RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 SMC3Q9UQE7 1217 aa24.28■■□□□ 1.48
CACNA1A-243ENST00000637616 UBE2HP62256 183 aa24.27■■□□□ 1.48
CACNA1A-243ENST00000637616 CCDC83Q8IWF9 413 aa24.27■■□□□ 1.48
CACNA1A-243ENST00000637616 PYCARDQ9ULZ3 195 aa24.27■■□□□ 1.48
CACNA1A-243ENST00000637616 UBTFL1P0CB47 393 aaPredicted RBP24.27■■□□□ 1.48
CACNA1A-243ENST00000637616 SMAP1Q8IYB5 467 aaPredicted RBP24.27■■□□□ 1.48
CACNA1A-243ENST00000637616 F13A1P00488 732 aa24.26■■□□□ 1.47
CACNA1A-243ENST00000637616 PPP1R42Q7Z4L9 355 aa24.26■■□□□ 1.47
CACNA1A-243ENST00000637616 PHAXQ9H814 394 aaKnown RBP24.26■■□□□ 1.47
CACNA1A-243ENST00000637616 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
CACNA1A-243ENST00000637616 CASTP20810 708 aaKnown RBP24.26■■□□□ 1.47
CACNA1A-243ENST00000637616 PRIMPOLQ96LW4 560 aa24.25■■□□□ 1.47
CACNA1A-243ENST00000637616 TTC14Q96N46 770 aa24.25■■□□□ 1.47
CACNA1A-243ENST00000637616 DLC1Q96QB1 1528 aa24.25■■□□□ 1.47
CACNA1A-243ENST00000637616 SGSM2O43147 1006 aa24.25■■□□□ 1.47
CACNA1A-243ENST00000637616 PPP4R3BQ5MIZ7 849 aa24.25■■□□□ 1.47
CACNA1A-243ENST00000637616 CCDC30Q5VVM6 783 aa24.25■■□□□ 1.47
CACNA1A-243ENST00000637616 TMEM87AQ8NBN3 555 aa24.25■■□□□ 1.47
CACNA1A-243ENST00000637616 KCNF1Q9H3M0 494 aa24.25■■□□□ 1.47
CACNA1A-243ENST00000637616 LIMCH1Q9UPQ0 1083 aa24.25■■□□□ 1.47
CACNA1A-243ENST00000637616 KIF3AQ9Y496 699 aa24.24■■□□□ 1.47
CACNA1A-243ENST00000637616 NEO1Q92859 1461 aa24.24■■□□□ 1.47
CACNA1A-243ENST00000637616 PI4K2BQ8TCG2 481 aa24.24■■□□□ 1.47
CACNA1A-243ENST00000637616 LSG1Q9H089 658 aaKnown RBP24.24■■□□□ 1.47
CACNA1A-243ENST00000637616 RAD50Q92878 1312 aa24.24■■□□□ 1.47
CACNA1A-243ENST00000637616 SPDYE4A6NLX3 237 aa24.24■■□□□ 1.47
CACNA1A-243ENST00000637616 ATP2B3Q16720 1220 aa24.24■■□□□ 1.47
CACNA1A-243ENST00000637616 SSH2Q76I76 1423 aa24.23■■□□□ 1.47
CACNA1A-243ENST00000637616 VPS37CA5D8V6 355 aaPredicted RBP24.23■■□□□ 1.47
CACNA1A-243ENST00000637616 GJB2P29033 226 aa24.23■■□□□ 1.47
CACNA1A-243ENST00000637616 BCL2L12Q9HB09 334 aa24.23■■□□□ 1.47
CACNA1A-243ENST00000637616 FAM173BQ6P4H8 233 aa24.23■■□□□ 1.47
CACNA1A-243ENST00000637616 RHPN1Q8TCX5 695 aa24.23■■□□□ 1.47
CACNA1A-243ENST00000637616 EYA1Q99502 592 aa24.23■■□□□ 1.47
CACNA1A-243ENST00000637616 RIMS1Q86UR5 1692 aaKnown RBP24.23■■□□□ 1.47
CACNA1A-243ENST00000637616 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
CACNA1A-243ENST00000637616 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
CACNA1A-243ENST00000637616 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
CACNA1A-243ENST00000637616 HMGN5P82970 282 aaKnown RBP24.22■■□□□ 1.47
CACNA1A-243ENST00000637616 CAMK4Q16566 473 aa24.22■■□□□ 1.47
CACNA1A-243ENST00000637616 ADCK5Q3MIX3 580 aa24.22■■□□□ 1.47
CACNA1A-243ENST00000637616 SOS1Q07889 1333 aaPredicted RBP24.22■■□□□ 1.47
CACNA1A-243ENST00000637616 NECAB1Q8N987 351 aa24.22■■□□□ 1.47
CACNA1A-243ENST00000637616 SRGAP3O43295 1099 aa24.21■■□□□ 1.47
CACNA1A-243ENST00000637616 FUCA2Q9BTY2 467 aa24.21■■□□□ 1.47
CACNA1A-243ENST00000637616 FERMT3Q86UX7 667 aa24.21■■□□□ 1.47
CACNA1A-243ENST00000637616 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.21■■□□□ 1.47
CACNA1A-243ENST00000637616 SPTLC3Q9NUV7 552 aa24.2■■□□□ 1.46
CACNA1A-243ENST00000637616 NBPF7P0C2Y1 421 aaPredicted RBP24.2■■□□□ 1.46
CACNA1A-243ENST00000637616 EIF2S2P20042 333 aaKnown RBP24.2■■□□□ 1.46
CACNA1A-243ENST00000637616 BCL11BQ9C0K0 894 aaPredicted RBP24.2■■□□□ 1.46
CACNA1A-243ENST00000637616 LETM1O95202 739 aaPredicted RBP24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 ZSCAN20P17040 1043 aaPredicted RBP24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 PTH1RQ03431 593 aa24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 IL17RAQ96F46 866 aa24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 AMPHP49418 695 aa24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 COL9A3Q14050 684 aaPredicted RBP24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 KIAA1524Q8TCG1 905 aa24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 SSH3Q8TE77 659 aa24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 JAKMIP1Q96N16 626 aaKnown RBP24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 RIOK3O14730 519 aaKnown RBP24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 PRPF40BQ6NWY9 871 aaKnown RBP24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 HYPKQ9NX55 129 aa24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 MTMR6Q9Y217 621 aa24.19■■□□□ 1.46
CACNA1A-243ENST00000637616 LTV1Q96GA3 475 aaPredicted RBP24.18■■□□□ 1.46
CACNA1A-243ENST00000637616 GTF2F1P35269 517 aaKnown RBP eCLIP24.17■■□□□ 1.46
CACNA1A-243ENST00000637616 NUTM2GQ5VZR2 741 aa24.17■■□□□ 1.46
CACNA1A-243ENST00000637616 PEAK1Q9H792 1746 aa24.17■■□□□ 1.46
CACNA1A-243ENST00000637616 C3P01024 1663 aa24.17■■□□□ 1.46
CACNA1A-243ENST00000637616 CNTROBQ8N137 903 aa24.16■■□□□ 1.46
CACNA1A-243ENST00000637616 IL17REQ8NFR9 667 aa24.16■■□□□ 1.46
CACNA1A-243ENST00000637616 IGSF3O75054 1194 aa24.16■■□□□ 1.46
CACNA1A-243ENST00000637616 ANXA1P04083 346 aa24.16■■□□□ 1.46
CACNA1A-243ENST00000637616 PTGS1P23219 599 aa24.16■■□□□ 1.46
CACNA1A-243ENST00000637616 PDRG1Q9NUG6 133 aa24.16■■□□□ 1.46
CACNA1A-243ENST00000637616 TUBGCP6Q96RT7 1819 aa24.16■■□□□ 1.46
CACNA1A-243ENST00000637616 ROBO2Q9HCK4 1378 aa24.15■■□□□ 1.46
CACNA1A-243ENST00000637616 RICTORQ6R327 1708 aa24.15■■□□□ 1.46
CACNA1A-243ENST00000637616 MON2Q7Z3U7 1717 aa24.15■■□□□ 1.46
CACNA1A-243ENST00000637616 HDGFL1Q5TGJ6 251 aa24.15■■□□□ 1.46
CACNA1A-243ENST00000637616 LUZP1Q86V48 1076 aa24.15■■□□□ 1.46
CACNA1A-243ENST00000637616 CKAP2LQ8IYA6 745 aa24.15■■□□□ 1.46
CACNA1A-243ENST00000637616 TCEANC2Q96MN5 208 aa24.15■■□□□ 1.46
CACNA1A-243ENST00000637616 OS9Q13438 667 aaPredicted RBP24.15■■□□□ 1.46
CACNA1A-243ENST00000637616 ATP6V1DQ9Y5K8 247 aa24.15■■□□□ 1.46
CACNA1A-243ENST00000637616 ST3GAL1Q11201 340 aa24.14■■□□□ 1.46
CACNA1A-243ENST00000637616 NRKQ7Z2Y5 1582 aa24.14■■□□□ 1.46
CACNA1A-243ENST00000637616 OVOS2A0A0J9YW53 1432 aa24.14■■□□□ 1.45
CACNA1A-243ENST00000637616 OVOS2Q6IE36 1432 aa24.14■■□□□ 1.45
CACNA1A-243ENST00000637616 ME3Q16798 604 aa24.14■■□□□ 1.45
CACNA1A-243ENST00000637616 DIAPH3Q9NSV4 1193 aa24.14■■□□□ 1.45
CACNA1A-243ENST00000637616 GNAT3A8MTJ3 354 aa24.13■■□□□ 1.45
CACNA1A-243ENST00000637616 LIG1P18858 919 aa24.13■■□□□ 1.45
CACNA1A-243ENST00000637616 U2AF2P26368 475 aaKnown RBP eCLIP24.13■■□□□ 1.45
CACNA1A-243ENST00000637616 DMTNQ08495 405 aa24.13■■□□□ 1.45
CACNA1A-243ENST00000637616 PDCL2Q8N4E4 241 aa24.13■■□□□ 1.45
CACNA1A-243ENST00000637616 AOX1Q06278 1338 aa24.13■■□□□ 1.45
CACNA1A-243ENST00000637616 LRMPQ12912 555 aa24.12■■□□□ 1.45
CACNA1A-243ENST00000637616 KIF1BPQ96EK5 621 aa24.12■■□□□ 1.45
CACNA1A-243ENST00000637616 SETD1AO15047 1707 aaKnown RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms