RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 TAF7Q15545 349 aaPredicted RBP28.28■■■□□ 2.12
RAB28-208ENST00000630951 GPR162Q16538 588 aa28.27■■■□□ 2.12
RAB28-208ENST00000630951 SRP68Q9UHB9 627 aaKnown RBP28.26■■■□□ 2.12
RAB28-208ENST00000630951 ZPR1O75312 459 aa28.25■■■□□ 2.11
RAB28-208ENST00000630951 COL15A1P39059 1388 aa28.24■■■□□ 2.11
RAB28-208ENST00000630951 DLG5Q8TDM6 1919 aa28.23■■■□□ 2.11
RAB28-208ENST00000630951 CANXP27824 592 aaKnown RBP28.23■■■□□ 2.11
RAB28-208ENST00000630951 FKBP8Q14318 412 aa28.23■■■□□ 2.11
RAB28-208ENST00000630951 NARFQ9UHQ1 456 aa28.23■■■□□ 2.11
RAB28-208ENST00000630951 ZNF316A6NFI3 1004 aaPredicted RBP28.22■■■□□ 2.11
RAB28-208ENST00000630951 YY1P25490 414 aa28.22■■■□□ 2.11
RAB28-208ENST00000630951 EIF5P55010 431 aaKnown RBP28.22■■■□□ 2.11
RAB28-208ENST00000630951 WDR43Q15061 677 aaKnown RBP eCLIP28.22■■■□□ 2.11
RAB28-208ENST00000630951 PNISRQ8TF01 805 aaKnown RBP28.22■■■□□ 2.11
RAB28-208ENST00000630951 PARP3Q9Y6F1 533 aa28.22■■■□□ 2.11
RAB28-208ENST00000630951 SNRPA1P09661 255 aaKnown RBP28.21■■■□□ 2.11
RAB28-208ENST00000630951 USPL1Q5W0Q7 1092 aa28.2■■■□□ 2.11
RAB28-208ENST00000630951 PELP1Q8IZL8 1130 aaKnown RBP28.19■■■□□ 2.1
RAB28-208ENST00000630951 A0A087WZG4 1122 aa28.19■■■□□ 2.1
RAB28-208ENST00000630951 IL6STP40189 918 aaPredicted RBP28.19■■■□□ 2.1
RAB28-208ENST00000630951 RIPK4P57078 832 aa28.19■■■□□ 2.1
RAB28-208ENST00000630951 TM4SF1P30408 202 aa28.17■■■□□ 2.1
RAB28-208ENST00000630951 TMPOP42166 694 aaKnown RBP28.17■■■□□ 2.1
RAB28-208ENST00000630951 MIS18AQ9NYP9 233 aa28.17■■■□□ 2.1
RAB28-208ENST00000630951 USP16Q9Y5T5 823 aa28.17■■■□□ 2.1
RAB28-208ENST00000630951 GRIN3BO60391 1043 aa28.16■■■□□ 2.1
RAB28-208ENST00000630951 A1BGP04217 495 aa28.16■■■□□ 2.1
RAB28-208ENST00000630951 THUMPD2Q9BTF0 503 aaKnown RBP28.16■■■□□ 2.1
RAB28-208ENST00000630951 ADAMTS8Q9UP79 889 aa28.16■■■□□ 2.1
RAB28-208ENST00000630951 YBX3P16989 372 aaKnown RBP eCLIP28.16■■■□□ 2.1
RAB28-208ENST00000630951 TGFB2P61812 414 aa28.16■■■□□ 2.1
RAB28-208ENST00000630951 RUNDC1Q96C34 613 aa28.16■■■□□ 2.1
RAB28-208ENST00000630951 DDR1Q08345 913 aa28.15■■■□□ 2.1
RAB28-208ENST00000630951 LMOD3Q0VAK6 560 aa28.15■■■□□ 2.1
RAB28-208ENST00000630951 C10orf71Q711Q0 1435 aa28.15■■■□□ 2.1
RAB28-208ENST00000630951 NPM2Q86SE8 214 aaKnown RBP28.14■■■□□ 2.1
RAB28-208ENST00000630951 KIF13BQ9NQT8 1826 aa28.14■■■□□ 2.09
RAB28-208ENST00000630951 PRAMEF22A3QJZ6 481 aa28.13■■■□□ 2.09
RAB28-208ENST00000630951 CCDC146Q8IYE0 955 aa28.13■■■□□ 2.09
RAB28-208ENST00000630951 BCL2L12Q9HB09 334 aa28.13■■■□□ 2.09
RAB28-208ENST00000630951 POLRMTO00411 1230 aaKnown RBP28.13■■■□□ 2.09
RAB28-208ENST00000630951 NFIXQ14938 502 aa28.11■■■□□ 2.09
RAB28-208ENST00000630951 ZNF330Q9Y3S2 320 aaPredicted RBP28.11■■■□□ 2.09
RAB28-208ENST00000630951 CHD4Q14839 1912 aa28.1■■■□□ 2.09
RAB28-208ENST00000630951 PXDNLA1KZ92 1463 aa28.1■■■□□ 2.09
RAB28-208ENST00000630951 EIF4A1P60842 406 aaKnown RBP28.1■■■□□ 2.09
RAB28-208ENST00000630951 BABAM1Q9NWV8 329 aa28.1■■■□□ 2.09
RAB28-208ENST00000630951 KDM3BQ7LBC6 1761 aa28.09■■■□□ 2.09
RAB28-208ENST00000630951 TBC1D2BQ9UPU7 963 aa28.09■■■□□ 2.09
RAB28-208ENST00000630951 GIGYF1O75420 1035 aaPredicted RBP28.08■■■□□ 2.09
RAB28-208ENST00000630951 RRP7AQ9Y3A4 280 aaKnown RBP28.08■■■□□ 2.09
RAB28-208ENST00000630951 NEUROD2Q15784 382 aa28.07■■■□□ 2.08
RAB28-208ENST00000630951 A0A0G2JLW4 131 aa28.06■■■□□ 2.08
RAB28-208ENST00000630951 TSPYL4Q9UJ04 414 aa28.06■■■□□ 2.08
RAB28-208ENST00000630951 NBPF26B4DH59 902 aa28.04■■■□□ 2.08
RAB28-208ENST00000630951 CAMTA2O94983 1202 aa28.04■■■□□ 2.08
RAB28-208ENST00000630951 PIP4K2AP48426 406 aaPredicted RBP28.04■■■□□ 2.08
RAB28-208ENST00000630951 NBPF10Q6P3W6 841 aaKnown RBP28.04■■■□□ 2.08
RAB28-208ENST00000630951 DZIP3Q86Y13 1208 aaKnown RBP28.04■■■□□ 2.08
RAB28-208ENST00000630951 NBPF15Q8N660 670 aa28.04■■■□□ 2.08
RAB28-208ENST00000630951 KIAA1551Q9HCM1 1747 aa28.04■■■□□ 2.08
RAB28-208ENST00000630951 SERPINB2P05120 415 aa28.03■■■□□ 2.08
RAB28-208ENST00000630951 DPEP1P16444 411 aa28.03■■■□□ 2.08
RAB28-208ENST00000630951 TRIM35Q9UPQ4 493 aa28.03■■■□□ 2.08
RAB28-208ENST00000630951 WWC3Q9ULE0 1092 aa28.03■■■□□ 2.08
RAB28-208ENST00000630951 SCN7AQ01118 1682 aa28.02■■■□□ 2.08
RAB28-208ENST00000630951 TBC1D9BQ66K14 1250 aa28.02■■■□□ 2.08
RAB28-208ENST00000630951 BICDL1Q6ZP65 573 aa28.01■■■□□ 2.07
RAB28-208ENST00000630951 N4BP2Q86UW6 1770 aaPredicted RBP28.01■■■□□ 2.07
RAB28-208ENST00000630951 ANP32CO43423 234 aa28■■■□□ 2.07
RAB28-208ENST00000630951 KCNA3P22001 575 aa28■■■□□ 2.07
RAB28-208ENST00000630951 CLEC4GQ6UXB4 293 aa28■■■□□ 2.07
RAB28-208ENST00000630951 LAMB4A4D0S4 1761 aa28■■■□□ 2.07
RAB28-208ENST00000630951 RGL2O15211 777 aa28■■■□□ 2.07
RAB28-208ENST00000630951 NRXN2Q9P2S2 1712 aa28■■■□□ 2.07
RAB28-208ENST00000630951 CARMIL3Q8ND23 1372 aa27.98■■■□□ 2.07
RAB28-208ENST00000630951 AFDNP55196 1824 aaKnown RBP27.98■■■□□ 2.07
RAB28-208ENST00000630951 CHL1O00533 1208 aa27.97■■■□□ 2.07
RAB28-208ENST00000630951 CCDC184Q52MB2 194 aa27.97■■■□□ 2.07
RAB28-208ENST00000630951 SETDB2Q96T68 719 aa27.97■■■□□ 2.07
RAB28-208ENST00000630951 PIM2Q9P1W9 311 aa27.97■■■□□ 2.07
RAB28-208ENST00000630951 BCS1LQ9Y276 419 aa27.97■■■□□ 2.07
RAB28-208ENST00000630951 ZNF652Q9Y2D9 606 aa27.97■■■□□ 2.07
RAB28-208ENST00000630951 APAF1O14727 1248 aa27.96■■■□□ 2.07
RAB28-208ENST00000630951 ZNF784Q8NCA9 323 aaPredicted RBP27.96■■■□□ 2.07
RAB28-208ENST00000630951 ERBB4Q15303 1308 aa27.95■■■□□ 2.07
RAB28-208ENST00000630951 BCORQ6W2J9 1755 aa27.95■■■□□ 2.07
RAB28-208ENST00000630951 CHRNA5P30532 468 aa27.94■■■□□ 2.06
RAB28-208ENST00000630951 BRCA1P38398 1863 aaKnown RBP27.94■■■□□ 2.06
RAB28-208ENST00000630951 DALRD3Q5D0E6 543 aaKnown RBP27.92■■■□□ 2.06
RAB28-208ENST00000630951 PRR5LQ6MZQ0 368 aa27.91■■■□□ 2.06
RAB28-208ENST00000630951 CFAP44Q96MT7 982 aa27.91■■■□□ 2.06
RAB28-208ENST00000630951 LAS1LQ9Y4W2 734 aaKnown RBP27.91■■■□□ 2.06
RAB28-208ENST00000630951 BRIP1Q9BX63 1249 aa27.91■■■□□ 2.06
RAB28-208ENST00000630951 ERVV-1B6SEH8 477 aa27.9■■■□□ 2.06
RAB28-208ENST00000630951 MRS2Q9HD23 443 aa27.9■■■□□ 2.06
RAB28-208ENST00000630951 MYL6BP14649 208 aa27.89■■■□□ 2.06
RAB28-208ENST00000630951 NGEFQ8N5V2 710 aa27.89■■■□□ 2.06
RAB28-208ENST00000630951 CNBD1Q8NA66 436 aa27.89■■■□□ 2.06
RAB28-208ENST00000630951 PDZRN3Q9UPQ7 1066 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms