RNA–Protein interactions for RNA: ENST00000636350.1

CACNB4-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 7,654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-222	ENST00000636350	TNNT3	P45378	269 aa	Predicted RBP	3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	PPP2R5B	Q15173	497 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	KANK3	Q6NY19	840 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	FMNL3	Q8IVF7	1028 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	C3orf20	Q8ND61	904 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	COG3	Q96JB2	828 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	LIMCH1	Q9UPQ0	1083 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	UNC13A	Q9UPW8	1703 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	ERBB4	Q15303	1308 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	RCAN1	P53805	252 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	TRDN	Q13061	729 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	NOLC1	Q14978	699 aa	Known RBP eCLIP	3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	BRD3	Q15059	726 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	NAA16	Q6N069	864 aa	Predicted RBP	3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	USP42	Q9H9J4	1324 aa	Known RBP	3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350		A0A1W2PQ27	194 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350		A0A1W2PQ64	194 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350		A0A1W2PQD8	194 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	GNAI2	P04899	355 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	TMPO	P42166	694 aa	Known RBP	3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	SLMAP	Q14BN4	828 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	STX1A	Q16623	288 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	CCDC38	Q502W7	563 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	POTED	Q86YR6	584 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	CALR3	Q96L12	384 aa	Known RBP	3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	NUP62CL	Q9H1M0	184 aa		3.89	□□□□□ -1.79
CACNB4-222	ENST00000636350	GOLIM4	O00461	696 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	KIF1C	O43896	1103 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	GLRX3	O76003	335 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	MPHOSPH8	Q99549	860 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	DNAI1	Q9UI46	699 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	CTNNA3	Q9UI47	895 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	NPAT	Q14207	1427 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	HNRNPM	P52272	730 aa	Known RBP eCLIP	3.88	□□□□□ -1.79	9e-6	■■■■□ 22.2
CACNB4-222	ENST00000636350	CCDC155	Q8N6L0	562 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	KIF18A	Q8NI77	898 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	PBRM1	Q86U86	1689 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	USP31	Q70CQ4	1352 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	EXOSC9	Q06265	439 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	CCDC184	Q52MB2	194 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	HSP90B2P	Q58FF3	399 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	ARMC9	Q7Z3E5	817 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	KCNB2	Q92953	911 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	CCDC47	Q96A33	483 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	R3HCC1	Q9Y3T6	440 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	CYP46A1	Q9Y6A2	500 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	CLTCL1	P53675	1640 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	MAP3K5	Q99683	1374 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	NLRP1	Q9C000	1473 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	ANKAR	Q7Z5J8	1434 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	SLU7	O95391	586 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	DDX58	O95786	925 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	VPS53	Q5VIR6	699 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	CEP112	Q8N8E3	955 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	CLSTN2	Q9H4D0	955 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350		U3KPZ7	1027 aa	Predicted RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	CTIF	O43310	598 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	ZSCAN22	P10073	491 aa	Predicted RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	TWISTNB	Q3B726	338 aa	Predicted RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	TMCO3	Q6UWJ1	677 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	LEKR1	Q6ZMV7	388 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	CFAP61	Q8NHU2	1237 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	P3H4	Q92791	437 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	SMARCE1	Q969G3	411 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	LRRCC1	Q9C099	1032 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	KDM5A	P29375	1690 aa	Known RBP	3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	RIPK4	P57078	832 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	FBLN2	P98095	1184 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	MYO6	Q9UM54	1294 aa		3.88	□□□□□ -1.79
CACNB4-222	ENST00000636350	NEXN	Q0ZGT2	675 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	DCTN1	Q14203	1278 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	PPP4R3B	Q5MIZ7	849 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	DDX12P	Q92771	950 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	GPR108	Q9NPR9	543 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	MROH1	Q8NDA8	1641 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	TECPR2	O15040	1411 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	PDE4C	Q08493	712 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	ZSCAN25	Q6NSZ9	544 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	ARHGAP27	Q6ZUM4	889 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	ZNF771	Q7L3S4	317 aa	Predicted RBP	3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	NOC3L	Q8WTT2	800 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	USP26	Q9BXU7	913 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	PHLPP2	Q6ZVD8	1323 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	GORAB	Q5T7V8	394 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	GBP6	Q6ZN66	633 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	TEX2	Q8IWB9	1127 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	TRIML1	Q8N9V2	468 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	CDCA7L	Q96GN5	454 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	LMBRD1	Q9NUN5	540 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	RBM27	Q9P2N5	1060 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	ATP8B2	P98198	1209 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	CKAP4	Q07065	602 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	CCAR1	Q8IX12	1150 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	CTAGE1	Q96RT6	745 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	RRAGD	Q9NQL2	400 aa	Predicted RBP	3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	BECN2	A8MW95	431 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	BRAP	Q7Z569	592 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	IQUB	Q8NA54	791 aa		3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	LUC7L	Q9NQ29	371 aa	Known RBP	3.87	□□□□□ -1.79
CACNB4-222	ENST00000636350	TAOK2	Q9UL54	1235 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms