RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	PRAMEF22	A3QJZ6	481 aa		28.96	■■■□□ 2.23
CHRNA7-231	ENST00000637786	KRT24	Q2M2I5	525 aa		28.96	■■■□□ 2.23
CHRNA7-231	ENST00000637786	NBPF14	Q5TI25	921 aa		28.96	■■■□□ 2.23
CHRNA7-231	ENST00000637786	C8orf58	Q8NAV2	365 aa		28.96	■■■□□ 2.23
CHRNA7-231	ENST00000637786	AKT1S1	Q96B36	256 aa		28.96	■■■□□ 2.23
CHRNA7-231	ENST00000637786	CRKL	P46109	303 aa	Known RBP	28.95	■■■□□ 2.22
CHRNA7-231	ENST00000637786	CHMP4A	Q9BY43	222 aa		28.94	■■■□□ 2.22
CHRNA7-231	ENST00000637786	CCDC87	Q9NVE4	849 aa		28.94	■■■□□ 2.22
CHRNA7-231	ENST00000637786	STK32B	Q9NY57	414 aa		28.94	■■■□□ 2.22
CHRNA7-231	ENST00000637786	QSER1	Q2KHR3	1735 aa		28.94	■■■□□ 2.22
CHRNA7-231	ENST00000637786	UBR3	Q6ZT12	1888 aa		28.93	■■■□□ 2.22
CHRNA7-231	ENST00000637786	AK7	Q96M32	723 aa		28.93	■■■□□ 2.22
CHRNA7-231	ENST00000637786	ANO8	Q9HCE9	1232 aa	Predicted RBP	28.93	■■■□□ 2.22
CHRNA7-231	ENST00000637786	EXOSC9	Q06265	439 aa	Known RBP	28.92	■■■□□ 2.22
CHRNA7-231	ENST00000637786	SLC15A2	Q16348	729 aa		28.92	■■■□□ 2.22
CHRNA7-231	ENST00000637786	ZNF827	Q17R98	1081 aa		28.92	■■■□□ 2.22
CHRNA7-231	ENST00000637786	INTS5	Q6P9B9	1019 aa	Known RBP	28.92	■■■□□ 2.22
CHRNA7-231	ENST00000637786	ERBB4	Q15303	1308 aa		28.92	■■■□□ 2.22
CHRNA7-231	ENST00000637786	TWISTNB	Q3B726	338 aa	Predicted RBP	28.91	■■■□□ 2.22
CHRNA7-231	ENST00000637786	TSPYL6	Q8N831	410 aa		28.91	■■■□□ 2.22
CHRNA7-231	ENST00000637786	TUBGCP6	Q96RT7	1819 aa		28.9	■■■□□ 2.22
CHRNA7-231	ENST00000637786	RPS6KA4	O75676	772 aa		28.89	■■■□□ 2.22
CHRNA7-231	ENST00000637786	YTHDC1	Q96MU7	727 aa	Known RBP	28.89	■■■□□ 2.22
CHRNA7-231	ENST00000637786	ELL2	O00472	640 aa	Predicted RBP	28.88	■■■□□ 2.21
CHRNA7-231	ENST00000637786	GNPAT	O15228	680 aa		28.88	■■■□□ 2.21
CHRNA7-231	ENST00000637786	HDGFL1	Q5TGJ6	251 aa		28.88	■■■□□ 2.21
CHRNA7-231	ENST00000637786	ZBTB1	Q9Y2K1	713 aa		28.88	■■■□□ 2.21
CHRNA7-231	ENST00000637786	EIF2S2	P20042	333 aa	Known RBP	28.87	■■■□□ 2.21
CHRNA7-231	ENST00000637786	TFCP2L1	Q9NZI6	479 aa		28.87	■■■□□ 2.21
CHRNA7-231	ENST00000637786	RTCB	Q9Y3I0	505 aa	Known RBP	28.87	■■■□□ 2.21
CHRNA7-231	ENST00000637786	VAMP4	O75379	141 aa		28.86	■■■□□ 2.21
CHRNA7-231	ENST00000637786	A1BG	P04217	495 aa		28.86	■■■□□ 2.21
CHRNA7-231	ENST00000637786	CT47B1	P0C2W7	299 aa	Predicted RBP	28.86	■■■□□ 2.21
CHRNA7-231	ENST00000637786	SSFA2	P28290	1259 aa		28.86	■■■□□ 2.21
CHRNA7-231	ENST00000637786	CACNA1F	O60840	1977 aa		28.85	■■■□□ 2.21
CHRNA7-231	ENST00000637786	ADRA2B	P18089	450 aa		28.85	■■■□□ 2.21
CHRNA7-231	ENST00000637786	IL6ST	P40189	918 aa	Predicted RBP	28.85	■■■□□ 2.21
CHRNA7-231	ENST00000637786	FLAD1	Q8NFF5	587 aa		28.85	■■■□□ 2.21
CHRNA7-231	ENST00000637786	CCDC30	Q5VVM6	783 aa		28.84	■■■□□ 2.21
CHRNA7-231	ENST00000637786	NBPF26	B4DH59	902 aa		28.83	■■■□□ 2.21
CHRNA7-231	ENST00000637786	CANX	P27824	592 aa	Known RBP	28.83	■■■□□ 2.21
CHRNA7-231	ENST00000637786	EIF5	P55010	431 aa	Known RBP	28.83	■■■□□ 2.21
CHRNA7-231	ENST00000637786	NBPF10	Q6P3W6	841 aa	Known RBP	28.83	■■■□□ 2.21
CHRNA7-231	ENST00000637786	NBPF15	Q8N660	670 aa		28.83	■■■□□ 2.21
CHRNA7-231	ENST00000637786	ZNF428	Q96B54	188 aa		28.83	■■■□□ 2.21
CHRNA7-231	ENST00000637786	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.82	■■■□□ 2.2
CHRNA7-231	ENST00000637786	DBF4	Q9UBU7	674 aa	Predicted RBP	28.82	■■■□□ 2.2
CHRNA7-231	ENST00000637786	PNPLA7	Q6ZV29	1317 aa		28.81	■■■□□ 2.2
CHRNA7-231	ENST00000637786	PDIA6	Q15084	440 aa		28.81	■■■□□ 2.2
CHRNA7-231	ENST00000637786	AMIGO3	Q86WK7	504 aa		28.81	■■■□□ 2.2
CHRNA7-231	ENST00000637786	COL15A1	P39059	1388 aa		28.8	■■■□□ 2.2
CHRNA7-231	ENST00000637786	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	28.8	■■■□□ 2.2
CHRNA7-231	ENST00000637786	NECTIN2	Q92692	538 aa		28.8	■■■□□ 2.2
CHRNA7-231	ENST00000637786	TRAPPC3L	Q5T215	181 aa		28.79	■■■□□ 2.2
CHRNA7-231	ENST00000637786	CHPF2	Q9P2E5	772 aa		28.79	■■■□□ 2.2
CHRNA7-231	ENST00000637786	C4A	P0C0L4	1744 aa		28.79	■■■□□ 2.2
CHRNA7-231	ENST00000637786		A0A087WZG4	1122 aa		28.78	■■■□□ 2.2
CHRNA7-231	ENST00000637786	LRP10	Q7Z4F1	713 aa		28.78	■■■□□ 2.2
CHRNA7-231	ENST00000637786	NPM2	Q86SE8	214 aa	Known RBP	28.78	■■■□□ 2.2
CHRNA7-231	ENST00000637786	PIP4K2A	P48426	406 aa	Predicted RBP	28.77	■■■□□ 2.2
CHRNA7-231	ENST00000637786	R3HDM1	Q15032	1099 aa	Known RBP	28.77	■■■□□ 2.2
CHRNA7-231	ENST00000637786	STK31	Q9BXU1	1019 aa		28.77	■■■□□ 2.2
CHRNA7-231	ENST00000637786	HYPK	Q9NX55	129 aa		28.77	■■■□□ 2.2
CHRNA7-231	ENST00000637786	CASZ1	Q86V15	1759 aa		28.76	■■■□□ 2.19
CHRNA7-231	ENST00000637786	PHF14	O94880	888 aa		28.76	■■■□□ 2.19
CHRNA7-231	ENST00000637786	ARHGEF1	Q92888	912 aa	Known RBP	28.76	■■■□□ 2.19
CHRNA7-231	ENST00000637786	MYL6B	P14649	208 aa		28.75	■■■□□ 2.19
CHRNA7-231	ENST00000637786	PROSER3	Q2NL68	480 aa		28.75	■■■□□ 2.19
CHRNA7-231	ENST00000637786	COL23A1	Q86Y22	540 aa	Predicted RBP	28.75	■■■□□ 2.19
CHRNA7-231	ENST00000637786	RFC4	P35249	363 aa		28.73	■■■□□ 2.19
CHRNA7-231	ENST00000637786	SMIM5	Q71RC9	77 aa		28.73	■■■□□ 2.19
CHRNA7-231	ENST00000637786	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.73	■■■□□ 2.19
CHRNA7-231	ENST00000637786	ANXA1	P04083	346 aa		28.72	■■■□□ 2.19
CHRNA7-231	ENST00000637786	ALDH1L2	Q3SY69	923 aa		28.72	■■■□□ 2.19
CHRNA7-231	ENST00000637786	NARF	Q9UHQ1	456 aa		28.72	■■■□□ 2.19
CHRNA7-231	ENST00000637786	USP42	Q9H9J4	1324 aa	Known RBP	28.71	■■■□□ 2.19
CHRNA7-231	ENST00000637786	SLC16A10	Q8TF71	515 aa		28.71	■■■□□ 2.19
CHRNA7-231	ENST00000637786	SCN7A	Q01118	1682 aa		28.7	■■■□□ 2.19
CHRNA7-231	ENST00000637786	BCOR	Q6W2J9	1755 aa		28.7	■■■□□ 2.19
CHRNA7-231	ENST00000637786	PSD	A5PKW4	1024 aa	Predicted RBP	28.7	■■■□□ 2.18
CHRNA7-231	ENST00000637786	RGL2	O15211	777 aa		28.7	■■■□□ 2.18
CHRNA7-231	ENST00000637786	SLC4A2	P04920	1241 aa		28.7	■■■□□ 2.18
CHRNA7-231	ENST00000637786	DZIP3	Q86Y13	1208 aa	Known RBP	28.7	■■■□□ 2.18
CHRNA7-231	ENST00000637786	TCERG1	O14776	1098 aa	Known RBP	28.68	■■■□□ 2.18
CHRNA7-231	ENST00000637786	ZPR1	O75312	459 aa		28.68	■■■□□ 2.18
CHRNA7-231	ENST00000637786	COPS6	Q7L5N1	327 aa		28.68	■■■□□ 2.18
CHRNA7-231	ENST00000637786	XAGE3	Q8WTP9	111 aa		28.68	■■■□□ 2.18
CHRNA7-231	ENST00000637786	MSH5	O43196	834 aa		28.67	■■■□□ 2.18
CHRNA7-231	ENST00000637786	KIF6	Q6ZMV9	814 aa		28.67	■■■□□ 2.18
CHRNA7-231	ENST00000637786	SSH1	Q8WYL5	1049 aa		28.67	■■■□□ 2.18
CHRNA7-231	ENST00000637786	TBC1D2B	Q9UPU7	963 aa		28.67	■■■□□ 2.18
CHRNA7-231	ENST00000637786	ERVV-1	B6SEH8	477 aa		28.66	■■■□□ 2.18
CHRNA7-231	ENST00000637786	CAMTA2	O94983	1202 aa		28.66	■■■□□ 2.18
CHRNA7-231	ENST00000637786	RARS	P54136	660 aa	Known RBP	28.66	■■■□□ 2.18
CHRNA7-231	ENST00000637786	PDGFD	Q9GZP0	370 aa	Predicted RBP	28.66	■■■□□ 2.18
CHRNA7-231	ENST00000637786	MAP3K15	Q6ZN16	1313 aa		28.66	■■■□□ 2.18
CHRNA7-231	ENST00000637786	BRPF1	P55201	1214 aa	Predicted RBP	28.65	■■■□□ 2.18
CHRNA7-231	ENST00000637786	TTLL7	Q6ZT98	887 aa		28.65	■■■□□ 2.18
CHRNA7-231	ENST00000637786	PHAX	Q9H814	394 aa	Known RBP	28.65	■■■□□ 2.18
CHRNA7-231	ENST00000637786	COL24A1	Q17RW2	1714 aa		28.64	■■■□□ 2.18

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