RNA–Protein interactions for RNA: ENST00000640360.1

SLC35A3-220, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 4,437 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-220ENST00000640360 HOXC9P31274 260 aa12.8□□□□□ -0.36
SLC35A3-220ENST00000640360 DNTTIP2Q5QJE6 756 aaKnown RBP12.8□□□□□ -0.36
SLC35A3-220ENST00000640360 RAB11FIP4Q86YS3 637 aa12.8□□□□□ -0.36
SLC35A3-220ENST00000640360 ANP32BQ92688 251 aaKnown RBP12.8□□□□□ -0.36
SLC35A3-220ENST00000640360 NAP1L2Q9ULW6 460 aaPredicted RBP12.8□□□□□ -0.36
SLC35A3-220ENST00000640360 HMMRO75330 724 aa12.8□□□□□ -0.36
SLC35A3-220ENST00000640360 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
SLC35A3-220ENST00000640360 AK2P54819 239 aa12.8□□□□□ -0.36
SLC35A3-220ENST00000640360 PREX1Q8TCU6 1659 aa12.79□□□□□ -0.36
SLC35A3-220ENST00000640360 KCNJ4P48050 445 aa12.79□□□□□ -0.36
SLC35A3-220ENST00000640360 PIK3R4Q99570 1358 aa12.79□□□□□ -0.36
SLC35A3-220ENST00000640360 DLC1Q96QB1 1528 aa12.79□□□□□ -0.36
SLC35A3-220ENST00000640360 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
SLC35A3-220ENST00000640360 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
SLC35A3-220ENST00000640360 CLTCQ00610 1675 aaKnown RBP12.79□□□□□ -0.36
SLC35A3-220ENST00000640360 SRCIN1Q9C0H9 1055 aa12.79□□□□□ -0.36
SLC35A3-220ENST00000640360 DNM1Q05193 864 aaKnown RBP12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 RHPN1Q8TCX5 695 aa12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 CRB1P82279 1406 aa12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 A0A0G2JLW4 131 aa12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 SEC62Q99442 399 aaKnown RBP12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 C9orf78Q9NZ63 289 aaPredicted RBP12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 CFAP74Q9C0B2 1584 aa12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 ZFYVE9O95405 1425 aa12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 CYP2E1P05181 493 aaPredicted RBP12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 CHST3Q7LGC8 479 aa12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 CKAP2LQ8IYA6 745 aa12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
SLC35A3-220ENST00000640360 CCDC30Q5VVM6 783 aa12.77□□□□□ -0.36
SLC35A3-220ENST00000640360 JAKMIP1Q96N16 626 aaKnown RBP12.77□□□□□ -0.36
SLC35A3-220ENST00000640360 MAP3K2Q9Y2U5 619 aa12.77□□□□□ -0.36
SLC35A3-220ENST00000640360 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
SLC35A3-220ENST00000640360 ATP8B2P98198 1209 aa12.77□□□□□ -0.37
SLC35A3-220ENST00000640360 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
SLC35A3-220ENST00000640360 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
SLC35A3-220ENST00000640360 IGSF3O75054 1194 aa12.77□□□□□ -0.37
SLC35A3-220ENST00000640360 HSP90AB3PQ58FF7 597 aa12.77□□□□□ -0.37
SLC35A3-220ENST00000640360 STK11IPQ8N1F8 1099 aa12.77□□□□□ -0.37
SLC35A3-220ENST00000640360 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
SLC35A3-220ENST00000640360 PTPRUQ92729 1446 aa12.77□□□□□ -0.37
SLC35A3-220ENST00000640360 NUCB2P80303 420 aa12.76□□□□□ -0.37
SLC35A3-220ENST00000640360 PSME1Q06323 249 aa12.76□□□□□ -0.37
SLC35A3-220ENST00000640360 TEFQ10587 303 aa12.76□□□□□ -0.37
SLC35A3-220ENST00000640360 RUFY3Q7L099 469 aa12.76□□□□□ -0.37
SLC35A3-220ENST00000640360 BTBD11A6QL63 1104 aa12.76□□□□□ -0.37
SLC35A3-220ENST00000640360 SNX14Q9Y5W7 946 aa12.76□□□□□ -0.37
SLC35A3-220ENST00000640360 ATP7BP35670 1465 aa12.76□□□□□ -0.37
SLC35A3-220ENST00000640360 AACSQ86V21 672 aa12.76□□□□□ -0.37
SLC35A3-220ENST00000640360 CCT4P50991 539 aaKnown RBP12.75□□□□□ -0.37
SLC35A3-220ENST00000640360 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
SLC35A3-220ENST00000640360 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
SLC35A3-220ENST00000640360 AP5Z1O43299 807 aa12.74□□□□□ -0.37
SLC35A3-220ENST00000640360 SYT1P21579 422 aa12.74□□□□□ -0.37
SLC35A3-220ENST00000640360 SKOR2Q2VWA4 1001 aaPredicted RBP12.74□□□□□ -0.37
SLC35A3-220ENST00000640360 SYTL4Q96C24 671 aaPredicted RBP12.74□□□□□ -0.37
SLC35A3-220ENST00000640360 GUCY1B3Q02153 619 aa12.74□□□□□ -0.37
SLC35A3-220ENST00000640360 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
SLC35A3-220ENST00000640360 ZMYND15Q9H091 742 aa12.74□□□□□ -0.37
SLC35A3-220ENST00000640360 EID1Q9Y6B2 187 aa12.74□□□□□ -0.37
SLC35A3-220ENST00000640360 PTPRCP08575 1304 aa12.73□□□□□ -0.37
SLC35A3-220ENST00000640360 EPHA10Q5JZY3 1008 aa12.73□□□□□ -0.37
SLC35A3-220ENST00000640360 USP6P35125 1406 aa12.73□□□□□ -0.37
SLC35A3-220ENST00000640360 KIF20BQ96Q89 1820 aa12.73□□□□□ -0.37
SLC35A3-220ENST00000640360 CHMP4BQ9H444 224 aaKnown RBP12.73□□□□□ -0.37
SLC35A3-220ENST00000640360 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
SLC35A3-220ENST00000640360 TNRQ92752 1358 aa12.73□□□□□ -0.37
SLC35A3-220ENST00000640360 PTPN21Q16825 1174 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 DIAPH3Q9NSV4 1193 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 A0A0G2JS52 829 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 BRD1O95696 1058 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 GJB2P29033 226 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 ZNF589Q86UQ0 364 aaPredicted RBP12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 EAF2Q96CJ1 260 aaPredicted RBP12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 TMEM2Q9UHN6 1383 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 ARHGAP31Q2M1Z3 1444 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 PEAK1Q9H792 1746 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 RGPD8O14715 1765 aaPredicted RBP12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
SLC35A3-220ENST00000640360 UQCRHLA0A096LP55 91 aa12.71□□□□□ -0.37
SLC35A3-220ENST00000640360 UQCRHP07919 91 aa12.71□□□□□ -0.37
SLC35A3-220ENST00000640360 GNAI3P08754 354 aa12.71□□□□□ -0.37
SLC35A3-220ENST00000640360 BICC1Q9H694 974 aaKnown RBP12.71□□□□□ -0.37
SLC35A3-220ENST00000640360 USP32Q8NFA0 1604 aa12.71□□□□□ -0.37
SLC35A3-220ENST00000640360 RICTORQ6R327 1708 aa12.71□□□□□ -0.37
SLC35A3-220ENST00000640360 A0A0D9SFI3 127 aa12.71□□□□□ -0.37
SLC35A3-220ENST00000640360 JAK2O60674 1132 aa12.71□□□□□ -0.37
SLC35A3-220ENST00000640360 USP16Q9Y5T5 823 aa12.71□□□□□ -0.37
SLC35A3-220ENST00000640360 EP400Q96L91 3159 aa12.71□□□□□ -0.38
SLC35A3-220ENST00000640360 ME3Q16798 604 aa12.71□□□□□ -0.38
SLC35A3-220ENST00000640360 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.38
SLC35A3-220ENST00000640360 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.38
SLC35A3-220ENST00000640360 SUCLG2Q96I99 432 aa12.71□□□□□ -0.38
SLC35A3-220ENST00000640360 SALL3Q9BXA9 1300 aa12.7□□□□□ -0.38
SLC35A3-220ENST00000640360 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
SLC35A3-220ENST00000640360 UBE2Q2Q8WVN8 375 aa12.7□□□□□ -0.38
SLC35A3-220ENST00000640360 IBTKQ9P2D0 1353 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms