RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 SLC39A6Q13433 755 aa9.27□□□□□ -0.93
MECP2-225ENST00000638041 DNAJC10Q8IXB1 793 aa9.27□□□□□ -0.93
MECP2-225ENST00000638041 NGEFQ8N5V2 710 aa9.27□□□□□ -0.93
MECP2-225ENST00000638041 SETDB2Q96T68 719 aa9.27□□□□□ -0.93
MECP2-225ENST00000638041 PRKRIP1Q9H875 184 aaPredicted RBP9.27□□□□□ -0.93
MECP2-225ENST00000638041 NARFQ9UHQ1 456 aa9.27□□□□□ -0.93
MECP2-225ENST00000638041 TSPYL4Q9UJ04 414 aa9.27□□□□□ -0.93
MECP2-225ENST00000638041 COL15A1P39059 1388 aa9.26□□□□□ -0.93
MECP2-225ENST00000638041 CEMIPQ8WUJ3 1361 aa9.26□□□□□ -0.93
MECP2-225ENST00000638041 CYP19A1P11511 503 aaPredicted RBP9.26□□□□□ -0.93
MECP2-225ENST00000638041 HSP90B1P14625 803 aaKnown RBP9.26□□□□□ -0.93
MECP2-225ENST00000638041 PDE6BP35913 854 aa9.26□□□□□ -0.93
MECP2-225ENST00000638041 CLEC4GQ6UXB4 293 aa9.26□□□□□ -0.93
MECP2-225ENST00000638041 MCM10Q7L590 875 aa9.26□□□□□ -0.93
MECP2-225ENST00000638041 IL17REQ8NFR9 667 aa9.26□□□□□ -0.93
MECP2-225ENST00000638041 NYXQ9GZU5 481 aa9.26□□□□□ -0.93
MECP2-225ENST00000638041 ERBB4Q15303 1308 aa9.26□□□□□ -0.93
MECP2-225ENST00000638041 USP42Q9H9J4 1324 aaKnown RBP9.26□□□□□ -0.93
MECP2-225ENST00000638041 SOGA3Q5TF21 947 aa9.25□□□□□ -0.93
MECP2-225ENST00000638041 PHACTR3Q96KR7 559 aa9.25□□□□□ -0.93
MECP2-225ENST00000638041 SGIP1Q9BQI5 828 aa9.25□□□□□ -0.93
MECP2-225ENST00000638041 RNF216Q9NWF9 866 aaPredicted RBP9.25□□□□□ -0.93
MECP2-225ENST00000638041 PIM2Q9P1W9 311 aa9.25□□□□□ -0.93
MECP2-225ENST00000638041 H0YIN7 160 aa9.24□□□□□ -0.93
MECP2-225ENST00000638041 GYS1P13807 737 aa9.24□□□□□ -0.93
MECP2-225ENST00000638041 HOXD11P31277 338 aaPredicted RBP9.24□□□□□ -0.93
MECP2-225ENST00000638041 TMPOP42166 694 aaKnown RBP9.24□□□□□ -0.93
MECP2-225ENST00000638041 HSP90AB3PQ58FF7 597 aa9.24□□□□□ -0.93
MECP2-225ENST00000638041 TPTE2Q6XPS3 522 aa9.24□□□□□ -0.93
MECP2-225ENST00000638041 ZNF496Q96IT1 587 aaPredicted RBP9.24□□□□□ -0.93
MECP2-225ENST00000638041 PDGFDQ9GZP0 370 aaPredicted RBP9.24□□□□□ -0.93
MECP2-225ENST00000638041 SOS1Q07889 1333 aaPredicted RBP9.24□□□□□ -0.93
MECP2-225ENST00000638041 CICQ96RK0 1608 aaPredicted RBP9.23□□□□□ -0.93
MECP2-225ENST00000638041 UBR3Q6ZT12 1888 aa9.23□□□□□ -0.93
MECP2-225ENST00000638041 GNAI1P63096 354 aa9.23□□□□□ -0.93
MECP2-225ENST00000638041 NEUROD2Q15784 382 aa9.23□□□□□ -0.93
MECP2-225ENST00000638041 DALRD3Q5D0E6 543 aaKnown RBP9.23□□□□□ -0.93
MECP2-225ENST00000638041 USPL1Q5W0Q7 1092 aa9.23□□□□□ -0.93
MECP2-225ENST00000638041 DZIP3Q86Y13 1208 aaKnown RBP9.23□□□□□ -0.93
MECP2-225ENST00000638041 LAS1LQ9Y4W2 734 aaKnown RBP9.23□□□□□ -0.93
MECP2-225ENST00000638041 CARMIL3Q8ND23 1372 aa9.23□□□□□ -0.93
MECP2-225ENST00000638041 COL5A3P25940 1745 aaPredicted RBP9.22□□□□□ -0.93
MECP2-225ENST00000638041 VIRMAQ69YN4 1812 aaKnown RBP9.22□□□□□ -0.93
MECP2-225ENST00000638041 HOXB7P09629 217 aa9.22□□□□□ -0.93
MECP2-225ENST00000638041 INTS5Q6P9B9 1019 aaKnown RBP9.22□□□□□ -0.93
MECP2-225ENST00000638041 PPP1R42Q7Z4L9 355 aa9.22□□□□□ -0.93
MECP2-225ENST00000638041 CNBD1Q8NA66 436 aa9.22□□□□□ -0.93
MECP2-225ENST00000638041 PLEKHF1Q96S99 279 aa9.22□□□□□ -0.93
MECP2-225ENST00000638041 MRS2Q9HD23 443 aa9.22□□□□□ -0.93
MECP2-225ENST00000638041 ZBTB1Q9Y2K1 713 aa9.22□□□□□ -0.93
MECP2-225ENST00000638041 ADAMTS7Q9UKP4 1686 aa9.21□□□□□ -0.93
MECP2-225ENST00000638041 ERVV-1B6SEH8 477 aa9.21□□□□□ -0.94
MECP2-225ENST00000638041 DDX58O95786 925 aaKnown RBP9.21□□□□□ -0.94
MECP2-225ENST00000638041 SERPINB2P05120 415 aa9.21□□□□□ -0.94
MECP2-225ENST00000638041 EIF5P55010 431 aaKnown RBP9.21□□□□□ -0.94
MECP2-225ENST00000638041 GRIPAP1Q4V328 841 aa9.21□□□□□ -0.94
MECP2-225ENST00000638041 NBPF5PQ86XG9 351 aaPredicted RBP9.21□□□□□ -0.94
MECP2-225ENST00000638041 CNKSR1Q969H4 720 aa9.21□□□□□ -0.94
MECP2-225ENST00000638041 BCS1LQ9Y276 419 aa9.21□□□□□ -0.94
MECP2-225ENST00000638041 TUBGCP6Q96RT7 1819 aa9.2□□□□□ -0.94
MECP2-225ENST00000638041 ALDH1B1P30837 517 aa9.2□□□□□ -0.94
MECP2-225ENST00000638041 DCTN1Q14203 1278 aa9.2□□□□□ -0.94
MECP2-225ENST00000638041 SLC4A9Q96Q91 983 aa9.2□□□□□ -0.94
MECP2-225ENST00000638041 ADAMTS8Q9UP79 889 aa9.2□□□□□ -0.94
MECP2-225ENST00000638041 COL24A1Q17RW2 1714 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 GIGYF1O75420 1035 aaPredicted RBP9.19□□□□□ -0.94
MECP2-225ENST00000638041 FKBP8Q14318 412 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 PARP10Q53GL7 1025 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 BICDL1Q6ZP65 573 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 ARHGAP27Q6ZUM4 889 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 CCDC146Q8IYE0 955 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 C16orf71Q8IYS4 520 aaPredicted RBP9.19□□□□□ -0.94
MECP2-225ENST00000638041 TTLL6Q8N841 843 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 CFAP44Q96MT7 982 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 BRIP1Q9BX63 1249 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 STK31Q9BXU1 1019 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 HYPKQ9NX55 129 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 TBC1D2BQ9UPU7 963 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 RRP7AQ9Y3A4 280 aaKnown RBP9.19□□□□□ -0.94
MECP2-225ENST00000638041 KCPQ6ZWJ8 1503 aa9.19□□□□□ -0.94
MECP2-225ENST00000638041 A1BGP04217 495 aa9.18□□□□□ -0.94
MECP2-225ENST00000638041 C4AP0C0L4 1744 aa9.18□□□□□ -0.94
MECP2-225ENST00000638041 EIF2S2P20042 333 aaKnown RBP9.18□□□□□ -0.94
MECP2-225ENST00000638041 TM4SF1P30408 202 aa9.18□□□□□ -0.94
MECP2-225ENST00000638041 EIF4A1P60842 406 aaKnown RBP9.18□□□□□ -0.94
MECP2-225ENST00000638041 CHD4Q14839 1912 aa9.18□□□□□ -0.94
MECP2-225ENST00000638041 RNF123Q5XPI4 1314 aa9.18□□□□□ -0.94
MECP2-225ENST00000638041 UBR2Q8IWV8 1755 aa9.18□□□□□ -0.94
MECP2-225ENST00000638041 ZNF622Q969S3 477 aaKnown RBP eCLIP9.18□□□□□ -0.94
MECP2-225ENST00000638041 IFT57Q9NWB7 429 aa9.18□□□□□ -0.94
MECP2-225ENST00000638041 DBF4Q9UBU7 674 aaPredicted RBP9.18□□□□□ -0.94
MECP2-225ENST00000638041 SRP68Q9UHB9 627 aaKnown RBP9.18□□□□□ -0.94
MECP2-225ENST00000638041 NIP7Q9Y221 180 aaKnown RBP eCLIP9.18□□□□□ -0.94
MECP2-225ENST00000638041 USP16Q9Y5T5 823 aa9.18□□□□□ -0.94
MECP2-225ENST00000638041 TJP1Q07157 1748 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 KDM2BQ8NHM5 1336 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 POLRMTO00411 1230 aaKnown RBP9.17□□□□□ -0.94
MECP2-225ENST00000638041 MYL6BP14649 208 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 GOLGA2Q08379 1002 aa9.17□□□□□ -0.94
MECP2-225ENST00000638041 NFIXQ14938 502 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms