RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 FAM200AQ8TCP9 573 aa9.48□□□□□ -0.89
LINC00254-202ENST00000633813 GAS2L1Q99501 681 aaPredicted RBP9.48□□□□□ -0.89
LINC00254-202ENST00000633813 CABP1Q9NZU7 370 aa9.48□□□□□ -0.89
LINC00254-202ENST00000633813 CHMP3Q9Y3E7 222 aa9.48□□□□□ -0.89
LINC00254-202ENST00000633813 CC2D2AQ9P2K1 1620 aa9.48□□□□□ -0.89
LINC00254-202ENST00000633813 HMGXB3Q12766 1538 aa9.47□□□□□ -0.89
LINC00254-202ENST00000633813 H7C1W4 665 aa9.47□□□□□ -0.89
LINC00254-202ENST00000633813 PLA2G4AP47712 749 aa9.47□□□□□ -0.89
LINC00254-202ENST00000633813 EPHA4P54764 986 aa9.47□□□□□ -0.89
LINC00254-202ENST00000633813 TSEN2Q8NCE0 465 aaKnown RBP9.47□□□□□ -0.89
LINC00254-202ENST00000633813 GMCL1Q96IK5 515 aa9.47□□□□□ -0.89
LINC00254-202ENST00000633813 NOVA2Q9UNW9 492 aaKnown RBP9.47□□□□□ -0.89
LINC00254-202ENST00000633813 IQSEC3Q9UPP2 1182 aaPredicted RBP9.47□□□□□ -0.89
LINC00254-202ENST00000633813 F11P03951 625 aa9.46□□□□□ -0.9
LINC00254-202ENST00000633813 ELOAQ14241 798 aaKnown RBP9.46□□□□□ -0.9
LINC00254-202ENST00000633813 NBPF1Q3BBV0 1214 aa9.46□□□□□ -0.9
LINC00254-202ENST00000633813 RIPOR1Q6ZS17 1223 aa9.46□□□□□ -0.9
LINC00254-202ENST00000633813 SLC9A9Q8IVB4 645 aa9.46□□□□□ -0.9
LINC00254-202ENST00000633813 HINFPQ9BQA5 517 aa9.46□□□□□ -0.9
LINC00254-202ENST00000633813 PPP1R15AO75807 674 aaPredicted RBP9.45□□□□□ -0.9
LINC00254-202ENST00000633813 ATG7O95352 703 aa9.45□□□□□ -0.9
LINC00254-202ENST00000633813 SRPK2P78362 688 aaKnown RBP9.45□□□□□ -0.9
LINC00254-202ENST00000633813 FOXK2Q01167 660 aa9.45□□□□□ -0.9
LINC00254-202ENST00000633813 C1orf216Q8TAB5 229 aa9.45□□□□□ -0.9
LINC00254-202ENST00000633813 CDC14CA4D256 554 aa9.44□□□□□ -0.9
LINC00254-202ENST00000633813 CSB-PGBD3P0DP91 1061 aa9.44□□□□□ -0.9
LINC00254-202ENST00000633813 VSIG8P0DPA2 414 aa9.44□□□□□ -0.9
LINC00254-202ENST00000633813 PSMA6P60900 246 aaKnown RBP9.44□□□□□ -0.9
LINC00254-202ENST00000633813 SV2AQ7L0J3 742 aa9.44□□□□□ -0.9
LINC00254-202ENST00000633813 PGBD3Q8N328 593 aa9.44□□□□□ -0.9
LINC00254-202ENST00000633813 GAS2L2Q8NHY3 880 aa9.44□□□□□ -0.9
LINC00254-202ENST00000633813 NANOS1Q8WY41 292 aaKnown RBP9.44□□□□□ -0.9
LINC00254-202ENST00000633813 AIDAQ96BJ3 306 aa9.44□□□□□ -0.9
LINC00254-202ENST00000633813 ARXQ96QS3 562 aa9.44□□□□□ -0.9
LINC00254-202ENST00000633813 CCDC88BA6NC98 1476 aa9.44□□□□□ -0.9
LINC00254-202ENST00000633813 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
LINC00254-202ENST00000633813 TEAD4Q15561 434 aa9.43□□□□□ -0.9
LINC00254-202ENST00000633813 TRIM22Q8IYM9 498 aa9.43□□□□□ -0.9
LINC00254-202ENST00000633813 TSPAN10Q9H1Z9 355 aaPredicted RBP9.43□□□□□ -0.9
LINC00254-202ENST00000633813 ZNF232Q9UNY5 417 aa9.43□□□□□ -0.9
LINC00254-202ENST00000633813 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
LINC00254-202ENST00000633813 NOS2P35228 1153 aa9.42□□□□□ -0.9
LINC00254-202ENST00000633813 FOXR1Q6PIV2 292 aa9.42□□□□□ -0.9
LINC00254-202ENST00000633813 GPAMQ9HCL2 828 aa9.42□□□□□ -0.9
LINC00254-202ENST00000633813 ZDHHC3Q9NYG2 299 aa9.42□□□□□ -0.9
LINC00254-202ENST00000633813 ACIN1Q9UKV3 1341 aaKnown RBP9.41□□□□□ -0.9
LINC00254-202ENST00000633813 SERTM1A2A2V5 107 aa9.41□□□□□ -0.9
LINC00254-202ENST00000633813 PPP1R12BO60237 982 aaPredicted RBP9.41□□□□□ -0.9
LINC00254-202ENST00000633813 MSX1P28360 303 aa9.41□□□□□ -0.9
LINC00254-202ENST00000633813 LBRQ14739 615 aaKnown RBP9.41□□□□□ -0.9
LINC00254-202ENST00000633813 SWI5Q1ZZU3 235 aa9.41□□□□□ -0.9
LINC00254-202ENST00000633813 EFHC2Q5JST6 749 aa9.41□□□□□ -0.9
LINC00254-202ENST00000633813 TBCELQ5QJ74 424 aa9.41□□□□□ -0.9
LINC00254-202ENST00000633813 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
LINC00254-202ENST00000633813 VWA5B2Q8N398 1253 aa9.41□□□□□ -0.9
LINC00254-202ENST00000633813 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
LINC00254-202ENST00000633813 ATAD2Q6PL18 1390 aa9.4□□□□□ -0.9
LINC00254-202ENST00000633813 SCG3Q8WXD2 468 aaKnown RBP9.4□□□□□ -0.9
LINC00254-202ENST00000633813 ARID3AQ99856 593 aa9.4□□□□□ -0.9
LINC00254-202ENST00000633813 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
LINC00254-202ENST00000633813 ERBB4Q15303 1308 aa9.39□□□□□ -0.91
LINC00254-202ENST00000633813 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
LINC00254-202ENST00000633813 ZNF837Q96EG3 531 aaPredicted RBP9.39□□□□□ -0.91
LINC00254-202ENST00000633813 CRISPLD1Q9H336 500 aa9.39□□□□□ -0.91
LINC00254-202ENST00000633813 CUEDC1Q9NWM3 386 aaPredicted RBP9.39□□□□□ -0.91
LINC00254-202ENST00000633813 ZMIZ1Q9ULJ6 1067 aa9.39□□□□□ -0.91
LINC00254-202ENST00000633813 PARP3Q9Y6F1 533 aa9.39□□□□□ -0.91
LINC00254-202ENST00000633813 IGFBP4P22692 258 aa9.38□□□□□ -0.91
LINC00254-202ENST00000633813 DBN1Q16643 649 aa9.38□□□□□ -0.91
LINC00254-202ENST00000633813 ARSJQ5FYB0 599 aaPredicted RBP9.38□□□□□ -0.91
LINC00254-202ENST00000633813 LCE2AQ5TA79 106 aaPredicted RBP9.38□□□□□ -0.91
LINC00254-202ENST00000633813 ZDHHC1Q8WTX9 485 aa9.38□□□□□ -0.91
LINC00254-202ENST00000633813 CHMP7Q8WUX9 453 aaPredicted RBP9.38□□□□□ -0.91
LINC00254-202ENST00000633813 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
LINC00254-202ENST00000633813 RUBCNLQ9H714 662 aa9.38□□□□□ -0.91
LINC00254-202ENST00000633813 EML1O00423 815 aa9.37□□□□□ -0.91
LINC00254-202ENST00000633813 ATP4AP20648 1035 aa9.37□□□□□ -0.91
LINC00254-202ENST00000633813 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
LINC00254-202ENST00000633813 BICDL1Q6ZP65 573 aa9.37□□□□□ -0.91
LINC00254-202ENST00000633813 STK32AQ8WU08 396 aa9.37□□□□□ -0.91
LINC00254-202ENST00000633813 C21orf2O43822 256 aa9.36□□□□□ -0.91
LINC00254-202ENST00000633813 GPC6Q9Y625 555 aaPredicted RBP9.36□□□□□ -0.91
LINC00254-202ENST00000633813 GJA3Q9Y6H8 435 aa9.36□□□□□ -0.91
LINC00254-202ENST00000633813 FOXO3O43524 673 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 GMPRP36959 345 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 TXLNAP40222 546 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 TMEM164Q5U3C3 297 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 C1orf53Q5VUE5 145 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 FIGNL1Q6PIW4 674 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 POTEAQ6S8J7 498 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 NLRP8Q86W28 1048 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 VTI1AQ96AJ9 217 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 C2orf49Q9BVC5 232 aaPredicted RBP9.35□□□□□ -0.91
LINC00254-202ENST00000633813 PHF24Q9UPV7 400 aa9.35□□□□□ -0.91
LINC00254-202ENST00000633813 WIPF1O43516 503 aa9.34□□□□□ -0.91
LINC00254-202ENST00000633813 LGR5O75473 907 aa9.34□□□□□ -0.91
LINC00254-202ENST00000633813 WEE1P30291 646 aa9.34□□□□□ -0.91
LINC00254-202ENST00000633813 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
LINC00254-202ENST00000633813 NEUROD4Q9HD90 331 aa9.34□□□□□ -0.91
LINC00254-202ENST00000633813 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms