RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 MAPTP10636 758 aaKnown RBP4.09□□□□□ -1.75
SCN1A-215ENST00000637285 TLR1Q15399 786 aa4.09□□□□□ -1.75
SCN1A-215ENST00000637285 ESCO1Q5FWF5 840 aa4.09□□□□□ -1.75
SCN1A-215ENST00000637285 KRTAP19-1Q8IUB9 90 aa4.09□□□□□ -1.75
SCN1A-215ENST00000637285 CDCA7Q9BWT1 371 aaPredicted RBP4.09□□□□□ -1.75
SCN1A-215ENST00000637285 FAM117AQ9C073 453 aa4.09□□□□□ -1.75
SCN1A-215ENST00000637285 GOLGA2P5Q9HBQ8 144 aa4.09□□□□□ -1.75
SCN1A-215ENST00000637285 DNAAF2Q9NVR5 837 aaKnown RBP4.09□□□□□ -1.75
SCN1A-215ENST00000637285 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
SCN1A-215ENST00000637285 STAU1O95793 577 aaKnown RBP4.08□□□□□ -1.76
SCN1A-215ENST00000637285 MCCD1P59942 119 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-215ENST00000637285 TNP2Q05952 138 aa4.08□□□□□ -1.76
SCN1A-215ENST00000637285 NR1H3Q13133 447 aa4.08□□□□□ -1.76
SCN1A-215ENST00000637285 ARSJQ5FYB0 599 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-215ENST00000637285 PPARGC1BQ86YN6 1023 aaKnown RBP4.08□□□□□ -1.76
SCN1A-215ENST00000637285 HCN2Q9UL51 889 aa4.08□□□□□ -1.76
SCN1A-215ENST00000637285 ZNF330Q9Y3S2 320 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-215ENST00000637285 A0A1W2PNR3 127 aa4.07□□□□□ -1.76
SCN1A-215ENST00000637285 ALAS2P22557 587 aa4.07□□□□□ -1.76
SCN1A-215ENST00000637285 LRP8Q14114 963 aa4.07□□□□□ -1.76
SCN1A-215ENST00000637285 FAM182BQ5T319 152 aa4.07□□□□□ -1.76
SCN1A-215ENST00000637285 NLRP8Q86W28 1048 aa4.07□□□□□ -1.76
SCN1A-215ENST00000637285 ZNF592Q92610 1267 aa4.07□□□□□ -1.76
SCN1A-215ENST00000637285 DDRGK1Q96HY6 314 aa4.07□□□□□ -1.76
SCN1A-215ENST00000637285 CCDC85AQ96PX6 553 aaPredicted RBP4.07□□□□□ -1.76
SCN1A-215ENST00000637285 GPBP1L1Q9HC44 474 aaPredicted RBP4.07□□□□□ -1.76
SCN1A-215ENST00000637285 AVENQ9NQS1 362 aaPredicted RBP4.07□□□□□ -1.76
SCN1A-215ENST00000637285 ELOA3CA0A087WX78 387 aaPredicted RBP4.06□□□□□ -1.76
SCN1A-215ENST00000637285 ELOA3DA6NLF2 546 aaPredicted RBP4.06□□□□□ -1.76
SCN1A-215ENST00000637285 HYAL3O43820 417 aaPredicted RBP4.06□□□□□ -1.76
SCN1A-215ENST00000637285 ATP4AP20648 1035 aa4.06□□□□□ -1.76
SCN1A-215ENST00000637285 TRIM28Q13263 835 aaKnown RBP4.06□□□□□ -1.76
SCN1A-215ENST00000637285 GRIK4Q16099 956 aa4.06□□□□□ -1.76
SCN1A-215ENST00000637285 ELOA3BQ3SY89 546 aa4.06□□□□□ -1.76
SCN1A-215ENST00000637285 ZNF468Q5VIY5 522 aaPredicted RBP4.06□□□□□ -1.76
SCN1A-215ENST00000637285 ELOA3Q8NG57 546 aa4.06□□□□□ -1.76
SCN1A-215ENST00000637285 GJD4Q96KN9 370 aaPredicted RBP4.06□□□□□ -1.76
SCN1A-215ENST00000637285 NACC1Q96RE7 527 aa4.06□□□□□ -1.76
SCN1A-215ENST00000637285 KDM4CQ9H3R0 1056 aa4.06□□□□□ -1.76
SCN1A-215ENST00000637285 ETNK1Q9HBU6 452 aa4.06□□□□□ -1.76
SCN1A-215ENST00000637285 GJA3Q9Y6H8 435 aa4.06□□□□□ -1.76
SCN1A-215ENST00000637285 M0R082 166 aa4.05□□□□□ -1.76
SCN1A-215ENST00000637285 TMEM259Q4ZIN3 620 aa4.05□□□□□ -1.76
SCN1A-215ENST00000637285 C1orf216Q8TAB5 229 aa4.05□□□□□ -1.76
SCN1A-215ENST00000637285 ZNF417Q8TAU3 575 aa4.05□□□□□ -1.76
SCN1A-215ENST00000637285 ZNF587Q96SQ5 575 aaPredicted RBP4.05□□□□□ -1.76
SCN1A-215ENST00000637285 NIFKQ9BYG3 293 aaKnown RBP4.05□□□□□ -1.76
SCN1A-215ENST00000637285 TATP17735 454 aaPredicted RBP4.04□□□□□ -1.76
SCN1A-215ENST00000637285 NBPF1Q3BBV0 1214 aa4.04□□□□□ -1.76
SCN1A-215ENST00000637285 C8orf86Q6ZUL3 223 aa4.04□□□□□ -1.76
SCN1A-215ENST00000637285 SYT9Q86SS6 491 aa4.04□□□□□ -1.76
SCN1A-215ENST00000637285 STRN4Q9NRL3 753 aa4.04□□□□□ -1.76
SCN1A-215ENST00000637285 MARK1Q9P0L2 795 aa4.04□□□□□ -1.76
SCN1A-215ENST00000637285 CEP126Q9P2H0 1117 aa4.04□□□□□ -1.76
SCN1A-215ENST00000637285 FAM157BP0CG42 384 aa4.03□□□□□ -1.76
SCN1A-215ENST00000637285 USP4Q13107 963 aa4.03□□□□□ -1.76
SCN1A-215ENST00000637285 TSGA10IPQ3SY00 556 aa4.03□□□□□ -1.76
SCN1A-215ENST00000637285 DOLKQ9UPQ8 538 aa4.03□□□□□ -1.76
SCN1A-215ENST00000637285 COBLO75128 1261 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 ALBP02768 609 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 H2AFB1P0C5Y9 115 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 H2AFB2P0C5Z0 115 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 COL9A3Q14050 684 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-215ENST00000637285 OXLD1Q5BKU9 147 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 TRAPPC3LQ5T215 181 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 MCTP1Q6DN14 999 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 BICDL1Q6ZP65 573 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 TP53INP1Q96A56 240 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 PCMTD1Q96MG8 357 aaPredicted RBP4.02□□□□□ -1.77
SCN1A-215ENST00000637285 ZIC5Q96T25 663 aa4.02□□□□□ -1.77
SCN1A-215ENST00000637285 C9orf172C9J069 976 aa4.01□□□□□ -1.77
SCN1A-215ENST00000637285 INHAP05111 366 aa4.01□□□□□ -1.77
SCN1A-215ENST00000637285 GDF10P55107 478 aa4.01□□□□□ -1.77
SCN1A-215ENST00000637285 MBTPS1Q14703 1052 aa4.01□□□□□ -1.77
SCN1A-215ENST00000637285 MICALL1Q8N3F8 863 aa4.01□□□□□ -1.77
SCN1A-215ENST00000637285 CABP1Q9NZU7 370 aa4.01□□□□□ -1.77
SCN1A-215ENST00000637285 SERTAD1Q9UHV2 236 aa4.01□□□□□ -1.77
SCN1A-215ENST00000637285 STARD13Q9Y3M8 1113 aa4.01□□□□□ -1.77
SCN1A-215ENST00000637285 PARP3Q9Y6F1 533 aa4.01□□□□□ -1.77
SCN1A-215ENST00000637285 SCNN1DP51172 638 aa4□□□□□ -1.77
SCN1A-215ENST00000637285 SMTNP53814 917 aa4□□□□□ -1.77
SCN1A-215ENST00000637285 LAMC2Q13753 1193 aa4□□□□□ -1.77
SCN1A-215ENST00000637285 ADGRE1Q14246 886 aa4□□□□□ -1.77
SCN1A-215ENST00000637285 TXNRD3Q86VQ6 643 aa4□□□□□ -1.77
SCN1A-215ENST00000637285 ADARB2-AS1A8MUL3 147 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 EFSO43281 561 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 PAX4O43316 350 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 SIN3BO75182 1162 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 NID1P14543 1247 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 ELNP15502 786 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 SELPP16109 830 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 SLFNL1Q499Z3 407 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 SAMD5Q5TGI4 173 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 SHISA2Q6UWI4 295 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 LRRC69Q6ZNQ3 347 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 SIRT1Q96EB6 747 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 SLC30A3Q99726 388 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 MDFIQ99750 246 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 PRDM6Q9NQX0 595 aa3.99□□□□□ -1.77
SCN1A-215ENST00000637285 ZDHHC3Q9NYG2 299 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms