RNA–Protein interactions for RNA: ENST00000635721.1

SSRP1-205, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-205ENST00000635721 FAM182BQ5T319 152 aa9.48□□□□□ -0.89
SSRP1-205ENST00000635721 ZNF530Q6P9A1 599 aaPredicted RBP9.48□□□□□ -0.89
SSRP1-205ENST00000635721 MPRIPQ6WCQ1 1025 aa9.48□□□□□ -0.89
SSRP1-205ENST00000635721 MCM10Q7L590 875 aa9.48□□□□□ -0.89
SSRP1-205ENST00000635721 IL17REQ8NFR9 667 aa9.48□□□□□ -0.89
SSRP1-205ENST00000635721 DDX54Q8TDD1 881 aaKnown RBP9.48□□□□□ -0.89
SSRP1-205ENST00000635721 TNPO1Q92973 898 aaKnown RBP9.48□□□□□ -0.89
SSRP1-205ENST00000635721 GCC1Q96CN9 775 aa9.48□□□□□ -0.89
SSRP1-205ENST00000635721 PANK2Q9BZ23 570 aa9.48□□□□□ -0.89
SSRP1-205ENST00000635721 CWC22Q9HCG8 908 aaKnown RBP9.48□□□□□ -0.89
SSRP1-205ENST00000635721 NOL7Q9UMY1 257 aaKnown RBP9.48□□□□□ -0.89
SSRP1-205ENST00000635721 THRAP3Q9Y2W1 955 aaKnown RBP9.48□□□□□ -0.89
SSRP1-205ENST00000635721 LRRC37A3O60309 1634 aa9.48□□□□□ -0.89
SSRP1-205ENST00000635721 THSD7AQ9UPZ6 1657 aa9.48□□□□□ -0.89
SSRP1-205ENST00000635721 SCN11AQ9UI33 1791 aa9.47□□□□□ -0.89
SSRP1-205ENST00000635721 EXOC5O00471 708 aa9.47□□□□□ -0.89
SSRP1-205ENST00000635721 PHKG2P15735 406 aa9.47□□□□□ -0.89
SSRP1-205ENST00000635721 NUCB2P80303 420 aa9.47□□□□□ -0.89
SSRP1-205ENST00000635721 ZNF772Q68DY9 489 aaPredicted RBP9.47□□□□□ -0.89
SSRP1-205ENST00000635721 ATF7IPQ6VMQ6 1270 aa9.47□□□□□ -0.89
SSRP1-205ENST00000635721 MARCH10Q8NA82 808 aaPredicted RBP9.47□□□□□ -0.89
SSRP1-205ENST00000635721 ITGB4P16144 1822 aa9.47□□□□□ -0.89
SSRP1-205ENST00000635721 TOGARAM1Q9Y4F4 1720 aa9.46□□□□□ -0.89
SSRP1-205ENST00000635721 ONECUT3O60422 494 aaPredicted RBP9.46□□□□□ -0.9
SSRP1-205ENST00000635721 AMOTQ4VCS5 1084 aa9.46□□□□□ -0.9
SSRP1-205ENST00000635721 AKAP4Q5JQC9 854 aa9.46□□□□□ -0.9
SSRP1-205ENST00000635721 SEPT12Q8IYM1 358 aa9.46□□□□□ -0.9
SSRP1-205ENST00000635721 GAS2L2Q8NHY3 880 aa9.46□□□□□ -0.9
SSRP1-205ENST00000635721 ANP32BQ92688 251 aaKnown RBP9.46□□□□□ -0.9
SSRP1-205ENST00000635721 KIF2CQ99661 725 aa9.46□□□□□ -0.9
SSRP1-205ENST00000635721 SPG7Q9UQ90 795 aa9.46□□□□□ -0.9
SSRP1-205ENST00000635721 ERBB4Q15303 1308 aa9.46□□□□□ -0.9
SSRP1-205ENST00000635721 A0A0G2JS52 829 aa9.45□□□□□ -0.9
SSRP1-205ENST00000635721 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
SSRP1-205ENST00000635721 DYNC1I1O14576 645 aa9.45□□□□□ -0.9
SSRP1-205ENST00000635721 RNMTO43148 476 aaKnown RBP9.45□□□□□ -0.9
SSRP1-205ENST00000635721 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
SSRP1-205ENST00000635721 HSP90AB1P08238 724 aaKnown RBP9.45□□□□□ -0.9
SSRP1-205ENST00000635721 RBM6P78332 1123 aaKnown RBP9.45□□□□□ -0.9
SSRP1-205ENST00000635721 DDB1Q16531 1140 aa9.45□□□□□ -0.9
SSRP1-205ENST00000635721 IFNL2Q8IZJ0 200 aa9.45□□□□□ -0.9
SSRP1-205ENST00000635721 VSIG10Q8N0Z9 540 aa9.45□□□□□ -0.9
SSRP1-205ENST00000635721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.45□□□□□ -0.91e-6■■■□□ 15.7
SSRP1-205ENST00000635721 MIS18AQ9NYP9 233 aa9.45□□□□□ -0.9
SSRP1-205ENST00000635721 KDM6AO15550 1401 aaPredicted RBP9.45□□□□□ -0.9
SSRP1-205ENST00000635721 SIPA1L3O60292 1781 aaPredicted RBP9.45□□□□□ -0.9
SSRP1-205ENST00000635721 SBF2Q86WG5 1849 aa9.45□□□□□ -0.9
SSRP1-205ENST00000635721 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
SSRP1-205ENST00000635721 RXRBP28702 533 aa9.44□□□□□ -0.9
SSRP1-205ENST00000635721 GAS2L3Q86XJ1 694 aa9.44□□□□□ -0.9
SSRP1-205ENST00000635721 MAP3K5Q99683 1374 aa9.44□□□□□ -0.9
SSRP1-205ENST00000635721 ADAMTS7Q9UKP4 1686 aa9.44□□□□□ -0.9
SSRP1-205ENST00000635721 TNS2Q63HR2 1409 aa9.43□□□□□ -0.9
SSRP1-205ENST00000635721 PCDH11XQ9BZA7 1347 aa9.43□□□□□ -0.9
SSRP1-205ENST00000635721 PCDH11YQ9BZA8 1340 aa9.43□□□□□ -0.9
SSRP1-205ENST00000635721 NKX1-1Q15270 411 aaPredicted RBP9.43□□□□□ -0.9
SSRP1-205ENST00000635721 RABEP1Q15276 862 aa9.43□□□□□ -0.9
SSRP1-205ENST00000635721 C1orf141Q5JVX7 400 aa9.43□□□□□ -0.9
SSRP1-205ENST00000635721 SMAP1Q8IYB5 467 aaPredicted RBP9.43□□□□□ -0.9
SSRP1-205ENST00000635721 IL17RAQ96F46 866 aa9.43□□□□□ -0.9
SSRP1-205ENST00000635721 ACSBG1Q96GR2 724 aa9.43□□□□□ -0.9
SSRP1-205ENST00000635721 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
SSRP1-205ENST00000635721 DOT1LQ8TEK3 1739 aa9.42□□□□□ -0.9
SSRP1-205ENST00000635721 EPB41L2O43491 1005 aaKnown RBP9.42□□□□□ -0.9
SSRP1-205ENST00000635721 KCNQ3O43525 872 aa9.42□□□□□ -0.9
SSRP1-205ENST00000635721 TRIM27P14373 513 aa9.42□□□□□ -0.9
SSRP1-205ENST00000635721 NASPP49321 788 aaPredicted RBP9.42□□□□□ -0.9
SSRP1-205ENST00000635721 UTP14CQ5TAP6 766 aaKnown RBP9.42□□□□□ -0.9
SSRP1-205ENST00000635721 KIAA1211Q6ZU35 1233 aa9.42□□□□□ -0.9
SSRP1-205ENST00000635721 PTF1AQ7RTS3 328 aa9.42□□□□□ -0.9
SSRP1-205ENST00000635721 CHD1LQ86WJ1 897 aa9.42□□□□□ -0.9
SSRP1-205ENST00000635721 FTSJ3Q8IY81 847 aaKnown RBP9.42□□□□□ -0.9
SSRP1-205ENST00000635721 RTF1Q92541 710 aaKnown RBP9.42□□□□□ -0.9
SSRP1-205ENST00000635721 RGS12O14924 1447 aa9.41□□□□□ -0.9
SSRP1-205ENST00000635721 KCNQ2O43526 872 aa9.41□□□□□ -0.9
SSRP1-205ENST00000635721 HTATSF1O43719 755 aaKnown RBP9.41□□□□□ -0.9
SSRP1-205ENST00000635721 NFATC2IPQ8NCF5 419 aa9.41□□□□□ -0.9
SSRP1-205ENST00000635721 CEMIPQ8WUJ3 1361 aa9.4□□□□□ -0.9
SSRP1-205ENST00000635721 BAG4O95429 457 aaKnown RBP9.4□□□□□ -0.9
SSRP1-205ENST00000635721 ZNF853P0CG23 659 aa9.4□□□□□ -0.9
SSRP1-205ENST00000635721 MSNP26038 577 aaKnown RBP9.4□□□□□ -0.9
SSRP1-205ENST00000635721 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
SSRP1-205ENST00000635721 MFAP1P55081 439 aaKnown RBP9.4□□□□□ -0.9
SSRP1-205ENST00000635721 SLC39A6Q13433 755 aa9.4□□□□□ -0.9
SSRP1-205ENST00000635721 TSR2Q969E8 191 aaKnown RBP9.4□□□□□ -0.9
SSRP1-205ENST00000635721 DCAF5Q96JK2 942 aa9.4□□□□□ -0.9
SSRP1-205ENST00000635721 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.91
SSRP1-205ENST00000635721 CABP4P57796 275 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 LMOD3Q0VAK6 560 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 TAF7Q15545 349 aaPredicted RBP9.39□□□□□ -0.91
SSRP1-205ENST00000635721 KRT24Q2M2I5 525 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 UVSSAQ2YD98 709 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 KRT27Q7Z3Y8 459 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 SLC52A2Q9HAB3 445 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 MBIPQ9NS73 344 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 PRDM4Q9UKN5 801 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 ZKSCAN5Q9Y2L8 839 aa9.39□□□□□ -0.91
SSRP1-205ENST00000635721 PLEKHG2Q9H7P9 1386 aa9.38□□□□□ -0.91
SSRP1-205ENST00000635721 CHL1O00533 1208 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms