RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 LRP2BPQ9P2M1 347 aa11.41□□□□□ -0.58
SPTAN1-228ENST00000635853 PAIP2Q9BPZ3 127 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 ARFGAP3Q9NP61 516 aa11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 ZMYM3Q14202 1370 aa11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 MTHFSP49914 203 aa11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 IRX5P78411 483 aaPredicted RBP11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 EPB41L2O43491 1005 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 CCDC150Q8NCX0 1101 aa11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 SPATA32Q96LK8 384 aa11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 INCENPQ9NQS7 918 aa11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 SEC63Q9UGP8 760 aaKnown RBP11.4□□□□□ -0.58
SPTAN1-228ENST00000635853 SYNJ1O43426 1573 aa11.4□□□□□ -0.59
SPTAN1-228ENST00000635853 NAIPQ13075 1403 aa11.4□□□□□ -0.59
SPTAN1-228ENST00000635853 DHX37Q8IY37 1157 aaKnown RBP11.4□□□□□ -0.59
SPTAN1-228ENST00000635853 PTPN23Q9H3S7 1636 aa11.4□□□□□ -0.59
SPTAN1-228ENST00000635853 PABPN1LA6NDY0 278 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 GOLIM4O00461 696 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 FAM177A1Q8N128 213 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 IBTKQ9P2D0 1353 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 PPP1R12BO60237 982 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 GNAI2P04899 355 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 POLR3DP05423 398 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 RARSP54136 660 aaKnown RBP11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 CAMK4Q16566 473 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 NBPF11Q86T75 865 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 GAS2L3Q86XJ1 694 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 TCP11L2Q8N4U5 519 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 CDKL5O76039 1030 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 CAVIN2O95810 425 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 CETN2P41208 172 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 IQCEQ6IPM2 695 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 CCDC186Q7Z3E2 898 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 CRACR2AQ9BSW2 395 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 MAP4K4O95819 1239 aaPredicted RBP11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 DYDC1Q8WWB3 177 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 PSMD1Q99460 953 aa11.39□□□□□ -0.59
SPTAN1-228ENST00000635853 ATP6V1AP38606 617 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 ZNF530Q6P9A1 599 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 SMARCC1Q92922 1105 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 ZSCAN31Q96LW9 406 aaPredicted RBP11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 UPF3BQ9BZI7 483 aaKnown RBP11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 TSC1Q92574 1164 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 ANTXR1Q9H6X2 564 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 TAF4BQ92750 862 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 ZNF652Q9Y2D9 606 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 STAMBPO95630 424 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 CUL5Q93034 780 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 ZNF287Q9HBT7 754 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 ANKIB1Q9P2G1 1089 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 GOLGA6L9A6NEM1 432 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 EXOSC9Q06265 439 aaKnown RBP11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 HDGFL1Q5TGJ6 251 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 CYP46A1Q9Y6A2 500 aa11.38□□□□□ -0.59
SPTAN1-228ENST00000635853 ANKRD1Q15327 319 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 TMEM132EQ6IEE7 984 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 THEMISQ8N1K5 641 aaPredicted RBP11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 CPSF2Q9P2I0 782 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 ME1P48163 572 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 GRM1Q13255 1194 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.37□□□□□ -0.592e-7■□□□□ 9.2
SPTAN1-228ENST00000635853 ERBINQ96RT1 1412 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 PRXQ9BXM0 1461 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 FERMT2Q96AC1 680 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 EHMT1Q9H9B1 1298 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 DDX19AQ9NUU7 478 aaKnown RBP11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 KIAA1107Q9UPP5 1409 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 HDAC1Q13547 482 aaPredicted RBP11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 PTGS1P23219 599 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 FAM200AQ8TCP9 573 aa11.37□□□□□ -0.59
SPTAN1-228ENST00000635853 ANO10Q9NW15 660 aa11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 ZSCAN26Q16670 478 aa11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 RNF187Q5TA31 235 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 EHBP1L1Q8N3D4 1523 aa11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 LUZP1Q86V48 1076 aa11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 C16orf71Q8IYS4 520 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 VPS18Q9P253 973 aa11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 CTAGE5O15320 804 aa11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 ARHGAP29Q52LW3 1261 aa11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 USP48Q86UV5 1035 aa11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 WASF1Q92558 559 aa11.36□□□□□ -0.59
SPTAN1-228ENST00000635853 SKILP12757 684 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 CCDC96Q2M329 555 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 RPAINQ86UA6 219 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 RPGRQ92834 1020 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 CAVIN4Q5BKX8 364 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 C1orf115Q9H7X2 142 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 MKRN1Q9UHC7 482 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 STARD3NLO95772 234 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 LARP1BQ659C4 914 aaKnown RBP11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 CCDC148Q8NFR7 591 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 AIDAQ96BJ3 306 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 ATP2B3Q16720 1220 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 UBA5Q9GZZ9 404 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 PPP6R1Q9UPN7 881 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 BTBD11A6QL63 1104 aa11.35□□□□□ -0.59
SPTAN1-228ENST00000635853 TWISTNBQ3B726 338 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms