RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 APAF1O14727 1248 aa16.47■□□□□ 0.23
CLN6-225ENST00000638144 CANXP27824 592 aaKnown RBP16.47■□□□□ 0.23
CLN6-225ENST00000638144 POLD1P28340 1107 aa16.47■□□□□ 0.23
CLN6-225ENST00000638144 PIP4K2AP48426 406 aaPredicted RBP16.47■□□□□ 0.23
CLN6-225ENST00000638144 TRAPPC3LQ5T215 181 aa16.47■□□□□ 0.23
CLN6-225ENST00000638144 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
CLN6-225ENST00000638144 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
CLN6-225ENST00000638144 SRP68Q9UHB9 627 aaKnown RBP16.47■□□□□ 0.23
CLN6-225ENST00000638144 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
CLN6-225ENST00000638144 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.23
CLN6-225ENST00000638144 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.23
CLN6-225ENST00000638144 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
CLN6-225ENST00000638144 ZNF330Q9Y3S2 320 aaPredicted RBP16.46■□□□□ 0.23
CLN6-225ENST00000638144 RFC4P35249 363 aa16.45■□□□□ 0.22
CLN6-225ENST00000638144 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
CLN6-225ENST00000638144 USP16Q9Y5T5 823 aa16.45■□□□□ 0.22
CLN6-225ENST00000638144 COL15A1P39059 1388 aa16.45■□□□□ 0.22
CLN6-225ENST00000638144 STARD3NLO95772 234 aa16.44■□□□□ 0.22
CLN6-225ENST00000638144 A1BGP04217 495 aa16.44■□□□□ 0.22
CLN6-225ENST00000638144 ADRA2BP18089 450 aa16.44■□□□□ 0.22
CLN6-225ENST00000638144 TSPYL4Q9UJ04 414 aa16.44■□□□□ 0.22
CLN6-225ENST00000638144 LAS1LQ9Y4W2 734 aaKnown RBP16.44■□□□□ 0.22
CLN6-225ENST00000638144 USP42Q9H9J4 1324 aaKnown RBP16.43■□□□□ 0.22
CLN6-225ENST00000638144 SNRPA1P09661 255 aaKnown RBP16.42■□□□□ 0.22
CLN6-225ENST00000638144 GYS1P13807 737 aa16.42■□□□□ 0.22
CLN6-225ENST00000638144 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
CLN6-225ENST00000638144 MMP10P09238 476 aa16.41■□□□□ 0.22
CLN6-225ENST00000638144 EIF4A1P60842 406 aaKnown RBP16.41■□□□□ 0.22
CLN6-225ENST00000638144 FKBP8Q14318 412 aa16.41■□□□□ 0.22
CLN6-225ENST00000638144 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
CLN6-225ENST00000638144 SYT17Q9BSW7 474 aa16.41■□□□□ 0.22
CLN6-225ENST00000638144 TEX13AQ9BXU3 409 aaPredicted RBP16.41■□□□□ 0.22
CLN6-225ENST00000638144 SCN7AQ01118 1682 aa16.4■□□□□ 0.22
CLN6-225ENST00000638144 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
CLN6-225ENST00000638144 EIF5P55010 431 aaKnown RBP16.39■□□□□ 0.21
CLN6-225ENST00000638144 KRT24Q2M2I5 525 aa16.39■□□□□ 0.21
CLN6-225ENST00000638144 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
CLN6-225ENST00000638144 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
CLN6-225ENST00000638144 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
CLN6-225ENST00000638144 ZPR1O75312 459 aa16.38■□□□□ 0.21
CLN6-225ENST00000638144 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
CLN6-225ENST00000638144 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
CLN6-225ENST00000638144 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
CLN6-225ENST00000638144 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
CLN6-225ENST00000638144 DDR1Q08345 913 aa16.37■□□□□ 0.21
CLN6-225ENST00000638144 BCL2L12Q9HB09 334 aa16.37■□□□□ 0.21
CLN6-225ENST00000638144 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
CLN6-225ENST00000638144 GOLGB1Q14789 3259 aaKnown RBP16.36■□□□□ 0.21
CLN6-225ENST00000638144 CHL1O00533 1208 aa16.36■□□□□ 0.21
CLN6-225ENST00000638144 IL6STP40189 918 aaPredicted RBP16.36■□□□□ 0.21
CLN6-225ENST00000638144 NLGN1Q8N2Q7 840 aa16.36■□□□□ 0.21
CLN6-225ENST00000638144 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
CLN6-225ENST00000638144 WWC3Q9ULE0 1092 aa16.36■□□□□ 0.21
CLN6-225ENST00000638144 EIF2S2P20042 333 aaKnown RBP16.35■□□□□ 0.21
CLN6-225ENST00000638144 BICDL1Q6ZP65 573 aa16.35■□□□□ 0.21
CLN6-225ENST00000638144 NGEFQ8N5V2 710 aa16.35■□□□□ 0.21
CLN6-225ENST00000638144 MBIPQ9NS73 344 aa16.35■□□□□ 0.21
CLN6-225ENST00000638144 AFDNP55196 1824 aaKnown RBP16.35■□□□□ 0.21
CLN6-225ENST00000638144 N4BP2Q86UW6 1770 aaPredicted RBP16.33■□□□□ 0.21
CLN6-225ENST00000638144 A0A087WZG4 1122 aa16.33■□□□□ 0.2
CLN6-225ENST00000638144 ANXA1P04083 346 aa16.33■□□□□ 0.2
CLN6-225ENST00000638144 MYL6BP14649 208 aa16.33■□□□□ 0.2
CLN6-225ENST00000638144 NFIXQ14938 502 aa16.33■□□□□ 0.2
CLN6-225ENST00000638144 NPM2Q86SE8 214 aaKnown RBP16.33■□□□□ 0.2
CLN6-225ENST00000638144 DZIP3Q86Y13 1208 aaKnown RBP16.33■□□□□ 0.2
CLN6-225ENST00000638144 PELP1Q8IZL8 1130 aaKnown RBP16.33■□□□□ 0.2
CLN6-225ENST00000638144 CFAP44Q96MT7 982 aa16.33■□□□□ 0.2
CLN6-225ENST00000638144 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
CLN6-225ENST00000638144 PARP3Q9Y6F1 533 aa16.33■□□□□ 0.2
CLN6-225ENST00000638144 KIAA1551Q9HCM1 1747 aa16.33■□□□□ 0.2
CLN6-225ENST00000638144 KIF13BQ9NQT8 1826 aa16.33■□□□□ 0.2
CLN6-225ENST00000638144 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
CLN6-225ENST00000638144 PROSER3Q2NL68 480 aa16.32■□□□□ 0.2
CLN6-225ENST00000638144 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
CLN6-225ENST00000638144 C10orf71Q711Q0 1435 aa16.32■□□□□ 0.2
CLN6-225ENST00000638144 POLRMTO00411 1230 aaKnown RBP16.31■□□□□ 0.2
CLN6-225ENST00000638144 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
CLN6-225ENST00000638144 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
CLN6-225ENST00000638144 WWC1Q8IX03 1113 aa16.31■□□□□ 0.2
CLN6-225ENST00000638144 TSR2Q969E8 191 aaKnown RBP16.31■□□□□ 0.2
CLN6-225ENST00000638144 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
CLN6-225ENST00000638144 TM4SF1P30408 202 aa16.3■□□□□ 0.2
CLN6-225ENST00000638144 GNAI1P63096 354 aa16.3■□□□□ 0.2
CLN6-225ENST00000638144 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
CLN6-225ENST00000638144 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
CLN6-225ENST00000638144 NRXN2Q9P2S2 1712 aa16.29■□□□□ 0.2
CLN6-225ENST00000638144 UTRNP46939 3433 aa16.29■□□□□ 0.2
CLN6-225ENST00000638144 ELL2O00472 640 aaPredicted RBP16.29■□□□□ 0.2
CLN6-225ENST00000638144 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
CLN6-225ENST00000638144 TTLL7Q6ZT98 887 aa16.29■□□□□ 0.2
CLN6-225ENST00000638144 NUP98P52948 1817 aa16.29■□□□□ 0.2
CLN6-225ENST00000638144 CARMIL3Q8ND23 1372 aa16.28■□□□□ 0.2
CLN6-225ENST00000638144 PDIA6Q15084 440 aa16.28■□□□□ 0.2
CLN6-225ENST00000638144 DUSP27Q5VZP5 1158 aa16.28■□□□□ 0.2
CLN6-225ENST00000638144 MIER1Q8N108 512 aa16.28■□□□□ 0.2
CLN6-225ENST00000638144 CCDC24Q8N4L8 307 aa16.28■□□□□ 0.2
CLN6-225ENST00000638144 SERPINB2P05120 415 aa16.27■□□□□ 0.2
CLN6-225ENST00000638144 HLFQ16534 295 aa16.27■□□□□ 0.2
CLN6-225ENST00000638144 GPR162Q16538 588 aa16.27■□□□□ 0.2
CLN6-225ENST00000638144 CCDC27Q2M243 656 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms