RNA–Protein interactions for RNA: ENST00000636422.1

ARID1A-213, Transcript of AT-rich interaction domain 1A, humanhuman

TSL 5

Gene ARID1A, Length 1,324 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-213ENST00000636422 NUDCQ9Y266 331 aa17.44■□□□□ 0.38
ARID1A-213ENST00000636422 RTCBQ9Y3I0 505 aaKnown RBP17.44■□□□□ 0.38
ARID1A-213ENST00000636422 SLC39A6Q13433 755 aa17.43■□□□□ 0.38
ARID1A-213ENST00000636422 INTS5Q6P9B9 1019 aaKnown RBP17.43■□□□□ 0.38
ARID1A-213ENST00000636422 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
ARID1A-213ENST00000636422 C10orf71Q711Q0 1435 aa17.43■□□□□ 0.38
ARID1A-213ENST00000636422 SOS1Q07889 1333 aaPredicted RBP17.42■□□□□ 0.38
ARID1A-213ENST00000636422 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
ARID1A-213ENST00000636422 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
ARID1A-213ENST00000636422 CD2APQ9Y5K6 639 aa17.42■□□□□ 0.38
ARID1A-213ENST00000636422 DNAJC10Q8IXB1 793 aa17.41■□□□□ 0.38
ARID1A-213ENST00000636422 ARHGEF1Q92888 912 aaKnown RBP17.41■□□□□ 0.38
ARID1A-213ENST00000636422 CHD4Q14839 1912 aa17.41■□□□□ 0.38
ARID1A-213ENST00000636422 USP42Q9H9J4 1324 aaKnown RBP17.4■□□□□ 0.38
ARID1A-213ENST00000636422 CYP19A1P11511 503 aaPredicted RBP17.4■□□□□ 0.38
ARID1A-213ENST00000636422 GYS1P13807 737 aa17.4■□□□□ 0.38
ARID1A-213ENST00000636422 HEG1Q9ULI3 1381 aa17.39■□□□□ 0.37
ARID1A-213ENST00000636422 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
ARID1A-213ENST00000636422 TRAPPC3LQ5T215 181 aa17.39■□□□□ 0.37
ARID1A-213ENST00000636422 CCDC87Q9NVE4 849 aa17.39■□□□□ 0.37
ARID1A-213ENST00000636422 PXDNLA1KZ92 1463 aa17.38■□□□□ 0.37
ARID1A-213ENST00000636422 DLG5Q8TDM6 1919 aa17.38■□□□□ 0.37
ARID1A-213ENST00000636422 RALBP1Q15311 655 aa17.38■□□□□ 0.37
ARID1A-213ENST00000636422 ZNF790Q6PG37 636 aa17.38■□□□□ 0.37
ARID1A-213ENST00000636422 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
ARID1A-213ENST00000636422 COL15A1P39059 1388 aa17.37■□□□□ 0.37
ARID1A-213ENST00000636422 MMP10P09238 476 aa17.37■□□□□ 0.37
ARID1A-213ENST00000636422 ZNF496Q96IT1 587 aaPredicted RBP17.37■□□□□ 0.37
ARID1A-213ENST00000636422 NRXN2Q9P2S2 1712 aa17.36■□□□□ 0.37
ARID1A-213ENST00000636422 YBX3P16989 372 aaKnown RBP eCLIP17.36■□□□□ 0.37
ARID1A-213ENST00000636422 YY1P25490 414 aa17.36■□□□□ 0.37
ARID1A-213ENST00000636422 TEFQ10587 303 aa17.36■□□□□ 0.37
ARID1A-213ENST00000636422 KLHL34Q8N239 644 aa17.36■□□□□ 0.37
ARID1A-213ENST00000636422 ZBTB1Q9Y2K1 713 aa17.36■□□□□ 0.37
ARID1A-213ENST00000636422 KDM3BQ7LBC6 1761 aa17.36■□□□□ 0.37
ARID1A-213ENST00000636422 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
ARID1A-213ENST00000636422 HTATSF1O43719 755 aaKnown RBP17.35■□□□□ 0.37
ARID1A-213ENST00000636422 FKBP8Q14318 412 aa17.35■□□□□ 0.37
ARID1A-213ENST00000636422 NLGN1Q8N2Q7 840 aa17.35■□□□□ 0.37
ARID1A-213ENST00000636422 MYBBP1AQ9BQG0 1328 aaKnown RBP17.34■□□□□ 0.37
ARID1A-213ENST00000636422 RFC4P35249 363 aa17.34■□□□□ 0.37
ARID1A-213ENST00000636422 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
ARID1A-213ENST00000636422 SRP68Q9UHB9 627 aaKnown RBP17.34■□□□□ 0.37
ARID1A-213ENST00000636422 TTC5Q8N0Z6 440 aa17.33■□□□□ 0.36
ARID1A-213ENST00000636422 LAMB4A4D0S4 1761 aa17.33■□□□□ 0.36
ARID1A-213ENST00000636422 BCORQ6W2J9 1755 aa17.32■□□□□ 0.36
ARID1A-213ENST00000636422 KCNQ3O43525 872 aa17.32■□□□□ 0.36
ARID1A-213ENST00000636422 DDR1Q08345 913 aa17.32■□□□□ 0.36
ARID1A-213ENST00000636422 MCM10Q7L590 875 aa17.32■□□□□ 0.36
ARID1A-213ENST00000636422 EIF5P55010 431 aaKnown RBP17.31■□□□□ 0.36
ARID1A-213ENST00000636422 GPR162Q16538 588 aa17.31■□□□□ 0.36
ARID1A-213ENST00000636422 FMNL2Q96PY5 1086 aa17.31■□□□□ 0.36
ARID1A-213ENST00000636422 BCL2L12Q9HB09 334 aa17.3■□□□□ 0.36
ARID1A-213ENST00000636422 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
ARID1A-213ENST00000636422 N4BP2Q86UW6 1770 aaPredicted RBP17.29■□□□□ 0.36
ARID1A-213ENST00000636422 BTBD11A6QL63 1104 aa17.29■□□□□ 0.36
ARID1A-213ENST00000636422 DCTN1Q14203 1278 aa17.29■□□□□ 0.36
ARID1A-213ENST00000636422 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
ARID1A-213ENST00000636422 AFDNP55196 1824 aaKnown RBP17.28■□□□□ 0.36
ARID1A-213ENST00000636422 ADCY9O60503 1353 aa17.28■□□□□ 0.36
ARID1A-213ENST00000636422 POLRMTO00411 1230 aaKnown RBP17.28■□□□□ 0.36
ARID1A-213ENST00000636422 STARD3NLO95772 234 aa17.28■□□□□ 0.36
ARID1A-213ENST00000636422 TM4SF1P30408 202 aa17.28■□□□□ 0.36
ARID1A-213ENST00000636422 CHADLQ6NUI6 762 aa17.28■□□□□ 0.36
ARID1A-213ENST00000636422 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
ARID1A-213ENST00000636422 TEX13AQ9BXU3 409 aaPredicted RBP17.28■□□□□ 0.36
ARID1A-213ENST00000636422 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.36
ARID1A-213ENST00000636422 DLEC1Q9Y238 1755 aa17.27■□□□□ 0.35
ARID1A-213ENST00000636422 GRIN3BO60391 1043 aa17.26■□□□□ 0.35
ARID1A-213ENST00000636422 USPL1Q5W0Q7 1092 aa17.26■□□□□ 0.35
ARID1A-213ENST00000636422 ZNF784Q8NCA9 323 aaPredicted RBP17.26■□□□□ 0.35
ARID1A-213ENST00000636422 IL6STP40189 918 aaPredicted RBP17.25■□□□□ 0.35
ARID1A-213ENST00000636422 TGFB2P61812 414 aa17.25■□□□□ 0.35
ARID1A-213ENST00000636422 PARP3Q9Y6F1 533 aa17.25■□□□□ 0.35
ARID1A-213ENST00000636422 ARFGEF1Q9Y6D6 1849 aa17.25■□□□□ 0.35
ARID1A-213ENST00000636422 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
ARID1A-213ENST00000636422 HAX1O00165 279 aa17.24■□□□□ 0.35
ARID1A-213ENST00000636422 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
ARID1A-213ENST00000636422 NFIXQ14938 502 aa17.24■□□□□ 0.35
ARID1A-213ENST00000636422 ZPR1O75312 459 aa17.23■□□□□ 0.35
ARID1A-213ENST00000636422 SNRPA1P09661 255 aaKnown RBP17.23■□□□□ 0.35
ARID1A-213ENST00000636422 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
ARID1A-213ENST00000636422 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
ARID1A-213ENST00000636422 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
ARID1A-213ENST00000636422 MAPK8IP3Q9UPT6 1336 aa17.23■□□□□ 0.35
ARID1A-213ENST00000636422 A1BGP04217 495 aa17.22■□□□□ 0.35
ARID1A-213ENST00000636422 KCNA3P22001 575 aa17.22■□□□□ 0.35
ARID1A-213ENST00000636422 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
ARID1A-213ENST00000636422 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
ARID1A-213ENST00000636422 USP16Q9Y5T5 823 aa17.22■□□□□ 0.35
ARID1A-213ENST00000636422 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
ARID1A-213ENST00000636422 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
ARID1A-213ENST00000636422 A0A087WZG4 1122 aa17.21■□□□□ 0.35
ARID1A-213ENST00000636422 NEFMP07197 916 aa17.21■□□□□ 0.35
ARID1A-213ENST00000636422 DPEP1P16444 411 aa17.21■□□□□ 0.35
ARID1A-213ENST00000636422 CAMTA2O94983 1202 aa17.21■□□□□ 0.34
ARID1A-213ENST00000636422 PNISRQ8TF01 805 aaKnown RBP17.21■□□□□ 0.34
ARID1A-213ENST00000636422 COL11A2P13942 1736 aaPredicted RBP17.2■□□□□ 0.34
ARID1A-213ENST00000636422 NBPF26B4DH59 902 aa17.2■□□□□ 0.34
ARID1A-213ENST00000636422 RGL2O15211 777 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms