RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
SCARB2-214ENST00000638843 TTC5Q8N0Z6 440 aa12.62□□□□□ -0.39
SCARB2-214ENST00000638843 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
SCARB2-214ENST00000638843 ADAMTS8Q9UP79 889 aa12.62□□□□□ -0.39
SCARB2-214ENST00000638843 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
SCARB2-214ENST00000638843 ADAMTS7Q9UKP4 1686 aa12.62□□□□□ -0.39
SCARB2-214ENST00000638843 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
SCARB2-214ENST00000638843 C5P01031 1676 aa12.61□□□□□ -0.39
SCARB2-214ENST00000638843 RPS6KA4O75676 772 aa12.61□□□□□ -0.39
SCARB2-214ENST00000638843 POLD1P28340 1107 aa12.61□□□□□ -0.39
SCARB2-214ENST00000638843 TRAPPC3LQ5T215 181 aa12.61□□□□□ -0.39
SCARB2-214ENST00000638843 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
SCARB2-214ENST00000638843 FHDC1Q9C0D6 1143 aaPredicted RBP12.61□□□□□ -0.39
SCARB2-214ENST00000638843 MAPK8IP3Q9UPT6 1336 aa12.61□□□□□ -0.39
SCARB2-214ENST00000638843 CYP19A1P11511 503 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-214ENST00000638843 CCDC146Q8IYE0 955 aa12.6□□□□□ -0.39
SCARB2-214ENST00000638843 ARHGEF1Q92888 912 aaKnown RBP12.6□□□□□ -0.39
SCARB2-214ENST00000638843 SYT17Q9BSW7 474 aa12.6□□□□□ -0.39
SCARB2-214ENST00000638843 THUMPD2Q9BTF0 503 aaKnown RBP12.6□□□□□ -0.39
SCARB2-214ENST00000638843 KCPQ6ZWJ8 1503 aa12.6□□□□□ -0.39
SCARB2-214ENST00000638843 SCN11AQ9UI33 1791 aa12.6□□□□□ -0.39
SCARB2-214ENST00000638843 WDR43Q15061 677 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCARB2-214ENST00000638843 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
SCARB2-214ENST00000638843 MIS18AQ9NYP9 233 aa12.6□□□□□ -0.39
SCARB2-214ENST00000638843 RIPK4P57078 832 aa12.59□□□□□ -0.39
SCARB2-214ENST00000638843 TAF7Q15545 349 aaPredicted RBP12.59□□□□□ -0.39
SCARB2-214ENST00000638843 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
SCARB2-214ENST00000638843 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
SCARB2-214ENST00000638843 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
SCARB2-214ENST00000638843 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
SCARB2-214ENST00000638843 RRP7AQ9Y3A4 280 aaKnown RBP12.58□□□□□ -0.4
SCARB2-214ENST00000638843 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
SCARB2-214ENST00000638843 RFC4P35249 363 aa12.57□□□□□ -0.4
SCARB2-214ENST00000638843 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
SCARB2-214ENST00000638843 RUNDC1Q96C34 613 aa12.57□□□□□ -0.4
SCARB2-214ENST00000638843 TAF1LQ8IZX4 1826 aa12.57□□□□□ -0.4
SCARB2-214ENST00000638843 TUBGCP6Q96RT7 1819 aa12.57□□□□□ -0.4
SCARB2-214ENST00000638843 PRAMEF22A3QJZ6 481 aa12.56□□□□□ -0.4
SCARB2-214ENST00000638843 ANP32CO43423 234 aa12.56□□□□□ -0.4
SCARB2-214ENST00000638843 STARD3NLO95772 234 aa12.56□□□□□ -0.4
SCARB2-214ENST00000638843 GYS1P13807 737 aa12.56□□□□□ -0.4
SCARB2-214ENST00000638843 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
SCARB2-214ENST00000638843 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
SCARB2-214ENST00000638843 SRP68Q9UHB9 627 aaKnown RBP12.56□□□□□ -0.4
SCARB2-214ENST00000638843 ZNF831Q5JPB2 1677 aa12.56□□□□□ -0.4
SCARB2-214ENST00000638843 SOS1Q07889 1333 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-214ENST00000638843 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
SCARB2-214ENST00000638843 TEX13AQ9BXU3 409 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-214ENST00000638843 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
SCARB2-214ENST00000638843 QSER1Q2KHR3 1735 aa12.55□□□□□ -0.4
SCARB2-214ENST00000638843 LHX8Q68G74 356 aa12.55□□□□□ -0.4
SCARB2-214ENST00000638843 NLGN1Q8N2Q7 840 aa12.55□□□□□ -0.4
SCARB2-214ENST00000638843 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
SCARB2-214ENST00000638843 A1BGP04217 495 aa12.54□□□□□ -0.4
SCARB2-214ENST00000638843 MMP10P09238 476 aa12.54□□□□□ -0.4
SCARB2-214ENST00000638843 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
SCARB2-214ENST00000638843 NLGN2Q8NFZ4 835 aa12.54□□□□□ -0.4
SCARB2-214ENST00000638843 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
SCARB2-214ENST00000638843 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
SCARB2-214ENST00000638843 EIF5P55010 431 aaKnown RBP12.53□□□□□ -0.4
SCARB2-214ENST00000638843 FKBP8Q14318 412 aa12.53□□□□□ -0.4
SCARB2-214ENST00000638843 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
SCARB2-214ENST00000638843 TJP1Q07157 1748 aa12.53□□□□□ -0.4
SCARB2-214ENST00000638843 PIP4K2AP48426 406 aaPredicted RBP12.52□□□□□ -0.4
SCARB2-214ENST00000638843 EIF4A1P60842 406 aaKnown RBP12.52□□□□□ -0.4
SCARB2-214ENST00000638843 USPL1Q5W0Q7 1092 aa12.52□□□□□ -0.4
SCARB2-214ENST00000638843 COL15A1P39059 1388 aa12.52□□□□□ -0.41
SCARB2-214ENST00000638843 COL5A3P25940 1745 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-214ENST00000638843 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.41
SCARB2-214ENST00000638843 APAF1O14727 1248 aa12.52□□□□□ -0.41
SCARB2-214ENST00000638843 ZPR1O75312 459 aa12.52□□□□□ -0.41
SCARB2-214ENST00000638843 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
SCARB2-214ENST00000638843 MRS2Q9HD23 443 aa12.52□□□□□ -0.41
SCARB2-214ENST00000638843 NARFQ9UHQ1 456 aa12.52□□□□□ -0.41
SCARB2-214ENST00000638843 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
SCARB2-214ENST00000638843 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-214ENST00000638843 GIGYF1O75420 1035 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-214ENST00000638843 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
SCARB2-214ENST00000638843 TSPYL4Q9UJ04 414 aa12.51□□□□□ -0.41
SCARB2-214ENST00000638843 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-214ENST00000638843 SIPA1L3O60292 1781 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-214ENST00000638843 NBPF26B4DH59 902 aa12.5□□□□□ -0.41
SCARB2-214ENST00000638843 IL6STP40189 918 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-214ENST00000638843 NBPF10Q6P3W6 841 aaKnown RBP12.5□□□□□ -0.41
SCARB2-214ENST00000638843 NBPF15Q8N660 670 aa12.5□□□□□ -0.41
SCARB2-214ENST00000638843 UBR2Q8IWV8 1755 aa12.5□□□□□ -0.41
SCARB2-214ENST00000638843 COL24A1Q17RW2 1714 aa12.49□□□□□ -0.41
SCARB2-214ENST00000638843 TM4SF1P30408 202 aa12.49□□□□□ -0.41
SCARB2-214ENST00000638843 DDR1Q08345 913 aa12.49□□□□□ -0.41
SCARB2-214ENST00000638843 TBC1D2BQ9UPU7 963 aa12.49□□□□□ -0.41
SCARB2-214ENST00000638843 A0A087WZG4 1122 aa12.48□□□□□ -0.41
SCARB2-214ENST00000638843 SENP3-EIF4A1A0A087X0R7 540 aa12.48□□□□□ -0.41
SCARB2-214ENST00000638843 CHL1O00533 1208 aa12.48□□□□□ -0.41
SCARB2-214ENST00000638843 BABAM1Q9NWV8 329 aa12.48□□□□□ -0.41
SCARB2-214ENST00000638843 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
SCARB2-214ENST00000638843 NFIXQ14938 502 aa12.47□□□□□ -0.41
SCARB2-214ENST00000638843 LAS1LQ9Y4W2 734 aaKnown RBP12.47□□□□□ -0.41
SCARB2-214ENST00000638843 POLRMTO00411 1230 aaKnown RBP12.47□□□□□ -0.41
SCARB2-214ENST00000638843 GPR162Q16538 588 aa12.47□□□□□ -0.41
SCARB2-214ENST00000638843 VIRMAQ69YN4 1812 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms