RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 PNISRQ8TF01 805 aaKnown RBP23.59■■□□□ 1.37
SPIN3-220ENST00000639257 STARD3NLO95772 234 aa23.58■■□□□ 1.37
SPIN3-220ENST00000639257 CCDC146Q8IYE0 955 aa23.58■■□□□ 1.37
SPIN3-220ENST00000639257 THUMPD2Q9BTF0 503 aaKnown RBP23.58■■□□□ 1.37
SPIN3-220ENST00000639257 RFC4P35249 363 aa23.57■■□□□ 1.36
SPIN3-220ENST00000639257 EIF5P55010 431 aaKnown RBP23.57■■□□□ 1.36
SPIN3-220ENST00000639257 NLGN1Q8N2Q7 840 aa23.57■■□□□ 1.36
SPIN3-220ENST00000639257 COL15A1P39059 1388 aa23.56■■□□□ 1.36
SPIN3-220ENST00000639257 ANP32CO43423 234 aa23.56■■□□□ 1.36
SPIN3-220ENST00000639257 LMOD3Q0VAK6 560 aa23.56■■□□□ 1.36
SPIN3-220ENST00000639257 BABAM1Q9NWV8 329 aa23.56■■□□□ 1.36
SPIN3-220ENST00000639257 TRIM35Q9UPQ4 493 aa23.56■■□□□ 1.36
SPIN3-220ENST00000639257 SNRPA1P09661 255 aaKnown RBP23.55■■□□□ 1.36
SPIN3-220ENST00000639257 LAMB4A4D0S4 1761 aa23.55■■□□□ 1.36
SPIN3-220ENST00000639257 MIS18AQ9NYP9 233 aa23.54■■□□□ 1.36
SPIN3-220ENST00000639257 USP16Q9Y5T5 823 aa23.54■■□□□ 1.36
SPIN3-220ENST00000639257 PRAMEF22A3QJZ6 481 aa23.53■■□□□ 1.36
SPIN3-220ENST00000639257 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
SPIN3-220ENST00000639257 EIF4A1P60842 406 aaKnown RBP23.53■■□□□ 1.36
SPIN3-220ENST00000639257 SRP68Q9UHB9 627 aaKnown RBP23.53■■□□□ 1.36
SPIN3-220ENST00000639257 NARFQ9UHQ1 456 aa23.53■■□□□ 1.36
SPIN3-220ENST00000639257 CD2APQ9Y5K6 639 aa23.53■■□□□ 1.36
SPIN3-220ENST00000639257 KIF13BQ9NQT8 1826 aa23.53■■□□□ 1.36
SPIN3-220ENST00000639257 MMP10P09238 476 aa23.52■■□□□ 1.36
SPIN3-220ENST00000639257 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
SPIN3-220ENST00000639257 BCL2L12Q9HB09 334 aa23.51■■□□□ 1.35
SPIN3-220ENST00000639257 SCN7AQ01118 1682 aa23.51■■□□□ 1.35
SPIN3-220ENST00000639257 GIGYF1O75420 1035 aaPredicted RBP23.5■■□□□ 1.35
SPIN3-220ENST00000639257 A1BGP04217 495 aa23.5■■□□□ 1.35
SPIN3-220ENST00000639257 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
SPIN3-220ENST00000639257 FKBP8Q14318 412 aa23.5■■□□□ 1.35
SPIN3-220ENST00000639257 NLGN2Q8NFZ4 835 aa23.5■■□□□ 1.35
SPIN3-220ENST00000639257 C10orf71Q711Q0 1435 aa23.49■■□□□ 1.35
SPIN3-220ENST00000639257 KIAA1551Q9HCM1 1747 aa23.48■■□□□ 1.35
SPIN3-220ENST00000639257 TM4SF1P30408 202 aa23.48■■□□□ 1.35
SPIN3-220ENST00000639257 A0A087WZG4 1122 aa23.47■■□□□ 1.35
SPIN3-220ENST00000639257 CHL1O00533 1208 aa23.47■■□□□ 1.35
SPIN3-220ENST00000639257 APAF1O14727 1248 aa23.47■■□□□ 1.35
SPIN3-220ENST00000639257 USPL1Q5W0Q7 1092 aa23.47■■□□□ 1.35
SPIN3-220ENST00000639257 NRXN2Q9P2S2 1712 aa23.47■■□□□ 1.35
SPIN3-220ENST00000639257 NBPF26B4DH59 902 aa23.46■■□□□ 1.35
SPIN3-220ENST00000639257 ZPR1O75312 459 aa23.46■■□□□ 1.35
SPIN3-220ENST00000639257 DDR1Q08345 913 aa23.46■■□□□ 1.35
SPIN3-220ENST00000639257 NEUROD2Q15784 382 aa23.46■■□□□ 1.35
SPIN3-220ENST00000639257 NBPF10Q6P3W6 841 aaKnown RBP23.46■■□□□ 1.35
SPIN3-220ENST00000639257 BCORQ6W2J9 1755 aa23.46■■□□□ 1.35
SPIN3-220ENST00000639257 NBPF15Q8N660 670 aa23.46■■□□□ 1.35
SPIN3-220ENST00000639257 MRS2Q9HD23 443 aa23.46■■□□□ 1.35
SPIN3-220ENST00000639257 TSPYL4Q9UJ04 414 aa23.45■■□□□ 1.34
SPIN3-220ENST00000639257 NCBP3Q53F19 620 aaKnown RBP23.44■■□□□ 1.34
SPIN3-220ENST00000639257 POLRMTO00411 1230 aaKnown RBP23.43■■□□□ 1.34
SPIN3-220ENST00000639257 RGL2O15211 777 aa23.43■■□□□ 1.34
SPIN3-220ENST00000639257 CAMTA2O94983 1202 aa23.42■■□□□ 1.34
SPIN3-220ENST00000639257 ZNF853P0CG23 659 aa23.42■■□□□ 1.34
SPIN3-220ENST00000639257 NFIXQ14938 502 aa23.42■■□□□ 1.34
SPIN3-220ENST00000639257 KLHL34Q8N239 644 aa23.42■■□□□ 1.34
SPIN3-220ENST00000639257 UTRNP46939 3433 aa23.42■■□□□ 1.34
SPIN3-220ENST00000639257 CFAP44Q96MT7 982 aa23.41■■□□□ 1.34
SPIN3-220ENST00000639257 PARP3Q9Y6F1 533 aa23.41■■□□□ 1.34
SPIN3-220ENST00000639257 PXDNLA1KZ92 1463 aa23.41■■□□□ 1.34
SPIN3-220ENST00000639257 AFDNP55196 1824 aaKnown RBP23.4■■□□□ 1.34
SPIN3-220ENST00000639257 ERBB4Q15303 1308 aa23.4■■□□□ 1.34
SPIN3-220ENST00000639257 CCDC27Q2M243 656 aa23.4■■□□□ 1.34
SPIN3-220ENST00000639257 PIP4K2AP48426 406 aaPredicted RBP23.39■■□□□ 1.33
SPIN3-220ENST00000639257 TBC1D2BQ9UPU7 963 aa23.39■■□□□ 1.33
SPIN3-220ENST00000639257 TGFB2P61812 414 aa23.38■■□□□ 1.33
SPIN3-220ENST00000639257 LRP10Q7Z4F1 713 aa23.38■■□□□ 1.33
SPIN3-220ENST00000639257 GOLGB1Q14789 3259 aaKnown RBP23.38■■□□□ 1.33
SPIN3-220ENST00000639257 DCAF8L1A6NGE4 600 aa23.37■■□□□ 1.33
SPIN3-220ENST00000639257 DZIP3Q86Y13 1208 aaKnown RBP23.37■■□□□ 1.33
SPIN3-220ENST00000639257 BRCA1P38398 1863 aaKnown RBP23.36■■□□□ 1.33
SPIN3-220ENST00000639257 CLEC4GQ6UXB4 293 aa23.36■■□□□ 1.33
SPIN3-220ENST00000639257 IFT57Q9NWB7 429 aa23.36■■□□□ 1.33
SPIN3-220ENST00000639257 HOXB7P09629 217 aa23.35■■□□□ 1.33
SPIN3-220ENST00000639257 YBX3P16989 372 aaKnown RBP eCLIP23.35■■□□□ 1.33
SPIN3-220ENST00000639257 PDIA6Q15084 440 aa23.35■■□□□ 1.33
SPIN3-220ENST00000639257 TBC1D9BQ66K14 1250 aa23.35■■□□□ 1.33
SPIN3-220ENST00000639257 CALD1Q05682 793 aaKnown RBP23.34■■□□□ 1.33
SPIN3-220ENST00000639257 MBIPQ9NS73 344 aa23.34■■□□□ 1.33
SPIN3-220ENST00000639257 ZNF330Q9Y3S2 320 aaPredicted RBP23.34■■□□□ 1.33
SPIN3-220ENST00000639257 N4BP2Q86UW6 1770 aaPredicted RBP23.33■■□□□ 1.33
SPIN3-220ENST00000639257 CARMIL3Q8ND23 1372 aa23.32■■□□□ 1.32
SPIN3-220ENST00000639257 SERPINB2P05120 415 aa23.32■■□□□ 1.32
SPIN3-220ENST00000639257 KCNA3P22001 575 aa23.32■■□□□ 1.32
SPIN3-220ENST00000639257 GNAI1P63096 354 aa23.32■■□□□ 1.32
SPIN3-220ENST00000639257 KRT24Q2M2I5 525 aa23.32■■□□□ 1.32
SPIN3-220ENST00000639257 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
SPIN3-220ENST00000639257 WWC1Q8IX03 1113 aa23.32■■□□□ 1.32
SPIN3-220ENST00000639257 GPR162Q16538 588 aa23.31■■□□□ 1.32
SPIN3-220ENST00000639257 CHD4Q14839 1912 aa23.31■■□□□ 1.32
SPIN3-220ENST00000639257 ERVV-1B6SEH8 477 aa23.3■■□□□ 1.32
SPIN3-220ENST00000639257 DPEP1P16444 411 aa23.29■■□□□ 1.32
SPIN3-220ENST00000639257 LAS1LQ9Y4W2 734 aaKnown RBP23.29■■□□□ 1.32
SPIN3-220ENST00000639257 IL16Q14005 1332 aa23.29■■□□□ 1.32
SPIN3-220ENST00000639257 ANKRD31Q8N7Z5 1873 aa23.28■■□□□ 1.32
SPIN3-220ENST00000639257 ATP10DQ9P241 1426 aa23.28■■□□□ 1.32
SPIN3-220ENST00000639257 DLEC1Q9Y238 1755 aa23.28■■□□□ 1.32
SPIN3-220ENST00000639257 GRIN3BO60391 1043 aa23.28■■□□□ 1.32
SPIN3-220ENST00000639257 TTLL7Q6ZT98 887 aa23.28■■□□□ 1.32
SPIN3-220ENST00000639257 ZNF652Q9Y2D9 606 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms