RNA–Protein interactions for RNA: ENST00000636957.1

CHRNA7-222, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5

Gene CHRNA7, Length 622 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-222	ENST00000636957	SLC4A9	Q96Q91	983 aa		11.79	□□□□□ -0.52
CHRNA7-222	ENST00000636957	IFT57	Q9NWB7	429 aa		11.79	□□□□□ -0.52
CHRNA7-222	ENST00000636957	TSPYL4	Q9UJ04	414 aa		11.79	□□□□□ -0.52
CHRNA7-222	ENST00000636957	SALL2	Q9Y467	1007 aa	Predicted RBP	11.79	□□□□□ -0.52
CHRNA7-222	ENST00000636957	C4A	P0C0L4	1744 aa		11.79	□□□□□ -0.52
CHRNA7-222	ENST00000636957	IL16	Q14005	1332 aa		11.79	□□□□□ -0.52
CHRNA7-222	ENST00000636957	CASZ1	Q86V15	1759 aa		11.78	□□□□□ -0.52
CHRNA7-222	ENST00000636957	CHL1	O00533	1208 aa		11.78	□□□□□ -0.52
CHRNA7-222	ENST00000636957	KCNQ4	P56696	695 aa		11.78	□□□□□ -0.52
CHRNA7-222	ENST00000636957	GNAI1	P63096	354 aa		11.78	□□□□□ -0.52
CHRNA7-222	ENST00000636957	WDR63	Q8IWG1	891 aa		11.78	□□□□□ -0.52
CHRNA7-222	ENST00000636957	MIS18A	Q9NYP9	233 aa		11.78	□□□□□ -0.52
CHRNA7-222	ENST00000636957	ZNF521	Q96K83	1311 aa		11.78	□□□□□ -0.52
CHRNA7-222	ENST00000636957	KCNQ3	O43525	872 aa		11.77	□□□□□ -0.53
CHRNA7-222	ENST00000636957	ZNF853	P0CG23	659 aa		11.77	□□□□□ -0.53
CHRNA7-222	ENST00000636957	ITPK1	Q13572	414 aa		11.77	□□□□□ -0.53
CHRNA7-222	ENST00000636957	LAS1L	Q9Y4W2	734 aa	Known RBP	11.77	□□□□□ -0.53
CHRNA7-222	ENST00000636957	SPDYE2B	A6NHP3	402 aa		11.76	□□□□□ -0.53
CHRNA7-222	ENST00000636957	SPDYE6	P0CI01	402 aa		11.76	□□□□□ -0.53
CHRNA7-222	ENST00000636957	EIF4A1	P60842	406 aa	Known RBP	11.76	□□□□□ -0.53
CHRNA7-222	ENST00000636957	SPDYE2	Q495Y8	402 aa		11.76	□□□□□ -0.53
CHRNA7-222	ENST00000636957	NBPF14	Q5TI25	921 aa		11.76	□□□□□ -0.53
CHRNA7-222	ENST00000636957	LINC00116	Q8NCU8	138 aa		11.76	□□□□□ -0.53
CHRNA7-222	ENST00000636957	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.76	□□□□□ -0.53
CHRNA7-222	ENST00000636957	DNAJC10	Q8IXB1	793 aa		11.75	□□□□□ -0.53
CHRNA7-222	ENST00000636957	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.75	□□□□□ -0.53
CHRNA7-222	ENST00000636957	MBIP	Q9NS73	344 aa		11.75	□□□□□ -0.53
CHRNA7-222	ENST00000636957	STK32B	Q9NY57	414 aa		11.75	□□□□□ -0.53
CHRNA7-222	ENST00000636957	CNTNAP4	Q9C0A0	1308 aa		11.75	□□□□□ -0.53
CHRNA7-222	ENST00000636957	SNRPA1	P09661	255 aa	Known RBP	11.74	□□□□□ -0.53
CHRNA7-222	ENST00000636957	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
CHRNA7-222	ENST00000636957	SLC15A2	Q16348	729 aa		11.74	□□□□□ -0.53
CHRNA7-222	ENST00000636957	ZNF827	Q17R98	1081 aa		11.74	□□□□□ -0.53
CHRNA7-222	ENST00000636957	RC3H1	Q5TC82	1133 aa	Known RBP	11.74	□□□□□ -0.53
CHRNA7-222	ENST00000636957	GIGYF1	O75420	1035 aa	Predicted RBP	11.73	□□□□□ -0.53
CHRNA7-222	ENST00000636957	STARD3NL	O95772	234 aa		11.73	□□□□□ -0.53
CHRNA7-222	ENST00000636957	CYP19A1	P11511	503 aa	Predicted RBP	11.73	□□□□□ -0.53
CHRNA7-222	ENST00000636957	COL24A1	Q17RW2	1714 aa		11.73	□□□□□ -0.53
CHRNA7-222	ENST00000636957	BCOR	Q6W2J9	1755 aa		11.73	□□□□□ -0.53
CHRNA7-222	ENST00000636957	AK7	Q96M32	723 aa		11.73	□□□□□ -0.53
CHRNA7-222	ENST00000636957	CLEC11A	Q9Y240	323 aa		11.73	□□□□□ -0.53
CHRNA7-222	ENST00000636957	SCN7A	Q01118	1682 aa		11.72	□□□□□ -0.53
CHRNA7-222	ENST00000636957	FANCI	Q9NVI1	1328 aa		11.72	□□□□□ -0.53
CHRNA7-222	ENST00000636957	HOXB7	P09629	217 aa		11.72	□□□□□ -0.53
CHRNA7-222	ENST00000636957	CRKL	P46109	303 aa	Known RBP	11.72	□□□□□ -0.53
CHRNA7-222	ENST00000636957	GOLGA2	Q08379	1002 aa		11.72	□□□□□ -0.53
CHRNA7-222	ENST00000636957	TSR2	Q969E8	191 aa	Known RBP	11.72	□□□□□ -0.53
CHRNA7-222	ENST00000636957	MYH16	Q9H6N6	1097 aa		11.72	□□□□□ -0.53
CHRNA7-222	ENST00000636957	CCDC87	Q9NVE4	849 aa		11.72	□□□□□ -0.53
CHRNA7-222	ENST00000636957	TFCP2L1	Q9NZI6	479 aa		11.72	□□□□□ -0.53
CHRNA7-222	ENST00000636957	ZBED9	Q6R2W3	1325 aa		11.71	□□□□□ -0.53
CHRNA7-222	ENST00000636957	PRAMEF22	A3QJZ6	481 aa		11.71	□□□□□ -0.53
CHRNA7-222	ENST00000636957	GNPAT	O15228	680 aa		11.71	□□□□□ -0.53
CHRNA7-222	ENST00000636957	R3HDM1	Q15032	1099 aa	Known RBP	11.71	□□□□□ -0.53
CHRNA7-222	ENST00000636957	USP16	Q9Y5T5	823 aa		11.71	□□□□□ -0.53
CHRNA7-222	ENST00000636957	NUP98	P52948	1817 aa		11.71	□□□□□ -0.54
CHRNA7-222	ENST00000636957	SOS1	Q07889	1333 aa	Predicted RBP	11.7	□□□□□ -0.54
CHRNA7-222	ENST00000636957		E9PSI1	815 aa		11.7	□□□□□ -0.54
CHRNA7-222	ENST00000636957	PRKAR2A	P13861	404 aa	Known RBP	11.7	□□□□□ -0.54
CHRNA7-222	ENST00000636957	SSFA2	P28290	1259 aa		11.7	□□□□□ -0.54
CHRNA7-222	ENST00000636957	KRT24	Q2M2I5	525 aa		11.7	□□□□□ -0.54
CHRNA7-222	ENST00000636957	INTS5	Q6P9B9	1019 aa	Known RBP	11.7	□□□□□ -0.54
CHRNA7-222	ENST00000636957	FLAD1	Q8NFF5	587 aa		11.7	□□□□□ -0.54
CHRNA7-222	ENST00000636957	ZBTB1	Q9Y2K1	713 aa		11.7	□□□□□ -0.54
CHRNA7-222	ENST00000636957	RTCB	Q9Y3I0	505 aa	Known RBP	11.7	□□□□□ -0.54
CHRNA7-222	ENST00000636957	ANKRD36C	Q5JPF3	1778 aa		11.69	□□□□□ -0.54
CHRNA7-222	ENST00000636957	ERBB4	Q15303	1308 aa		11.69	□□□□□ -0.54
CHRNA7-222	ENST00000636957	PNPLA7	Q6ZV29	1317 aa		11.69	□□□□□ -0.54
CHRNA7-222	ENST00000636957	PSD	A5PKW4	1024 aa	Predicted RBP	11.69	□□□□□ -0.54
CHRNA7-222	ENST00000636957	RPS6KA4	O75676	772 aa		11.69	□□□□□ -0.54
CHRNA7-222	ENST00000636957	ATXN8OS	P0DMR3	200 aa		11.69	□□□□□ -0.54
CHRNA7-222	ENST00000636957	EVX2	Q03828	476 aa		11.69	□□□□□ -0.54
CHRNA7-222	ENST00000636957	DUSP27	Q5VZP5	1158 aa		11.69	□□□□□ -0.54
CHRNA7-222	ENST00000636957	COL15A1	P39059	1388 aa		11.68	□□□□□ -0.54
CHRNA7-222	ENST00000636957	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.68	□□□□□ -0.54
CHRNA7-222	ENST00000636957	A1BG	P04217	495 aa		11.68	□□□□□ -0.54
CHRNA7-222	ENST00000636957	IL6ST	P40189	918 aa	Predicted RBP	11.68	□□□□□ -0.54
CHRNA7-222	ENST00000636957	SLFN5	Q08AF3	891 aa		11.68	□□□□□ -0.54
CHRNA7-222	ENST00000636957	AMIGO3	Q86WK7	504 aa		11.68	□□□□□ -0.54
CHRNA7-222	ENST00000636957	C8orf58	Q8NAV2	365 aa		11.68	□□□□□ -0.54
CHRNA7-222	ENST00000636957	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.68	□□□□□ -0.54
CHRNA7-222	ENST00000636957	CHMP4A	Q9BY43	222 aa		11.68	□□□□□ -0.54
CHRNA7-222	ENST00000636957	ARFGEF2	Q9Y6D5	1785 aa		11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	SRCAP	Q6ZRS2	3230 aa		11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	PHF14	O94880	888 aa		11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	CANX	P27824	592 aa	Known RBP	11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	EIF5	P55010	431 aa	Known RBP	11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	EXOSC9	Q06265	439 aa	Known RBP	11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	TWISTNB	Q3B726	338 aa	Predicted RBP	11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	HDGFL1	Q5TGJ6	251 aa		11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	TRMT2A	Q8IZ69	625 aa	Known RBP	11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	CDCA7L	Q96GN5	454 aa		11.67	□□□□□ -0.54
CHRNA7-222	ENST00000636957	NBPF26	B4DH59	902 aa		11.66	□□□□□ -0.54
CHRNA7-222	ENST00000636957	ELL2	O00472	640 aa	Predicted RBP	11.66	□□□□□ -0.54
CHRNA7-222	ENST00000636957	EIF2S2	P20042	333 aa	Known RBP	11.66	□□□□□ -0.54
CHRNA7-222	ENST00000636957	TRAPPC3L	Q5T215	181 aa		11.66	□□□□□ -0.54
CHRNA7-222	ENST00000636957	NBPF10	Q6P3W6	841 aa	Known RBP	11.66	□□□□□ -0.54
CHRNA7-222	ENST00000636957	NPM2	Q86SE8	214 aa	Known RBP	11.66	□□□□□ -0.54
CHRNA7-222	ENST00000636957	COL23A1	Q86Y22	540 aa	Predicted RBP	11.66	□□□□□ -0.54
CHRNA7-222	ENST00000636957	NBPF15	Q8N660	670 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms