RNA–Protein interactions for RNA: ENST00000635843.1

EFHC1-208, Transcript of EF-hand domain containing 1, human

TSL 4

Gene EFHC1, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-208	ENST00000635843	CEMIP	Q8WUJ3	1361 aa		14.05	□□□□□ -0.16
EFHC1-208	ENST00000635843	A1BG	P04217	495 aa		14.04	□□□□□ -0.16
EFHC1-208	ENST00000635843	TMPO	P42166	694 aa	Known RBP	14.04	□□□□□ -0.16
EFHC1-208	ENST00000635843	USPL1	Q5W0Q7	1092 aa		14.04	□□□□□ -0.16
EFHC1-208	ENST00000635843	WWC3	Q9ULE0	1092 aa		14.04	□□□□□ -0.16
EFHC1-208	ENST00000635843	CD2AP	Q9Y5K6	639 aa		14.04	□□□□□ -0.16
EFHC1-208	ENST00000635843	USP16	Q9Y5T5	823 aa		14.04	□□□□□ -0.16
EFHC1-208	ENST00000635843	HEG1	Q9ULI3	1381 aa		14.04	□□□□□ -0.16
EFHC1-208	ENST00000635843	FKBP8	Q14318	412 aa		14.03	□□□□□ -0.16
EFHC1-208	ENST00000635843	RUNDC1	Q96C34	613 aa		14.03	□□□□□ -0.16
EFHC1-208	ENST00000635843	MRC1	P22897	1456 aa		14.03	□□□□□ -0.16
EFHC1-208	ENST00000635843	ZNF831	Q5JPB2	1677 aa		14.02	□□□□□ -0.16
EFHC1-208	ENST00000635843	SOS1	Q07889	1333 aa	Predicted RBP	14.02	□□□□□ -0.17
EFHC1-208	ENST00000635843	PRAMEF22	A3QJZ6	481 aa		14.02	□□□□□ -0.17
EFHC1-208	ENST00000635843	ANP32C	O43423	234 aa		14.02	□□□□□ -0.17
EFHC1-208	ENST00000635843	SNRPA1	P09661	255 aa	Known RBP	14.02	□□□□□ -0.17
EFHC1-208	ENST00000635843	YY1	P25490	414 aa		14.02	□□□□□ -0.17
EFHC1-208	ENST00000635843	PNISR	Q8TF01	805 aa	Known RBP	14.02	□□□□□ -0.17
EFHC1-208	ENST00000635843	TBC1D2B	Q9UPU7	963 aa		14.02	□□□□□ -0.17
EFHC1-208	ENST00000635843	COL5A3	P25940	1745 aa	Predicted RBP	14.01	□□□□□ -0.17
EFHC1-208	ENST00000635843	ADAMTS7	Q9UKP4	1686 aa		14.01	□□□□□ -0.17
EFHC1-208	ENST00000635843	KCP	Q6ZWJ8	1503 aa		14.01	□□□□□ -0.17
EFHC1-208	ENST00000635843	USP42	Q9H9J4	1324 aa	Known RBP	14.01	□□□□□ -0.17
EFHC1-208	ENST00000635843	PIP4K2A	P48426	406 aa	Predicted RBP	14.01	□□□□□ -0.17
EFHC1-208	ENST00000635843	NARF	Q9UHQ1	456 aa		14.01	□□□□□ -0.17
EFHC1-208	ENST00000635843	LAS1L	Q9Y4W2	734 aa	Known RBP	14.01	□□□□□ -0.17
EFHC1-208	ENST00000635843		A0A087WZG4	1122 aa		14	□□□□□ -0.17
EFHC1-208	ENST00000635843	BICDL1	Q6ZP65	573 aa		14	□□□□□ -0.17
EFHC1-208	ENST00000635843	TJP1	Q07157	1748 aa		14	□□□□□ -0.17
EFHC1-208	ENST00000635843	DLG5	Q8TDM6	1919 aa		14	□□□□□ -0.17
EFHC1-208	ENST00000635843		A0A0G2JLW4	131 aa		13.99	□□□□□ -0.17
EFHC1-208	ENST00000635843	EIF5	P55010	431 aa	Known RBP	13.99	□□□□□ -0.17
EFHC1-208	ENST00000635843	LMOD3	Q0VAK6	560 aa		13.99	□□□□□ -0.17
EFHC1-208	ENST00000635843	NGEF	Q8N5V2	710 aa		13.99	□□□□□ -0.17
EFHC1-208	ENST00000635843	TSPYL4	Q9UJ04	414 aa		13.99	□□□□□ -0.17
EFHC1-208	ENST00000635843	COL24A1	Q17RW2	1714 aa		13.98	□□□□□ -0.17
EFHC1-208	ENST00000635843	COL15A1	P39059	1388 aa		13.98	□□□□□ -0.17
EFHC1-208	ENST00000635843	TM4SF1	P30408	202 aa		13.98	□□□□□ -0.17
EFHC1-208	ENST00000635843	CCDC184	Q52MB2	194 aa		13.98	□□□□□ -0.17
EFHC1-208	ENST00000635843	SIPA1L3	O60292	1781 aa	Predicted RBP	13.98	□□□□□ -0.17
EFHC1-208	ENST00000635843	SENP3-EIF4A1	A0A087X0R7	540 aa		13.97	□□□□□ -0.17
EFHC1-208	ENST00000635843	YBX3	P16989	372 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
EFHC1-208	ENST00000635843	IL6ST	P40189	918 aa	Predicted RBP	13.97	□□□□□ -0.17
EFHC1-208	ENST00000635843	NFIX	Q14938	502 aa		13.97	□□□□□ -0.17
EFHC1-208	ENST00000635843	APAF1	O14727	1248 aa		13.96	□□□□□ -0.17
EFHC1-208	ENST00000635843	GRIN3B	O60391	1043 aa		13.96	□□□□□ -0.17
EFHC1-208	ENST00000635843	EIF4A1	P60842	406 aa	Known RBP	13.96	□□□□□ -0.17
EFHC1-208	ENST00000635843	DDR1	Q08345	913 aa		13.96	□□□□□ -0.17
EFHC1-208	ENST00000635843	DZIP3	Q86Y13	1208 aa	Known RBP	13.96	□□□□□ -0.17
EFHC1-208	ENST00000635843	UBR2	Q8IWV8	1755 aa		13.96	□□□□□ -0.18
EFHC1-208	ENST00000635843	GIGYF1	O75420	1035 aa	Predicted RBP	13.95	□□□□□ -0.18
EFHC1-208	ENST00000635843	SERPINB2	P05120	415 aa		13.95	□□□□□ -0.18
EFHC1-208	ENST00000635843	EIF2S2	P20042	333 aa	Known RBP	13.95	□□□□□ -0.18
EFHC1-208	ENST00000635843	TGFB2	P61812	414 aa		13.95	□□□□□ -0.18
EFHC1-208	ENST00000635843	BCL2L12	Q9HB09	334 aa		13.95	□□□□□ -0.18
EFHC1-208	ENST00000635843	MRS2	Q9HD23	443 aa		13.95	□□□□□ -0.18
EFHC1-208	ENST00000635843	TRIM35	Q9UPQ4	493 aa		13.95	□□□□□ -0.18
EFHC1-208	ENST00000635843	NBPF26	B4DH59	902 aa		13.94	□□□□□ -0.18
EFHC1-208	ENST00000635843	POLRMT	O00411	1230 aa	Known RBP	13.94	□□□□□ -0.18
EFHC1-208	ENST00000635843	NPHP1	O15259	732 aa		13.94	□□□□□ -0.18
EFHC1-208	ENST00000635843	MYL6B	P14649	208 aa		13.94	□□□□□ -0.18
EFHC1-208	ENST00000635843	DPEP1	P16444	411 aa		13.94	□□□□□ -0.18
EFHC1-208	ENST00000635843	TBC1D9B	Q66K14	1250 aa		13.94	□□□□□ -0.18
EFHC1-208	ENST00000635843	NBPF10	Q6P3W6	841 aa	Known RBP	13.94	□□□□□ -0.18
EFHC1-208	ENST00000635843	NBPF15	Q8N660	670 aa		13.94	□□□□□ -0.18
EFHC1-208	ENST00000635843	NECTIN2	Q92692	538 aa		13.93	□□□□□ -0.18
EFHC1-208	ENST00000635843	SETDB2	Q96T68	719 aa		13.93	□□□□□ -0.18
EFHC1-208	ENST00000635843	BCS1L	Q9Y276	419 aa		13.93	□□□□□ -0.18
EFHC1-208	ENST00000635843	C4A	P0C0L4	1744 aa		13.93	□□□□□ -0.18
EFHC1-208	ENST00000635843	CCDC24	Q8N4L8	307 aa		13.92	□□□□□ -0.18
EFHC1-208	ENST00000635843	CIC	Q96RK0	1608 aa	Predicted RBP	13.92	□□□□□ -0.18
EFHC1-208	ENST00000635843	CHL1	O00533	1208 aa		13.91	□□□□□ -0.18
EFHC1-208	ENST00000635843	CAMTA2	O94983	1202 aa		13.91	□□□□□ -0.18
EFHC1-208	ENST00000635843	CHRNA5	P30532	468 aa		13.91	□□□□□ -0.18
EFHC1-208	ENST00000635843	ARHGAP27	Q6ZUM4	889 aa		13.91	□□□□□ -0.18
EFHC1-208	ENST00000635843	BABAM1	Q9NWV8	329 aa		13.91	□□□□□ -0.18
EFHC1-208	ENST00000635843	FAM177B	A6PVY3	158 aa		13.9	□□□□□ -0.18
EFHC1-208	ENST00000635843	PIM2	Q9P1W9	311 aa		13.9	□□□□□ -0.18
EFHC1-208	ENST00000635843	KRT24	Q2M2I5	525 aa		13.89	□□□□□ -0.19
EFHC1-208	ENST00000635843	ZNF652	Q9Y2D9	606 aa		13.89	□□□□□ -0.19
EFHC1-208	ENST00000635843	SALL2	Q9Y467	1007 aa	Predicted RBP	13.89	□□□□□ -0.19
EFHC1-208	ENST00000635843		H0YIN7	160 aa		13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	KCNA3	P22001	575 aa		13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	HLF	Q16534	295 aa		13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	DALRD3	Q5D0E6	543 aa	Known RBP	13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	CLEC4G	Q6UXB4	293 aa		13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	KIF6	Q6ZMV9	814 aa		13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	C2CD5	Q86YS7	1000 aa		13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	FAM9B	Q8IZU0	186 aa		13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.88	□□□□□ -0.19
EFHC1-208	ENST00000635843	ANXA1	P04083	346 aa		13.87	□□□□□ -0.19
EFHC1-208	ENST00000635843	GTF2E1	P29083	439 aa	Predicted RBP	13.87	□□□□□ -0.19
EFHC1-208	ENST00000635843	CALD1	Q05682	793 aa	Known RBP	13.87	□□□□□ -0.19
EFHC1-208	ENST00000635843	AIMP1	Q12904	312 aa	Known RBP	13.87	□□□□□ -0.19
EFHC1-208	ENST00000635843	TTLL7	Q6ZT98	887 aa		13.87	□□□□□ -0.19
EFHC1-208	ENST00000635843	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.87	□□□□□ -0.19
EFHC1-208	ENST00000635843	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
EFHC1-208	ENST00000635843	CFAP44	Q96MT7	982 aa		13.87	□□□□□ -0.19
EFHC1-208	ENST00000635843	ZBTB3	Q9H5J0	574 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms