RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 MDFIQ99750 246 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 KDM4CQ9H3R0 1056 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 ETNK1Q9HBU6 452 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 STRN4Q9NRL3 753 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 PCDHGC4Q9Y5F7 938 aa5.83□□□□□ -1.48
SMARCB1-208ENST00000634926 PLA2G4AP47712 749 aa5.82□□□□□ -1.48
SMARCB1-208ENST00000634926 BTBD11A6QL63 1104 aa5.81□□□□□ -1.48
SMARCB1-208ENST00000634926 ATXN7O15265 892 aaPredicted RBP5.81□□□□□ -1.48
SMARCB1-208ENST00000634926 NR1H3Q13133 447 aa5.81□□□□□ -1.48
SMARCB1-208ENST00000634926 ZNF295-AS1Q8N0V1 137 aa5.81□□□□□ -1.48
SMARCB1-208ENST00000634926 RHBDD1Q8TEB9 315 aa5.81□□□□□ -1.48
SMARCB1-208ENST00000634926 TRIM52Q96A61 297 aa5.81□□□□□ -1.48
SMARCB1-208ENST00000634926 FAM182BQ5T319 152 aa5.8□□□□□ -1.48
SMARCB1-208ENST00000634926 C8orf86Q6ZUL3 223 aa5.8□□□□□ -1.48
SMARCB1-208ENST00000634926 HYAL3O43820 417 aaPredicted RBP5.79□□□□□ -1.48
SMARCB1-208ENST00000634926 GRIK4Q16099 956 aa5.79□□□□□ -1.48
SMARCB1-208ENST00000634926 ZNF468Q5VIY5 522 aaPredicted RBP5.79□□□□□ -1.48
SMARCB1-208ENST00000634926 GOLGA2P5Q9HBQ8 144 aa5.79□□□□□ -1.48
SMARCB1-208ENST00000634926 STARD13Q9Y3M8 1113 aa5.79□□□□□ -1.48
SMARCB1-208ENST00000634926 A0A1W2PNR3 127 aa5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 KHNYNO15037 678 aaKnown RBP5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 SCNN1DP51172 638 aa5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 TLR1Q15399 786 aa5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 FIGNL1Q6PIW4 674 aa5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 TBC1D9Q6ZT07 1266 aa5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 NLRP8Q86W28 1048 aa5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 ESF1Q9H501 851 aaKnown RBP5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 CEP126Q9P2H0 1117 aa5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 USP3Q9Y6I4 520 aa5.78□□□□□ -1.48
SMARCB1-208ENST00000634926 NBPF11Q86T75 865 aa5.77□□□□□ -1.49
SMARCB1-208ENST00000634926 AVENQ9NQS1 362 aaPredicted RBP5.77□□□□□ -1.49
SMARCB1-208ENST00000634926 LRP8Q14114 963 aa5.76□□□□□ -1.49
SMARCB1-208ENST00000634926 PHTF2Q8N3S3 785 aa5.76□□□□□ -1.49
SMARCB1-208ENST00000634926 AIDAQ96BJ3 306 aa5.76□□□□□ -1.49
SMARCB1-208ENST00000634926 DDRGK1Q96HY6 314 aa5.76□□□□□ -1.49
SMARCB1-208ENST00000634926 ZIC5Q96T25 663 aa5.76□□□□□ -1.49
SMARCB1-208ENST00000634926 ELOA3CA0A087WX78 387 aaPredicted RBP5.75□□□□□ -1.49
SMARCB1-208ENST00000634926 ELOA3DA6NLF2 546 aaPredicted RBP5.75□□□□□ -1.49
SMARCB1-208ENST00000634926 EFSO43281 561 aa5.75□□□□□ -1.49
SMARCB1-208ENST00000634926 MYCP01106 439 aaPredicted RBP5.75□□□□□ -1.49
SMARCB1-208ENST00000634926 GTF2E1P29083 439 aaPredicted RBP5.75□□□□□ -1.49
SMARCB1-208ENST00000634926 MCCD1P59942 119 aaPredicted RBP5.75□□□□□ -1.49
SMARCB1-208ENST00000634926 ELOA3BQ3SY89 546 aa5.75□□□□□ -1.49
SMARCB1-208ENST00000634926 ESCO1Q5FWF5 840 aa5.75□□□□□ -1.49
SMARCB1-208ENST00000634926 ELOA3Q8NG57 546 aa5.75□□□□□ -1.49
SMARCB1-208ENST00000634926 M0R082 166 aa5.74□□□□□ -1.49
SMARCB1-208ENST00000634926 ALBP02768 609 aa5.74□□□□□ -1.49
SMARCB1-208ENST00000634926 SELPP16109 830 aa5.74□□□□□ -1.49
SMARCB1-208ENST00000634926 TMEM259Q4ZIN3 620 aa5.74□□□□□ -1.49
SMARCB1-208ENST00000634926 SYT9Q86SS6 491 aa5.74□□□□□ -1.49
SMARCB1-208ENST00000634926 ZNF417Q8TAU3 575 aa5.74□□□□□ -1.49
SMARCB1-208ENST00000634926 ZNF587Q96SQ5 575 aaPredicted RBP5.74□□□□□ -1.49
SMARCB1-208ENST00000634926 PRR12Q9ULL5 1215 aa5.74□□□□□ -1.49
SMARCB1-208ENST00000634926 IQSEC3Q9UPP2 1182 aaPredicted RBP5.74□□□□□ -1.49
SMARCB1-208ENST00000634926 APBA3O96018 575 aa5.73□□□□□ -1.49
SMARCB1-208ENST00000634926 FAM157BP0CG42 384 aa5.73□□□□□ -1.49
SMARCB1-208ENST00000634926 NID1P14543 1247 aa5.73□□□□□ -1.49
SMARCB1-208ENST00000634926 PRRT3Q5FWE3 981 aa5.73□□□□□ -1.49
SMARCB1-208ENST00000634926 ARSJQ5FYB0 599 aaPredicted RBP5.73□□□□□ -1.49
SMARCB1-208ENST00000634926 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
SMARCB1-208ENST00000634926 MBTPS1Q14703 1052 aa5.72□□□□□ -1.49
SMARCB1-208ENST00000634926 MICALL1Q8N3F8 863 aa5.72□□□□□ -1.49
SMARCB1-208ENST00000634926 MTMR14Q8NCE2 650 aa5.72□□□□□ -1.49
SMARCB1-208ENST00000634926 C1orf216Q8TAB5 229 aa5.72□□□□□ -1.49
SMARCB1-208ENST00000634926 SLC30A3Q99726 388 aa5.72□□□□□ -1.49
SMARCB1-208ENST00000634926 NIFKQ9BYG3 293 aaKnown RBP5.72□□□□□ -1.49
SMARCB1-208ENST00000634926 MARK1Q9P0L2 795 aa5.72□□□□□ -1.49
SMARCB1-208ENST00000634926 PARP3Q9Y6F1 533 aa5.72□□□□□ -1.49
SMARCB1-208ENST00000634926 NISCHQ9Y2I1 1504 aa5.71□□□□□ -1.5
SMARCB1-208ENST00000634926 INHAP05111 366 aa5.71□□□□□ -1.5
SMARCB1-208ENST00000634926 H2AFB1P0C5Y9 115 aa5.71□□□□□ -1.5
SMARCB1-208ENST00000634926 H2AFB2P0C5Z0 115 aa5.71□□□□□ -1.5
SMARCB1-208ENST00000634926 GDF10P55107 478 aa5.71□□□□□ -1.5
SMARCB1-208ENST00000634926 ADGRE1Q14246 886 aa5.71□□□□□ -1.5
SMARCB1-208ENST00000634926 SHISA2Q6UWI4 295 aa5.71□□□□□ -1.5
SMARCB1-208ENST00000634926 ARID1BQ8NFD5 2236 aaPredicted RBP5.7□□□□□ -1.5
SMARCB1-208ENST00000634926 ADARB2-AS1A8MUL3 147 aa5.7□□□□□ -1.5
SMARCB1-208ENST00000634926 SMTNP53814 917 aa5.7□□□□□ -1.5
SMARCB1-208ENST00000634926 C20orf204Q6ZNR8 217 aa5.7□□□□□ -1.5
SMARCB1-208ENST00000634926 PRDM6Q9NQX0 595 aa5.7□□□□□ -1.5
SMARCB1-208ENST00000634926 SERTAD1Q9UHV2 236 aa5.7□□□□□ -1.5
SMARCB1-208ENST00000634926 DOLKQ9UPQ8 538 aa5.7□□□□□ -1.5
SMARCB1-208ENST00000634926 TMEM229AB2RXF0 380 aa5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 TXLNAP40222 546 aa5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 SFSWAPQ12872 951 aaKnown RBP5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 TRIM28Q13263 835 aaKnown RBP5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 OXLD1Q5BKU9 147 aa5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 SAMD5Q5TGI4 173 aa5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 C7orf43Q8WVR3 580 aa5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 SSBP4Q9BWG4 385 aaPredicted RBP5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 CHIC2Q9UKJ5 165 aa5.69□□□□□ -1.5
SMARCB1-208ENST00000634926 SPDYE3A6NKU9 549 aa5.68□□□□□ -1.5
SMARCB1-208ENST00000634926 SIN3BO75182 1162 aa5.68□□□□□ -1.5
SMARCB1-208ENST00000634926 ALAS2P22557 587 aa5.68□□□□□ -1.5
SMARCB1-208ENST00000634926 NRG1Q02297 640 aaPredicted RBP5.68□□□□□ -1.5
SMARCB1-208ENST00000634926 USP4Q13107 963 aa5.68□□□□□ -1.5
SMARCB1-208ENST00000634926 MCTP1Q6DN14 999 aa5.68□□□□□ -1.5
SMARCB1-208ENST00000634926 RAB44Q7Z6P3 723 aaPredicted RBP5.68□□□□□ -1.5
SMARCB1-208ENST00000634926 ZDHHC1Q8WTX9 485 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms