RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	TFCP2L1	Q9NZI6	479 aa		33.74	■■■□□ 2.99
UBE3A-222	ENST00000630907		E9PSI1	815 aa		33.73	■■■□□ 2.99
UBE3A-222	ENST00000630907	CCDC87	Q9NVE4	849 aa		33.73	■■■□□ 2.99
UBE3A-222	ENST00000630907	INTS5	Q6P9B9	1019 aa	Known RBP	33.72	■■■□□ 2.99
UBE3A-222	ENST00000630907	GNPAT	O15228	680 aa		33.71	■■■□□ 2.99
UBE3A-222	ENST00000630907	SLFN5	Q08AF3	891 aa		33.7	■■■□□ 2.99
UBE3A-222	ENST00000630907	R3HDM1	Q15032	1099 aa	Known RBP	33.7	■■■□□ 2.99
UBE3A-222	ENST00000630907	DUSP27	Q5VZP5	1158 aa		33.7	■■■□□ 2.99
UBE3A-222	ENST00000630907	HOXB7	P09629	217 aa		33.69	■■■□□ 2.98
UBE3A-222	ENST00000630907	C8orf58	Q8NAV2	365 aa		33.69	■■■□□ 2.98
UBE3A-222	ENST00000630907	CDCA7L	Q96GN5	454 aa		33.69	■■■□□ 2.98
UBE3A-222	ENST00000630907	ZBED9	Q6R2W3	1325 aa		33.69	■■■□□ 2.98
UBE3A-222	ENST00000630907	RPS6KA4	O75676	772 aa		33.68	■■■□□ 2.98
UBE3A-222	ENST00000630907	RTCB	Q9Y3I0	505 aa	Known RBP	33.68	■■■□□ 2.98
UBE3A-222	ENST00000630907	ELL2	O00472	640 aa	Predicted RBP	33.67	■■■□□ 2.98
UBE3A-222	ENST00000630907	A1BG	P04217	495 aa		33.67	■■■□□ 2.98
UBE3A-222	ENST00000630907	ZBTB1	Q9Y2K1	713 aa		33.67	■■■□□ 2.98
UBE3A-222	ENST00000630907	PSD	A5PKW4	1024 aa	Predicted RBP	33.66	■■■□□ 2.98
UBE3A-222	ENST00000630907	EIF2S2	P20042	333 aa	Known RBP	33.66	■■■□□ 2.98
UBE3A-222	ENST00000630907	CANX	P27824	592 aa	Known RBP	33.65	■■■□□ 2.98
UBE3A-222	ENST00000630907	MYH14	Q7Z406	1995 aa	Known RBP	33.65	■■■□□ 2.98
UBE3A-222	ENST00000630907	SSFA2	P28290	1259 aa		33.64	■■■□□ 2.98
UBE3A-222	ENST00000630907	EXOSC9	Q06265	439 aa	Known RBP	33.64	■■■□□ 2.98
UBE3A-222	ENST00000630907	FLAD1	Q8NFF5	587 aa		33.64	■■■□□ 2.98
UBE3A-222	ENST00000630907	LAMB4	A4D0S4	1761 aa		33.63	■■■□□ 2.97
UBE3A-222	ENST00000630907	SOS1	Q07889	1333 aa	Predicted RBP	33.63	■■■□□ 2.97
UBE3A-222	ENST00000630907	PNPLA7	Q6ZV29	1317 aa		33.63	■■■□□ 2.97
UBE3A-222	ENST00000630907	PHF14	O94880	888 aa		33.63	■■■□□ 2.97
UBE3A-222	ENST00000630907	AMIGO3	Q86WK7	504 aa		33.63	■■■□□ 2.97
UBE3A-222	ENST00000630907	TSPYL6	Q8N831	410 aa		33.63	■■■□□ 2.97
UBE3A-222	ENST00000630907	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.62	■■■□□ 2.97
UBE3A-222	ENST00000630907	SMIM5	Q71RC9	77 aa		33.62	■■■□□ 2.97
UBE3A-222	ENST00000630907	TRMT2A	Q8IZ69	625 aa	Known RBP	33.62	■■■□□ 2.97
UBE3A-222	ENST00000630907	TWISTNB	Q3B726	338 aa	Predicted RBP	33.61	■■■□□ 2.97
UBE3A-222	ENST00000630907	TRAPPC3L	Q5T215	181 aa		33.61	■■■□□ 2.97
UBE3A-222	ENST00000630907	HDGFL1	Q5TGJ6	251 aa		33.61	■■■□□ 2.97
UBE3A-222	ENST00000630907	ADRA2B	P18089	450 aa		33.6	■■■□□ 2.97
UBE3A-222	ENST00000630907	NECTIN2	Q92692	538 aa		33.6	■■■□□ 2.97
UBE3A-222	ENST00000630907	ERBB4	Q15303	1308 aa		33.59	■■■□□ 2.97
UBE3A-222	ENST00000630907	UBR3	Q6ZT12	1888 aa		33.59	■■■□□ 2.97
UBE3A-222	ENST00000630907	NBPF26	B4DH59	902 aa		33.59	■■■□□ 2.97
UBE3A-222	ENST00000630907	IL6ST	P40189	918 aa	Predicted RBP	33.59	■■■□□ 2.97
UBE3A-222	ENST00000630907	PIP4K2A	P48426	406 aa	Predicted RBP	33.59	■■■□□ 2.97
UBE3A-222	ENST00000630907	NBPF10	Q6P3W6	841 aa	Known RBP	33.59	■■■□□ 2.97
UBE3A-222	ENST00000630907	COL23A1	Q86Y22	540 aa	Predicted RBP	33.59	■■■□□ 2.97
UBE3A-222	ENST00000630907	NBPF15	Q8N660	670 aa		33.59	■■■□□ 2.97
UBE3A-222	ENST00000630907	EIF5	P55010	431 aa	Known RBP	33.58	■■■□□ 2.97
UBE3A-222	ENST00000630907	CHMP4A	Q9BY43	222 aa		33.58	■■■□□ 2.97
UBE3A-222	ENST00000630907	TUBGCP6	Q96RT7	1819 aa		33.58	■■■□□ 2.97
UBE3A-222	ENST00000630907	MSH5	O43196	834 aa		33.57	■■■□□ 2.96
UBE3A-222	ENST00000630907	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.57	■■■□□ 2.96
UBE3A-222	ENST00000630907	QSER1	Q2KHR3	1735 aa		33.56	■■■□□ 2.96
UBE3A-222	ENST00000630907	NPM2	Q86SE8	214 aa	Known RBP	33.56	■■■□□ 2.96
UBE3A-222	ENST00000630907	ARHGEF1	Q92888	912 aa	Known RBP	33.56	■■■□□ 2.96
UBE3A-222	ENST00000630907	VAMP4	O75379	141 aa		33.55	■■■□□ 2.96
UBE3A-222	ENST00000630907	YTHDC1	Q96MU7	727 aa	Known RBP	33.55	■■■□□ 2.96
UBE3A-222	ENST00000630907	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.55	■■■□□ 2.96
UBE3A-222	ENST00000630907		A0A087WZG4	1122 aa		33.54	■■■□□ 2.96
UBE3A-222	ENST00000630907	MYL6B	P14649	208 aa		33.54	■■■□□ 2.96
UBE3A-222	ENST00000630907	COL15A1	P39059	1388 aa		33.54	■■■□□ 2.96
UBE3A-222	ENST00000630907	RFC4	P35249	363 aa		33.53	■■■□□ 2.96
UBE3A-222	ENST00000630907	PDIA6	Q15084	440 aa		33.53	■■■□□ 2.96
UBE3A-222	ENST00000630907	CCDC30	Q5VVM6	783 aa		33.53	■■■□□ 2.96
UBE3A-222	ENST00000630907	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.52	■■■□□ 2.96
UBE3A-222	ENST00000630907	CHPF2	Q9P2E5	772 aa		33.52	■■■□□ 2.96
UBE3A-222	ENST00000630907	DBF4	Q9UBU7	674 aa	Predicted RBP	33.51	■■■□□ 2.95
UBE3A-222	ENST00000630907	PROSER3	Q2NL68	480 aa		33.5	■■■□□ 2.95
UBE3A-222	ENST00000630907	ANXA1	P04083	346 aa		33.49	■■■□□ 2.95
UBE3A-222	ENST00000630907	SLC16A10	Q8TF71	515 aa		33.49	■■■□□ 2.95
UBE3A-222	ENST00000630907	ARX	Q96QS3	562 aa		33.48	■■■□□ 2.95
UBE3A-222	ENST00000630907	NARF	Q9UHQ1	456 aa		33.47	■■■□□ 2.95
UBE3A-222	ENST00000630907	CASZ1	Q86V15	1759 aa		33.47	■■■□□ 2.95
UBE3A-222	ENST00000630907	ZPR1	O75312	459 aa		33.46	■■■□□ 2.95
UBE3A-222	ENST00000630907	LRP10	Q7Z4F1	713 aa		33.46	■■■□□ 2.95
UBE3A-222	ENST00000630907	DZIP3	Q86Y13	1208 aa	Known RBP	33.46	■■■□□ 2.95
UBE3A-222	ENST00000630907	STK31	Q9BXU1	1019 aa		33.46	■■■□□ 2.95
UBE3A-222	ENST00000630907	SRP68	Q9UHB9	627 aa	Known RBP	33.46	■■■□□ 2.95
UBE3A-222	ENST00000630907	TBC1D2B	Q9UPU7	963 aa		33.46	■■■□□ 2.95
UBE3A-222	ENST00000630907	USP42	Q9H9J4	1324 aa	Known RBP	33.46	■■■□□ 2.95
UBE3A-222	ENST00000630907	TCERG1	O14776	1098 aa	Known RBP	33.45	■■■□□ 2.95
UBE3A-222	ENST00000630907	HYPK	Q9NX55	129 aa		33.45	■■■□□ 2.95
UBE3A-222	ENST00000630907	ZBTB7A	O95365	584 aa		33.44	■■■□□ 2.94
UBE3A-222	ENST00000630907	USPL1	Q5W0Q7	1092 aa		33.43	■■■□□ 2.94
UBE3A-222	ENST00000630907	CT47B1	P0C2W7	299 aa	Predicted RBP	33.42	■■■□□ 2.94
UBE3A-222	ENST00000630907	MTFR1L	Q9H019	292 aa		33.42	■■■□□ 2.94
UBE3A-222	ENST00000630907	C4A	P0C0L4	1744 aa		33.42	■■■□□ 2.94
UBE3A-222	ENST00000630907	COPS6	Q7L5N1	327 aa		33.41	■■■□□ 2.94
UBE3A-222	ENST00000630907	XAGE3	Q8WTP9	111 aa		33.41	■■■□□ 2.94
UBE3A-222	ENST00000630907	SLC4A2	P04920	1241 aa		33.4	■■■□□ 2.94
UBE3A-222	ENST00000630907	GYS1	P13807	737 aa		33.4	■■■□□ 2.94
UBE3A-222	ENST00000630907	AIMP1	Q12904	312 aa	Known RBP	33.4	■■■□□ 2.94
UBE3A-222	ENST00000630907	KIF6	Q6ZMV9	814 aa		33.4	■■■□□ 2.94
UBE3A-222	ENST00000630907	TTLL7	Q6ZT98	887 aa		33.4	■■■□□ 2.94
UBE3A-222	ENST00000630907	CAMTA2	O94983	1202 aa		33.39	■■■□□ 2.94
UBE3A-222	ENST00000630907	ZNF428	Q96B54	188 aa		33.39	■■■□□ 2.94
UBE3A-222	ENST00000630907	MSL1	Q68DK7	614 aa		33.38	■■■□□ 2.93
UBE3A-222	ENST00000630907	NLGN1	Q8N2Q7	840 aa		33.38	■■■□□ 2.93
UBE3A-222	ENST00000630907	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.38	■■■□□ 2.93
UBE3A-222	ENST00000630907	PHAX	Q9H814	394 aa	Known RBP	33.37	■■■□□ 2.93
UBE3A-222	ENST00000630907	BCL2L12	Q9HB09	334 aa		33.37	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms