RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 TNNQ9UQP3 1299 aa26.67■■□□□ 1.86
SCARB2-219ENST00000639738 ARHGAP45Q92619 1136 aa26.66■■□□□ 1.86
SCARB2-219ENST00000639738 CHMP4AQ9BY43 222 aa26.66■■□□□ 1.86
SCARB2-219ENST00000639738 CHPF2Q9P2E5 772 aa26.66■■□□□ 1.86
SCARB2-219ENST00000639738 KIF16BQ96L93 1317 aa26.66■■□□□ 1.86
SCARB2-219ENST00000639738 SF3B2Q13435 895 aaKnown RBP26.65■■□□□ 1.86
SCARB2-219ENST00000639738 LRP10Q7Z4F1 713 aa26.65■■□□□ 1.86
SCARB2-219ENST00000639738 RBM42Q9BTD8 480 aaKnown RBP26.65■■□□□ 1.86
SCARB2-219ENST00000639738 PROSER3Q2NL68 480 aa26.65■■□□□ 1.86
SCARB2-219ENST00000639738 DNAJC10Q8IXB1 793 aa26.65■■□□□ 1.86
SCARB2-219ENST00000639738 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.65■■□□□ 1.86
SCARB2-219ENST00000639738 FRAT1Q92837 279 aaPredicted RBP26.65■■□□□ 1.86
SCARB2-219ENST00000639738 STK31Q9BXU1 1019 aa26.64■■□□□ 1.85
SCARB2-219ENST00000639738 DBF4Q9UBU7 674 aaPredicted RBP26.64■■□□□ 1.85
SCARB2-219ENST00000639738 COL5A3P25940 1745 aaPredicted RBP26.63■■□□□ 1.85
SCARB2-219ENST00000639738 LOC102724428A0A0B4J2F2 783 aa26.63■■□□□ 1.85
SCARB2-219ENST00000639738 TRIM27P14373 513 aa26.63■■□□□ 1.85
SCARB2-219ENST00000639738 SIK1P57059 783 aa26.63■■□□□ 1.85
SCARB2-219ENST00000639738 IRX6P78412 446 aaPredicted RBP26.63■■□□□ 1.85
SCARB2-219ENST00000639738 ZKSCAN2Q63HK3 967 aa26.63■■□□□ 1.85
SCARB2-219ENST00000639738 DEFB132Q7Z7B7 95 aa26.63■■□□□ 1.85
SCARB2-219ENST00000639738 DDX21Q9NR30 783 aaKnown RBP eCLIP26.63■■□□□ 1.85
SCARB2-219ENST00000639738 TNS1Q9HBL0 1735 aaKnown RBP26.62■■□□□ 1.85
SCARB2-219ENST00000639738 RREB1Q92766 1687 aa26.62■■□□□ 1.85
SCARB2-219ENST00000639738 PDE3AQ14432 1141 aa26.62■■□□□ 1.85
SCARB2-219ENST00000639738 ATF7IPQ6VMQ6 1270 aa26.62■■□□□ 1.85
SCARB2-219ENST00000639738 TEX13AQ9BXU3 409 aaPredicted RBP26.62■■□□□ 1.85
SCARB2-219ENST00000639738 ERBB4Q15303 1308 aa26.61■■□□□ 1.85
SCARB2-219ENST00000639738 NBPF26B4DH59 902 aa26.61■■□□□ 1.85
SCARB2-219ENST00000639738 ANXA1P04083 346 aa26.61■■□□□ 1.85
SCARB2-219ENST00000639738 RLBP1P12271 317 aa26.61■■□□□ 1.85
SCARB2-219ENST00000639738 NBPF14Q5TI25 921 aa26.61■■□□□ 1.85
SCARB2-219ENST00000639738 NBPF10Q6P3W6 841 aaKnown RBP26.61■■□□□ 1.85
SCARB2-219ENST00000639738 NBPF15Q8N660 670 aa26.61■■□□□ 1.85
SCARB2-219ENST00000639738 PHAXQ9H814 394 aaKnown RBP26.61■■□□□ 1.85
SCARB2-219ENST00000639738 TRIM37O94972 964 aa26.6■■□□□ 1.85
SCARB2-219ENST00000639738 CYP19A1P11511 503 aaPredicted RBP26.6■■□□□ 1.85
SCARB2-219ENST00000639738 ITPK1Q13572 414 aa26.6■■□□□ 1.85
SCARB2-219ENST00000639738 IPO8O15397 1037 aaKnown RBP26.6■■□□□ 1.85
SCARB2-219ENST00000639738 PTPRCP08575 1304 aa26.59■■□□□ 1.85
SCARB2-219ENST00000639738 MYH14Q7Z406 1995 aaKnown RBP26.59■■□□□ 1.85
SCARB2-219ENST00000639738 A1BGP04217 495 aa26.59■■□□□ 1.85
SCARB2-219ENST00000639738 FLIIQ13045 1269 aa26.59■■□□□ 1.85
SCARB2-219ENST00000639738 TAF1LQ8IZX4 1826 aa26.58■■□□□ 1.85
SCARB2-219ENST00000639738 PANK1Q8TE04 598 aa26.57■■□□□ 1.84
SCARB2-219ENST00000639738 HYPKQ9NX55 129 aa26.57■■□□□ 1.84
SCARB2-219ENST00000639738 ATP6V1AP38606 617 aa26.56■■□□□ 1.84
SCARB2-219ENST00000639738 ABCC4O15439 1325 aa26.56■■□□□ 1.84
SCARB2-219ENST00000639738 PIP4K2AP48426 406 aaPredicted RBP26.55■■□□□ 1.84
SCARB2-219ENST00000639738 FKBP8Q14318 412 aa26.55■■□□□ 1.84
SCARB2-219ENST00000639738 STARD3NLO95772 234 aa26.55■■□□□ 1.84
SCARB2-219ENST00000639738 CANXP27824 592 aaKnown RBP26.55■■□□□ 1.84
SCARB2-219ENST00000639738 DZIP1LQ8IYY4 767 aaKnown RBP26.55■■□□□ 1.84
SCARB2-219ENST00000639738 API5Q9BZZ5 524 aaKnown RBP26.55■■□□□ 1.84
SCARB2-219ENST00000639738 BAG6P46379 1132 aa26.54■■□□□ 1.84
SCARB2-219ENST00000639738 CLUAP1Q96AJ1 413 aa26.54■■□□□ 1.84
SCARB2-219ENST00000639738 GTF3C3Q9Y5Q9 886 aa26.54■■□□□ 1.84
SCARB2-219ENST00000639738 N4BP2Q86UW6 1770 aaPredicted RBP26.53■■□□□ 1.84
SCARB2-219ENST00000639738 INTS5Q6P9B9 1019 aaKnown RBP26.53■■□□□ 1.84
SCARB2-219ENST00000639738 CRBNQ96SW2 442 aa26.53■■□□□ 1.84
SCARB2-219ENST00000639738 NEFLP07196 543 aa26.52■■□□□ 1.84
SCARB2-219ENST00000639738 MYL6BP14649 208 aa26.51■■□□□ 1.83
SCARB2-219ENST00000639738 KCNQ4P56696 695 aa26.51■■□□□ 1.83
SCARB2-219ENST00000639738 LINC00116Q8NCU8 138 aa26.51■■□□□ 1.83
SCARB2-219ENST00000639738 ADCY9O60503 1353 aa26.51■■□□□ 1.83
SCARB2-219ENST00000639738 MS4A1P11836 297 aa26.5■■□□□ 1.83
SCARB2-219ENST00000639738 EXOC6Q8TAG9 804 aa26.5■■□□□ 1.83
SCARB2-219ENST00000639738 FKBP5Q13451 457 aaPredicted RBP26.49■■□□□ 1.83
SCARB2-219ENST00000639738 PROM2Q8N271 834 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 TMEM57Q8N5G2 664 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 XAGE3Q8WTP9 111 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 LRRC4BQ9NT99 713 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 ZBTB1Q9Y2K1 713 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 RGPD3A6NKT7 1758 aaPredicted RBP26.49■■□□□ 1.83
SCARB2-219ENST00000639738 RGPD4Q7Z3J3 1758 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 F6X3S4 739 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 PLSCR1O15162 318 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 CRKLP46109 303 aaKnown RBP26.49■■□□□ 1.83
SCARB2-219ENST00000639738 COPS6Q7L5N1 327 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 COG6Q9Y2V7 657 aa26.49■■□□□ 1.83
SCARB2-219ENST00000639738 NUP188Q5SRE5 1749 aa26.48■■□□□ 1.83
SCARB2-219ENST00000639738 INTS3Q68E01 1043 aaKnown RBP26.48■■□□□ 1.83
SCARB2-219ENST00000639738 CCNL1Q9UK58 526 aaPredicted RBP26.48■■□□□ 1.83
SCARB2-219ENST00000639738 ERICH6BQ5W0A0 696 aa26.47■■□□□ 1.83
SCARB2-219ENST00000639738 CCDC87Q9NVE4 849 aa26.47■■□□□ 1.83
SCARB2-219ENST00000639738 PXDNLA1KZ92 1463 aa26.47■■□□□ 1.83
SCARB2-219ENST00000639738 MVPQ14764 893 aaKnown RBP26.46■■□□□ 1.83
SCARB2-219ENST00000639738 FTSJ3Q8IY81 847 aaKnown RBP26.46■■□□□ 1.83
SCARB2-219ENST00000639738 CNTNAP4Q9C0A0 1308 aa26.46■■□□□ 1.83
SCARB2-219ENST00000639738 ARFGEF2Q9Y6D5 1785 aa26.45■■□□□ 1.83
SCARB2-219ENST00000639738 PI4KAP2A4QPH2 592 aa26.45■■□□□ 1.83
SCARB2-219ENST00000639738 EIF5P55010 431 aaKnown RBP26.45■■□□□ 1.83
SCARB2-219ENST00000639738 KSR2Q6VAB6 950 aa26.45■■□□□ 1.83
SCARB2-219ENST00000639738 PI4KAP1Q8N8J0 262 aa26.45■■□□□ 1.83
SCARB2-219ENST00000639738 C4BP0C0L5 1744 aa26.45■■□□□ 1.82
SCARB2-219ENST00000639738 IL6STP40189 918 aaPredicted RBP26.44■■□□□ 1.82
SCARB2-219ENST00000639738 EN1Q05925 392 aaPredicted RBP26.44■■□□□ 1.82
SCARB2-219ENST00000639738 RC3H1Q5TC82 1133 aaKnown RBP26.44■■□□□ 1.82
SCARB2-219ENST00000639738 TTLL7Q6ZT98 887 aa26.44■■□□□ 1.82
SCARB2-219ENST00000639738 AIMP1Q12904 312 aaKnown RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms