RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 ANKRD31Q8N7Z5 1873 aa7.58□□□□□ -1.2
PDE4D-229ENST00000638939 GNPATO15228 680 aa7.58□□□□□ -1.2
PDE4D-229ENST00000638939 PPM1GO15355 546 aaPredicted RBP7.58□□□□□ -1.2
PDE4D-229ENST00000638939 PRR29P0C7W0 189 aa7.58□□□□□ -1.2
PDE4D-229ENST00000638939 EIF4A2Q14240 407 aaKnown RBP7.58□□□□□ -1.2
PDE4D-229ENST00000638939 GPBP1L1Q9HC44 474 aaPredicted RBP7.58□□□□□ -1.2
PDE4D-229ENST00000638939 ATG3Q9NT62 314 aa7.58□□□□□ -1.2
PDE4D-229ENST00000638939 WDR70Q9NW82 654 aa7.58□□□□□ -1.2
PDE4D-229ENST00000638939 ASAP1Q9ULH1 1129 aa7.58□□□□□ -1.2
PDE4D-229ENST00000638939 COL11A2P13942 1736 aaPredicted RBP7.58□□□□□ -1.2
PDE4D-229ENST00000638939 ERVV-2B6SEH9 535 aa7.57□□□□□ -1.2
PDE4D-229ENST00000638939 GTPBP6O43824 516 aaPredicted RBP7.57□□□□□ -1.2
PDE4D-229ENST00000638939 HSP90AB1P08238 724 aaKnown RBP7.57□□□□□ -1.2
PDE4D-229ENST00000638939 ATP6V1AP38606 617 aa7.57□□□□□ -1.2
PDE4D-229ENST00000638939 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
PDE4D-229ENST00000638939 RNF25Q96BH1 459 aaPredicted RBP7.57□□□□□ -1.2
PDE4D-229ENST00000638939 FER1L6Q2WGJ9 1857 aa7.57□□□□□ -1.2
PDE4D-229ENST00000638939 KCPQ6ZWJ8 1503 aa7.57□□□□□ -1.2
PDE4D-229ENST00000638939 MMP10P09238 476 aa7.56□□□□□ -1.2
PDE4D-229ENST00000638939 HSPA6P17066 643 aa7.56□□□□□ -1.2
PDE4D-229ENST00000638939 RC3H1Q5TC82 1133 aaKnown RBP7.56□□□□□ -1.2
PDE4D-229ENST00000638939 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
PDE4D-229ENST00000638939 RTCBQ9Y3I0 505 aaKnown RBP7.56□□□□□ -1.2
PDE4D-229ENST00000638939 TGFB2P61812 414 aa7.55□□□□□ -1.2
PDE4D-229ENST00000638939 AMOTQ4VCS5 1084 aa7.55□□□□□ -1.2
PDE4D-229ENST00000638939 SMIM5Q71RC9 77 aa7.55□□□□□ -1.2
PDE4D-229ENST00000638939 SLC4A9Q96Q91 983 aa7.55□□□□□ -1.2
PDE4D-229ENST00000638939 STK24Q9Y6E0 443 aa7.55□□□□□ -1.2
PDE4D-229ENST00000638939 LAMB4A4D0S4 1761 aa7.54□□□□□ -1.2
PDE4D-229ENST00000638939 KIF3CO14782 793 aa7.54□□□□□ -1.2
PDE4D-229ENST00000638939 GYS1P13807 737 aa7.54□□□□□ -1.2
PDE4D-229ENST00000638939 IFFO2Q5TF58 517 aa7.54□□□□□ -1.2
PDE4D-229ENST00000638939 NLGN1Q8N2Q7 840 aa7.54□□□□□ -1.2
PDE4D-229ENST00000638939 RPS6KA4O75676 772 aa7.53□□□□□ -1.2
PDE4D-229ENST00000638939 TMEM132AQ24JP5 1023 aa7.53□□□□□ -1.2
PDE4D-229ENST00000638939 PLEKHO1Q53GL0 409 aaPredicted RBP7.53□□□□□ -1.2
PDE4D-229ENST00000638939 TRAPPC3LQ5T215 181 aa7.53□□□□□ -1.2
PDE4D-229ENST00000638939 ZNF530Q6P9A1 599 aaPredicted RBP7.53□□□□□ -1.2
PDE4D-229ENST00000638939 ZNF526Q8TF50 670 aaPredicted RBP7.53□□□□□ -1.2
PDE4D-229ENST00000638939 CCDC87Q9NVE4 849 aa7.53□□□□□ -1.2
PDE4D-229ENST00000638939 USP42Q9H9J4 1324 aaKnown RBP7.52□□□□□ -1.2
PDE4D-229ENST00000638939 COL3A1P02461 1466 aaPredicted RBP7.52□□□□□ -1.21
PDE4D-229ENST00000638939 RFC4P35249 363 aa7.52□□□□□ -1.21
PDE4D-229ENST00000638939 TNNT2P45379 298 aaPredicted RBP7.52□□□□□ -1.21
PDE4D-229ENST00000638939 EIF4G2P78344 907 aaKnown RBP eCLIP7.52□□□□□ -1.21
PDE4D-229ENST00000638939 C1orf141Q5JVX7 400 aa7.52□□□□□ -1.21
PDE4D-229ENST00000638939 ARHGEF1Q92888 912 aaKnown RBP7.52□□□□□ -1.21
PDE4D-229ENST00000638939 GTF3C3Q9Y5Q9 886 aa7.52□□□□□ -1.21
PDE4D-229ENST00000638939 DLG5Q8TDM6 1919 aa7.52□□□□□ -1.21
PDE4D-229ENST00000638939 CRKLP46109 303 aaKnown RBP7.51□□□□□ -1.21
PDE4D-229ENST00000638939 MTHFSP49914 203 aa7.51□□□□□ -1.21
PDE4D-229ENST00000638939 CABP4P57796 275 aa7.51□□□□□ -1.21
PDE4D-229ENST00000638939 ZNF467Q7Z7K2 595 aaPredicted RBP7.51□□□□□ -1.21
PDE4D-229ENST00000638939 AEBP1Q8IUX7 1158 aa7.51□□□□□ -1.21
PDE4D-229ENST00000638939 PANK3Q9H999 370 aa7.51□□□□□ -1.21
PDE4D-229ENST00000638939 WWC3Q9ULE0 1092 aa7.51□□□□□ -1.21
PDE4D-229ENST00000638939 CLEC11AQ9Y240 323 aa7.51□□□□□ -1.21
PDE4D-229ENST00000638939 BCS1LQ9Y276 419 aa7.51□□□□□ -1.21
PDE4D-229ENST00000638939 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
PDE4D-229ENST00000638939 ZC3H4Q9UPT8 1303 aaKnown RBP7.51□□□□□ -1.21
PDE4D-229ENST00000638939 COL15A1P39059 1388 aa7.5□□□□□ -1.21
PDE4D-229ENST00000638939 A0A0G2JLW4 131 aa7.5□□□□□ -1.21
PDE4D-229ENST00000638939 TOMM70O94826 608 aa7.5□□□□□ -1.21
PDE4D-229ENST00000638939 HSPA5P11021 654 aaKnown RBP7.5□□□□□ -1.21
PDE4D-229ENST00000638939 DPEP1P16444 411 aa7.5□□□□□ -1.21
PDE4D-229ENST00000638939 KCNA3P22001 575 aa7.5□□□□□ -1.21
PDE4D-229ENST00000638939 APLP1P51693 650 aa7.5□□□□□ -1.21
PDE4D-229ENST00000638939 SCN4AP35499 1836 aa7.5□□□□□ -1.21
PDE4D-229ENST00000638939 SOS1Q07889 1333 aaPredicted RBP7.5□□□□□ -1.21
PDE4D-229ENST00000638939 KDM3BQ7LBC6 1761 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 PTCD1O75127 700 aaKnown RBP7.49□□□□□ -1.21
PDE4D-229ENST00000638939 FCHSD2O94868 740 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 IL13P35225 146 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 DDR1Q08345 913 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 AKAP4Q5JQC9 854 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 SULT6B1Q6IMI4 303 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 MORC1Q86VD1 984 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 POLR3GLQ9BT43 218 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 SLC52A2Q9HAB3 445 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 PIM2Q9P1W9 311 aa7.49□□□□□ -1.21
PDE4D-229ENST00000638939 SLX4Q8IY92 1834 aa7.48□□□□□ -1.21
PDE4D-229ENST00000638939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.48□□□□□ -1.21
PDE4D-229ENST00000638939 POLRMTO00411 1230 aaKnown RBP7.48□□□□□ -1.21
PDE4D-229ENST00000638939 DALRD3Q5D0E6 543 aaKnown RBP7.48□□□□□ -1.21
PDE4D-229ENST00000638939 INTS5Q6P9B9 1019 aaKnown RBP7.48□□□□□ -1.21
PDE4D-229ENST00000638939 NFATC2IPQ8NCF5 419 aa7.48□□□□□ -1.21
PDE4D-229ENST00000638939 RBM46Q8TBY0 533 aaKnown RBP7.48□□□□□ -1.21
PDE4D-229ENST00000638939 ZFP91Q96JP5 570 aaPredicted RBP7.48□□□□□ -1.21
PDE4D-229ENST00000638939 SRP68Q9UHB9 627 aaKnown RBP7.48□□□□□ -1.21
PDE4D-229ENST00000638939 KNSTRNQ9Y448 316 aa7.48□□□□□ -1.21
PDE4D-229ENST00000638939 KDM2BQ8NHM5 1336 aa7.48□□□□□ -1.21
PDE4D-229ENST00000638939 NUP98P52948 1817 aa7.48□□□□□ -1.21
PDE4D-229ENST00000638939 NPC1L1Q9UHC9 1359 aa7.47□□□□□ -1.21
PDE4D-229ENST00000638939 TM4SF1P30408 202 aa7.47□□□□□ -1.21
PDE4D-229ENST00000638939 FSTL1Q12841 308 aa7.47□□□□□ -1.21
PDE4D-229ENST00000638939 C9orf131Q5VYM1 1079 aa7.47□□□□□ -1.21
PDE4D-229ENST00000638939 ARHGAP27Q6ZUM4 889 aa7.47□□□□□ -1.21
PDE4D-229ENST00000638939 NMRK2Q9NPI5 230 aa7.47□□□□□ -1.21
PDE4D-229ENST00000638939 CREBZFQ9NS37 354 aa7.47□□□□□ -1.21
PDE4D-229ENST00000638939 ZPR1O75312 459 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms