RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 KDM5BQ9UGL1 1544 aa9.44□□□□□ -0.9
ATM-229ENST00000639953 ASXL2Q76L83 1435 aa9.43□□□□□ -0.9
ATM-229ENST00000639953 MYCP01106 439 aaPredicted RBP9.43□□□□□ -0.9
ATM-229ENST00000639953 CELA2BP08218 269 aaPredicted RBP9.43□□□□□ -0.9
ATM-229ENST00000639953 EIF4G2P78344 907 aaKnown RBP eCLIP9.43□□□□□ -0.9
ATM-229ENST00000639953 RASSF7Q02833 373 aa9.43□□□□□ -0.9
ATM-229ENST00000639953 TAS1R3Q7RTX0 852 aa9.43□□□□□ -0.9
ATM-229ENST00000639953 HRH3Q9Y5N1 445 aa9.43□□□□□ -0.9
ATM-229ENST00000639953 DIP2BQ9P265 1576 aa9.42□□□□□ -0.9
ATM-229ENST00000639953 WASLO00401 505 aaPredicted RBP9.42□□□□□ -0.9
ATM-229ENST00000639953 GMCL1Q96IK5 515 aa9.42□□□□□ -0.9
ATM-229ENST00000639953 ABCC10Q5T3U5 1492 aa9.41□□□□□ -0.9
ATM-229ENST00000639953 CLIP1P30622 1438 aa9.41□□□□□ -0.9
ATM-229ENST00000639953 H7C1W4 665 aa9.41□□□□□ -0.9
ATM-229ENST00000639953 ABL2P42684 1182 aa9.41□□□□□ -0.9
ATM-229ENST00000639953 FAM69CQ0P6D2 419 aa9.41□□□□□ -0.9
ATM-229ENST00000639953 TRIM26Q12899 539 aaPredicted RBP9.41□□□□□ -0.9
ATM-229ENST00000639953 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
ATM-229ENST00000639953 TMEM151AQ8N4L1 468 aa9.41□□□□□ -0.9
ATM-229ENST00000639953 PRM3Q9NNZ6 103 aa9.41□□□□□ -0.9
ATM-229ENST00000639953 ATP10BO94823 1461 aa9.4□□□□□ -0.9
ATM-229ENST00000639953 NUP153P49790 1475 aaKnown RBP9.4□□□□□ -0.9
ATM-229ENST00000639953 TSPOAP1O95153 1857 aa9.4□□□□□ -0.9
ATM-229ENST00000639953 CEP162Q5TB80 1403 aa9.4□□□□□ -0.9
ATM-229ENST00000639953 GDF11O95390 407 aa9.4□□□□□ -0.9
ATM-229ENST00000639953 F11P03951 625 aa9.4□□□□□ -0.9
ATM-229ENST00000639953 THBS1P07996 1170 aa9.4□□□□□ -0.9
ATM-229ENST00000639953 MARSP56192 900 aaKnown RBP9.4□□□□□ -0.9
ATM-229ENST00000639953 SLFNL1Q499Z3 407 aa9.4□□□□□ -0.9
ATM-229ENST00000639953 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
ATM-229ENST00000639953 ZSCAN10Q96SZ4 725 aaPredicted RBP9.4□□□□□ -0.9
ATM-229ENST00000639953 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
ATM-229ENST00000639953 LRRIQ1Q96JM4 1722 aa9.39□□□□□ -0.91
ATM-229ENST00000639953 IRS1P35568 1242 aa9.39□□□□□ -0.91
ATM-229ENST00000639953 USP4Q13107 963 aa9.39□□□□□ -0.91
ATM-229ENST00000639953 RNF135Q8IUD6 432 aa9.39□□□□□ -0.91
ATM-229ENST00000639953 FHDC1Q9C0D6 1143 aaPredicted RBP9.39□□□□□ -0.91
ATM-229ENST00000639953 NUCKS1Q9H1E3 243 aaKnown RBP9.39□□□□□ -0.91
ATM-229ENST00000639953 GPAMQ9HCL2 828 aa9.39□□□□□ -0.91
ATM-229ENST00000639953 DOLKQ9UPQ8 538 aa9.39□□□□□ -0.91
ATM-229ENST00000639953 CDK13Q14004 1512 aaKnown RBP9.38□□□□□ -0.91
ATM-229ENST00000639953 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
ATM-229ENST00000639953 ETNK1Q9HBU6 452 aa9.38□□□□□ -0.91
ATM-229ENST00000639953 FMN1Q68DA7 1419 aa9.38□□□□□ -0.91
ATM-229ENST00000639953 PCF11O94913 1555 aaKnown RBP9.37□□□□□ -0.91
ATM-229ENST00000639953 EPRSP07814 1512 aaKnown RBP9.37□□□□□ -0.91
ATM-229ENST00000639953 WDR7Q9Y4E6 1490 aa9.37□□□□□ -0.91
ATM-229ENST00000639953 C4orf17Q53FE4 359 aa9.37□□□□□ -0.91
ATM-229ENST00000639953 TMEM214Q6NUQ4 689 aaKnown RBP9.37□□□□□ -0.91
ATM-229ENST00000639953 CHIC2Q9UKJ5 165 aa9.37□□□□□ -0.91
ATM-229ENST00000639953 HECW1Q76N89 1606 aa9.36□□□□□ -0.91
ATM-229ENST00000639953 MAP3K10Q02779 954 aa9.36□□□□□ -0.91
ATM-229ENST00000639953 ACDQ96AP0 544 aa9.36□□□□□ -0.91
ATM-229ENST00000639953 TRERF1Q96PN7 1200 aa9.36□□□□□ -0.91
ATM-229ENST00000639953 PPRC1Q5VV67 1664 aaKnown RBP9.36□□□□□ -0.91
ATM-229ENST00000639953 CNTNAP5Q8WYK1 1306 aa9.34□□□□□ -0.91
ATM-229ENST00000639953 GLI2P10070 1586 aa9.34□□□□□ -0.91
ATM-229ENST00000639953 MX2P20592 715 aa9.34□□□□□ -0.91
ATM-229ENST00000639953 ESCO1Q5FWF5 840 aa9.34□□□□□ -0.91
ATM-229ENST00000639953 RUBCNLQ9H714 662 aa9.34□□□□□ -0.91
ATM-229ENST00000639953 MAP3K4Q9Y6R4 1608 aa9.34□□□□□ -0.91
ATM-229ENST00000639953 RNF225M0QZC1 329 aaPredicted RBP9.33□□□□□ -0.92
ATM-229ENST00000639953 SEMA3FQ13275 785 aa9.33□□□□□ -0.92
ATM-229ENST00000639953 GNASQ5JWF2 1037 aa9.33□□□□□ -0.92
ATM-229ENST00000639953 CASKIN1Q8WXD9 1431 aa9.32□□□□□ -0.92
ATM-229ENST00000639953 BCRP11274 1271 aa9.32□□□□□ -0.92
ATM-229ENST00000639953 MSX1P28360 303 aa9.32□□□□□ -0.92
ATM-229ENST00000639953 UBAP2LQ14157 1087 aaKnown RBP9.32□□□□□ -0.92
ATM-229ENST00000639953 MCM6Q14566 821 aa9.32□□□□□ -0.92
ATM-229ENST00000639953 WASHC4Q2M389 1173 aa9.32□□□□□ -0.92
ATM-229ENST00000639953 SCARF2Q96GP6 870 aaPredicted RBP9.32□□□□□ -0.92
ATM-229ENST00000639953 A0A1B0GTH6 734 aa9.31□□□□□ -0.92
ATM-229ENST00000639953 PIK3CDO00329 1044 aa9.31□□□□□ -0.92
ATM-229ENST00000639953 GTF2E1P29083 439 aaPredicted RBP9.31□□□□□ -0.92
ATM-229ENST00000639953 SCNN1DP51172 638 aa9.31□□□□□ -0.92
ATM-229ENST00000639953 TLR1Q15399 786 aa9.31□□□□□ -0.92
ATM-229ENST00000639953 PLPP7Q8NBV4 271 aa9.31□□□□□ -0.92
ATM-229ENST00000639953 ENAMQ9NRM1 1142 aa9.31□□□□□ -0.92
ATM-229ENST00000639953 CFAP43Q8NDM7 1665 aa9.31□□□□□ -0.92
ATM-229ENST00000639953 FYCO1Q9BQS8 1478 aa9.3□□□□□ -0.92
ATM-229ENST00000639953 PLEKHD1A6NEE1 506 aa9.3□□□□□ -0.92
ATM-229ENST00000639953 INHAP05111 366 aa9.3□□□□□ -0.92
ATM-229ENST00000639953 NEDD1Q8NHV4 660 aa9.3□□□□□ -0.92
ATM-229ENST00000639953 RHBDD1Q8TEB9 315 aa9.3□□□□□ -0.92
ATM-229ENST00000639953 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
ATM-229ENST00000639953 CFHR5Q9BXR6 569 aa9.3□□□□□ -0.92
ATM-229ENST00000639953 COG6Q9Y2V7 657 aa9.3□□□□□ -0.92
ATM-229ENST00000639953 GDF10P55107 478 aa9.29□□□□□ -0.92
ATM-229ENST00000639953 MAP7D1Q3KQU3 841 aa9.29□□□□□ -0.92
ATM-229ENST00000639953 SERTAD1Q9UHV2 236 aa9.29□□□□□ -0.92
ATM-229ENST00000639953 ABCA9Q8IUA7 1624 aa9.29□□□□□ -0.92
ATM-229ENST00000639953 MAGI3Q5TCQ9 1506 aa9.29□□□□□ -0.92
ATM-229ENST00000639953 CD109Q6YHK3 1445 aa9.29□□□□□ -0.92
ATM-229ENST00000639953 TTC37Q6PGP7 1564 aa9.29□□□□□ -0.92
ATM-229ENST00000639953 KIF14Q15058 1648 aa9.28□□□□□ -0.92
ATM-229ENST00000639953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.28□□□□□ -0.92
ATM-229ENST00000639953 C1orf229Q6ZS94 237 aaPredicted RBP9.28□□□□□ -0.92
ATM-229ENST00000639953 KLRG1Q96E93 195 aa9.28□□□□□ -0.92
ATM-229ENST00000639953 POM121Q96HA1 1249 aa9.28□□□□□ -0.92
ATM-229ENST00000639953 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms