted RBP11.72□□□□□ -0.53
SCARB2-225ENST00000640900 BCAR3O75815 825 aa11.71□□□□□ -0.53
SCARB2-225ENST00000640900 A1BGP04217 495 aa11.71□□□□□ -0.53
SCARB2-225ENST00000640900 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.53
SCARB2-225ENST00000640900 CRKLP46109 303 aaKnown RBP11.71□□□□□ -0.53
SCARB2-225ENST00000640900 EIF5P55010 431 aaKnown RBP11.71□□□□□ -0.53
SCARB2-225ENST00000640900 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.53
SCARB2-225ENST00000640900 C4BP0C0L5 1744 aa11.71□□□□□ -0.54
SCARB2-225ENST00000640900 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-225ENST00000640900 EIF2S2P20042 333 aaKnown RBP11.7□□□□□ -0.54
SCARB2-225ENST00000640900 IL6STP40189 918 aaPredicted RBP11.7□□□□□ -0.54
SCARB2-225ENST00000640900 KCNQ4P56696 695 aa11.7□□□□□ -0.54
SCARB2-225ENST00000640900 ARHGAP45Q92619 1136 aa11.7□□□□□ -0.54
SCARB2-225ENST00000640900 CCDC87Q9NVE4 849 aa11.7□□□□□ -0.54
SCARB2-225ENST00000640900 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
SCARB2-225ENST00000640900 BAG6P46379 1132 aa11.69□□□□□ -0.54
SCARB2-225ENST00000640900 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
SCARB2-225ENST00000640900 G2E3Q7L622 706 aa11.69□□□□□ -0.54
SCARB2-225ENST00000640900 AKT1S1Q96B36 256 aa11.69□□□□□ -0.54
SCARB2-225ENST00000640900 SMC4Q9NTJ3 1288 aa11.69□□□□□ -0.54
SCARB2-225ENST00000640900 ZBTB1Q9Y2K1 713 aa11.69□□□□□ -0.54
SCARB2-225ENST00000640900 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
SCARB2-225ENST00000640900 PTPRCP08575 1304 aa11.68□□□□□ -0.54
SCARB2-225ENST00000640900 RGL2O15211 777 aa11.68□□□□□ -0.54
SCARB2-225ENST00000640900 RPS6KA4O75676 772 aa11.68□□□□□ -0.54
SCARB2-225ENST00000640900 EZH2Q15910 746 aaKnown RBP11.68□□□□□ -0.54
SCARB2-225ENST00000640900 DEFB132Q7Z7B7 95 aa11.68□□□□□ -0.54
SCARB2-225ENST00000640900 AMIGO3Q86WK7 504 aa11.68□□□□□ -0.54
SCARB2-225ENST00000640900 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
SCARB2-225ENST00000640900 STK31Q9BXU1 1019 aa11.68□□□□□ -0.54
SCARB2-225ENST00000640900 NUP188Q5SRE5 1749 aa11.68□□□□□ -0.54
SCARB2-225ENST00000640900 UBR3Q6ZT12 1888 aa11.68□□□□□ -0.54
SCARB2-225ENST00000640900 KIF16BQ96L93 1317 aa11.67□□□□□ -0.54
SCARB2-225ENST00000640900 TCERG1O14776 1098 aaKnown RBP11.67□□□□□ -0.54
SCARB2-225ENST00000640900 ANXA1P04083 346 aa11.67□□□□□ -0.54
SCARB2-225ENST00000640900 FLIIQ13045 1269 aa11.67□□□□□ -0.54
SCARB2-225ENST00000640900 BCL2L13Q9BXK5 485 aa11.67□□□□□ -0.54
SCARB2-225ENST00000640900 PHAXQ9H814 394 aaKnown RBP11.67□□□□□ -0.54
SCARB2-225ENST00000640900 SF3B2Q13435 895 aaKnown RBP11.66□□□□□ -0.54
SCARB2-225ENST00000640900 ZNF827Q17R98 1081 aa11.66□□□□□ -0.54
SCARB2-225ENST00000640900 NOB1Q9ULX3 412 aaKnown RBP11.66□□□□□ -0.54
SCARB2-225ENST00000640900 QSER1Q2KHR3 1735 aa11.66□□□□□ -0.54
SCARB2-225ENST00000640900 ADCY9O60503 1353 aa11.66□□□□□ -0.54
SCARB2-225ENST00000640900 TRIM27P14373 513 aa11.65□□□□□ -0.54
SCARB2-225ENST00000640900 PIP4K2AP48426 406 aaPredicted RBP11.65□□□□□ -0.54
SCARB2-225ENST00000640900 RRP1P56182 461 aaKnown RBP11.65□□□□□ -0.54
SCARB2-225ENST00000640900 ATF7IPQ6VMQ6 1270 aa11.65□□□□□ -0.54
SCARB2-225ENST00000640900 COPS6Q7L5N1 327 aa11.65□□□□□ -0.54
SCARB2-225ENST00000640900 XAGE3Q8WTP9 111 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms