RNA–Protein interactions for RNA: ENST00000638304.1

GFAP-226, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,139 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-226ENST00000638304 TNNQ9UQP3 1299 aa17.53■□□□□ 0.4
GFAP-226ENST00000638304 HOXB7P09629 217 aa17.53■□□□□ 0.4
GFAP-226ENST00000638304 MYL6BP14649 208 aa17.53■□□□□ 0.4
GFAP-226ENST00000638304 ILDR2Q71H61 639 aa17.53■□□□□ 0.4
GFAP-226ENST00000638304 SMIM5Q71RC9 77 aa17.53■□□□□ 0.4
GFAP-226ENST00000638304 VSIG10Q8N0Z9 540 aa17.53■□□□□ 0.4
GFAP-226ENST00000638304 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
GFAP-226ENST00000638304 LINC00116Q8NCU8 138 aa17.53■□□□□ 0.4
GFAP-226ENST00000638304 NBPF26B4DH59 902 aa17.52■□□□□ 0.4
GFAP-226ENST00000638304 CYP19A1P11511 503 aaPredicted RBP17.52■□□□□ 0.4
GFAP-226ENST00000638304 NBPF14Q5TI25 921 aa17.52■□□□□ 0.4
GFAP-226ENST00000638304 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.4
GFAP-226ENST00000638304 NBPF15Q8N660 670 aa17.52■□□□□ 0.4
GFAP-226ENST00000638304 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
GFAP-226ENST00000638304 PHAXQ9H814 394 aaKnown RBP17.52■□□□□ 0.4
GFAP-226ENST00000638304 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
GFAP-226ENST00000638304 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
GFAP-226ENST00000638304 EN1Q05925 392 aaPredicted RBP17.5■□□□□ 0.39
GFAP-226ENST00000638304 NOB1Q9ULX3 412 aaKnown RBP17.5■□□□□ 0.39
GFAP-226ENST00000638304 ZBTB1Q9Y2K1 713 aa17.5■□□□□ 0.39
GFAP-226ENST00000638304 IRX6P78412 446 aaPredicted RBP17.5■□□□□ 0.39
GFAP-226ENST00000638304 ALDH1L2Q3SY69 923 aa17.5■□□□□ 0.39
GFAP-226ENST00000638304 TJP1Q07157 1748 aa17.5■□□□□ 0.39
GFAP-226ENST00000638304 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
GFAP-226ENST00000638304 CRKLP46109 303 aaKnown RBP17.49■□□□□ 0.39
GFAP-226ENST00000638304 TXNRD1Q16881 649 aa17.49■□□□□ 0.39
GFAP-226ENST00000638304 STK31Q9BXU1 1019 aa17.49■□□□□ 0.39
GFAP-226ENST00000638304 ZNF330Q9Y3S2 320 aaPredicted RBP17.49■□□□□ 0.39
GFAP-226ENST00000638304 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
GFAP-226ENST00000638304 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
GFAP-226ENST00000638304 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
GFAP-226ENST00000638304 AMIGO3Q86WK7 504 aa17.48■□□□□ 0.39
GFAP-226ENST00000638304 STARD3NLO95772 234 aa17.48■□□□□ 0.39
GFAP-226ENST00000638304 EZH2Q15910 746 aaKnown RBP17.48■□□□□ 0.39
GFAP-226ENST00000638304 INTS5Q6P9B9 1019 aaKnown RBP17.48■□□□□ 0.39
GFAP-226ENST00000638304 ZNF428Q96B54 188 aa17.48■□□□□ 0.39
GFAP-226ENST00000638304 DBF4Q9UBU7 674 aaPredicted RBP17.48■□□□□ 0.39
GFAP-226ENST00000638304 SOS1Q07889 1333 aaPredicted RBP17.48■□□□□ 0.39
GFAP-226ENST00000638304 PLSCR1O15162 318 aa17.47■□□□□ 0.39
GFAP-226ENST00000638304 RRP1P56182 461 aaKnown RBP17.47■□□□□ 0.39
GFAP-226ENST00000638304 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
GFAP-226ENST00000638304 CLUAP1Q96AJ1 413 aa17.47■□□□□ 0.39
GFAP-226ENST00000638304 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
GFAP-226ENST00000638304 TEX13AQ9BXU3 409 aaPredicted RBP17.46■□□□□ 0.39
GFAP-226ENST00000638304 LY75O60449 1722 aa17.46■□□□□ 0.39
GFAP-226ENST00000638304 FLIIQ13045 1269 aa17.45■□□□□ 0.38
GFAP-226ENST00000638304 F6X3S4 739 aa17.45■□□□□ 0.38
GFAP-226ENST00000638304 XAGE3Q8WTP9 111 aa17.45■□□□□ 0.38
GFAP-226ENST00000638304 CAMKK2Q96RR4 588 aa17.45■□□□□ 0.38
GFAP-226ENST00000638304 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
GFAP-226ENST00000638304 LAMB4A4D0S4 1761 aa17.44■□□□□ 0.38
GFAP-226ENST00000638304 RLBP1P12271 317 aa17.44■□□□□ 0.38
GFAP-226ENST00000638304 TRIM27P14373 513 aa17.44■□□□□ 0.38
GFAP-226ENST00000638304 RNF123Q5XPI4 1314 aa17.44■□□□□ 0.38
GFAP-226ENST00000638304 TTLL7Q6ZT98 887 aa17.44■□□□□ 0.38
GFAP-226ENST00000638304 COPS6Q7L5N1 327 aa17.44■□□□□ 0.38
GFAP-226ENST00000638304 MYH14Q7Z406 1995 aaKnown RBP17.43■□□□□ 0.38
GFAP-226ENST00000638304 BRPF1P55201 1214 aaPredicted RBP17.43■□□□□ 0.38
GFAP-226ENST00000638304 SF3B2Q13435 895 aaKnown RBP17.43■□□□□ 0.38
GFAP-226ENST00000638304 FKBP5Q13451 457 aaPredicted RBP17.43■□□□□ 0.38
GFAP-226ENST00000638304 PANK1Q8TE04 598 aa17.43■□□□□ 0.38
GFAP-226ENST00000638304 SLC27A3Q5K4L6 730 aa17.42■□□□□ 0.38
GFAP-226ENST00000638304 ARXQ96QS3 562 aa17.42■□□□□ 0.38
GFAP-226ENST00000638304 HYPKQ9NX55 129 aa17.42■□□□□ 0.38
GFAP-226ENST00000638304 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
GFAP-226ENST00000638304 GNPATO15228 680 aa17.42■□□□□ 0.38
GFAP-226ENST00000638304 UPF1Q92900 1129 aaKnown RBP eCLIP17.42■□□□□ 0.38
GFAP-226ENST00000638304 ZNF827Q17R98 1081 aa17.41■□□□□ 0.38
GFAP-226ENST00000638304 ATF7IPQ6VMQ6 1270 aa17.41■□□□□ 0.38
GFAP-226ENST00000638304 COL5A3P25940 1745 aaPredicted RBP17.41■□□□□ 0.38
GFAP-226ENST00000638304 PI4KAP2A4QPH2 592 aa17.41■□□□□ 0.38
GFAP-226ENST00000638304 ZKSCAN2Q63HK3 967 aa17.41■□□□□ 0.38
GFAP-226ENST00000638304 PI4KAP1Q8N8J0 262 aa17.41■□□□□ 0.38
GFAP-226ENST00000638304 ERBB4Q15303 1308 aa17.4■□□□□ 0.38
GFAP-226ENST00000638304 PHF14O94880 888 aa17.4■□□□□ 0.38
GFAP-226ENST00000638304 BAG6P46379 1132 aa17.4■□□□□ 0.38
GFAP-226ENST00000638304 EIF5P55010 431 aaKnown RBP17.4■□□□□ 0.38
GFAP-226ENST00000638304 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
GFAP-226ENST00000638304 CNTNAP4Q9C0A0 1308 aa17.4■□□□□ 0.38
GFAP-226ENST00000638304 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.38
GFAP-226ENST00000638304 ZBTB3Q9H5J0 574 aa17.39■□□□□ 0.38
GFAP-226ENST00000638304 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.38
GFAP-226ENST00000638304 ADCY9O60503 1353 aa17.39■□□□□ 0.37
GFAP-226ENST00000638304 SRCAPQ6ZRS2 3230 aa17.39■□□□□ 0.37
GFAP-226ENST00000638304 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
GFAP-226ENST00000638304 IL6STP40189 918 aaPredicted RBP17.38■□□□□ 0.37
GFAP-226ENST00000638304 SLC4A10Q6U841 1118 aa17.38■□□□□ 0.37
GFAP-226ENST00000638304 AK7Q96M32 723 aa17.38■□□□□ 0.37
GFAP-226ENST00000638304 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
GFAP-226ENST00000638304 C4BP0C0L5 1744 aa17.38■□□□□ 0.37
GFAP-226ENST00000638304 TAF1LQ8IZX4 1826 aa17.38■□□□□ 0.37
GFAP-226ENST00000638304 TSHZ2Q9NRE2 1034 aa17.38■□□□□ 0.37
GFAP-226ENST00000638304 MAP3K2Q9Y2U5 619 aa17.38■□□□□ 0.37
GFAP-226ENST00000638304 RC3H1Q5TC82 1133 aaKnown RBP17.37■□□□□ 0.37
GFAP-226ENST00000638304 PTPRCP08575 1304 aa17.37■□□□□ 0.37
GFAP-226ENST00000638304 COL15A1P39059 1388 aa17.36■□□□□ 0.37
GFAP-226ENST00000638304 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
GFAP-226ENST00000638304 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
GFAP-226ENST00000638304 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
GFAP-226ENST00000638304 TMEM57Q8N5G2 664 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms