RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 CABP4P57796 275 aa19.32■□□□□ 0.68
CDK7-215ENST00000629350 C1orf141Q5JVX7 400 aa19.32■□□□□ 0.68
CDK7-215ENST00000629350 NFATC2IPQ8NCF5 419 aa19.32■□□□□ 0.68
CDK7-215ENST00000629350 HSP90AB1P08238 724 aaKnown RBP19.31■□□□□ 0.68
CDK7-215ENST00000629350 PTCD1O75127 700 aaKnown RBP19.3■□□□□ 0.68
CDK7-215ENST00000629350 PPP2R1AP30153 589 aa19.3■□□□□ 0.68
CDK7-215ENST00000629350 KIF13BQ9NQT8 1826 aa19.3■□□□□ 0.68
CDK7-215ENST00000629350 U2SURPO15042 1029 aaKnown RBP19.29■□□□□ 0.68
CDK7-215ENST00000629350 POLD1P28340 1107 aa19.29■□□□□ 0.68
CDK7-215ENST00000629350 AKAP4Q5JQC9 854 aa19.29■□□□□ 0.68
CDK7-215ENST00000629350 DLG5Q8TDM6 1919 aa19.28■□□□□ 0.68
CDK7-215ENST00000629350 RNMTO43148 476 aaKnown RBP19.28■□□□□ 0.68
CDK7-215ENST00000629350 N4BP2Q86UW6 1770 aaPredicted RBP19.27■□□□□ 0.68
CDK7-215ENST00000629350 SSFA2P28290 1259 aa19.27■□□□□ 0.68
CDK7-215ENST00000629350 SLC39A6Q13433 755 aa19.27■□□□□ 0.68
CDK7-215ENST00000629350 PHACTR3Q96KR7 559 aa19.27■□□□□ 0.68
CDK7-215ENST00000629350 SLC52A2Q9HAB3 445 aa19.27■□□□□ 0.68
CDK7-215ENST00000629350 PHF12Q96QT6 1004 aa19.26■□□□□ 0.67
CDK7-215ENST00000629350 RSPH6AQ9H0K4 717 aa19.26■□□□□ 0.67
CDK7-215ENST00000629350 CNTNAP4Q9C0A0 1308 aa19.25■□□□□ 0.67
CDK7-215ENST00000629350 YY1P25490 414 aa19.25■□□□□ 0.67
CDK7-215ENST00000629350 YBX3P16989 372 aaKnown RBP eCLIP19.24■□□□□ 0.671e-6■■□□□ 12.8
CDK7-215ENST00000629350 BRCA1P38398 1863 aaKnown RBP19.23■□□□□ 0.67
CDK7-215ENST00000629350 RGL2O15211 777 aa19.23■□□□□ 0.67
CDK7-215ENST00000629350 PRKAR2BP31323 418 aa19.23■□□□□ 0.67
CDK7-215ENST00000629350 DNAJC10Q8IXB1 793 aa19.23■□□□□ 0.67
CDK7-215ENST00000629350 FLAD1Q8NFF5 587 aa19.23■□□□□ 0.67
CDK7-215ENST00000629350 CRKLP46109 303 aaKnown RBP19.22■□□□□ 0.67
CDK7-215ENST00000629350 IL17REQ8NFR9 667 aa19.22■□□□□ 0.67
CDK7-215ENST00000629350 INTS5Q6P9B9 1019 aaKnown RBP19.21■□□□□ 0.67
CDK7-215ENST00000629350 ARHGEF1Q92888 912 aaKnown RBP19.21■□□□□ 0.67
CDK7-215ENST00000629350 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
CDK7-215ENST00000629350 WWC3Q9ULE0 1092 aa19.21■□□□□ 0.67
CDK7-215ENST00000629350 CHRM1P11229 460 aaPredicted RBP19.2■□□□□ 0.66
CDK7-215ENST00000629350 RC3H1Q5TC82 1133 aaKnown RBP19.2■□□□□ 0.66
CDK7-215ENST00000629350 PELP1Q8IZL8 1130 aaKnown RBP19.2■□□□□ 0.66
CDK7-215ENST00000629350 AFDNP55196 1824 aaKnown RBP19.2■□□□□ 0.66
CDK7-215ENST00000629350 CEMIPQ8WUJ3 1361 aa19.19■□□□□ 0.66
CDK7-215ENST00000629350 RPS6KA4O75676 772 aa19.19■□□□□ 0.66
CDK7-215ENST00000629350 GYS1P13807 737 aa19.19■□□□□ 0.66
CDK7-215ENST00000629350 RTCBQ9Y3I0 505 aaKnown RBP19.19■□□□□ 0.66
CDK7-215ENST00000629350 PXDNLA1KZ92 1463 aa19.19■□□□□ 0.66
CDK7-215ENST00000629350 SCN7AQ01118 1682 aa19.19■□□□□ 0.66
CDK7-215ENST00000629350 C10orf71Q711Q0 1435 aa19.18■□□□□ 0.66
CDK7-215ENST00000629350 MMP10P09238 476 aa19.18■□□□□ 0.66
CDK7-215ENST00000629350 ZNF579Q8NAF0 562 aaKnown RBP19.18■□□□□ 0.66
CDK7-215ENST00000629350 KCNQ3O43525 872 aa19.17■□□□□ 0.66
CDK7-215ENST00000629350 GPR162Q16538 588 aa19.17■□□□□ 0.66
CDK7-215ENST00000629350 RNF25Q96BH1 459 aaPredicted RBP19.17■□□□□ 0.66
CDK7-215ENST00000629350 U2AF1L5P0DN76 240 aaPredicted RBP19.16■□□□□ 0.66
CDK7-215ENST00000629350 CYP19A1P11511 503 aaPredicted RBP19.16■□□□□ 0.66
CDK7-215ENST00000629350 U2AF1Q01081 240 aaKnown RBP eCLIP19.16■□□□□ 0.66
CDK7-215ENST00000629350 KIF12Q96FN5 646 aa19.16■□□□□ 0.66
CDK7-215ENST00000629350 CFAP53Q96M91 514 aa19.16■□□□□ 0.66
CDK7-215ENST00000629350 KDM3BQ7LBC6 1761 aa19.16■□□□□ 0.66
CDK7-215ENST00000629350 GNAT3A8MTJ3 354 aa19.15■□□□□ 0.66
CDK7-215ENST00000629350 DDR1Q08345 913 aa19.15■□□□□ 0.66
CDK7-215ENST00000629350 TRAPPC3LQ5T215 181 aa19.15■□□□□ 0.66
CDK7-215ENST00000629350 ZBTB1Q9Y2K1 713 aa19.15■□□□□ 0.66
CDK7-215ENST00000629350 SOS1Q07889 1333 aaPredicted RBP19.15■□□□□ 0.66
CDK7-215ENST00000629350 USP42Q9H9J4 1324 aaKnown RBP19.15■□□□□ 0.66
CDK7-215ENST00000629350 NRXN2Q9P2S2 1712 aa19.14■□□□□ 0.66
CDK7-215ENST00000629350 BCORQ6W2J9 1755 aa19.14■□□□□ 0.66
CDK7-215ENST00000629350 MAP3K13O43283 966 aa19.14■□□□□ 0.65
CDK7-215ENST00000629350 GAS2L2Q8NHY3 880 aa19.14■□□□□ 0.65
CDK7-215ENST00000629350 ZNF496Q96IT1 587 aaPredicted RBP19.14■□□□□ 0.65
CDK7-215ENST00000629350 CCDC87Q9NVE4 849 aa19.14■□□□□ 0.65
CDK7-215ENST00000629350 CD2APQ9Y5K6 639 aa19.14■□□□□ 0.65
CDK7-215ENST00000629350 DCTN1Q14203 1278 aa19.13■□□□□ 0.65
CDK7-215ENST00000629350 LAMB4A4D0S4 1761 aa19.12■□□□□ 0.65
CDK7-215ENST00000629350 COL15A1P39059 1388 aa19.12■□□□□ 0.65
CDK7-215ENST00000629350 MCM10Q7L590 875 aa19.12■□□□□ 0.65
CDK7-215ENST00000629350 HEG1Q9ULI3 1381 aa19.11■□□□□ 0.65
CDK7-215ENST00000629350 ZNF784Q8NCA9 323 aaPredicted RBP19.11■□□□□ 0.65
CDK7-215ENST00000629350 ANKRD31Q8N7Z5 1873 aa19.11■□□□□ 0.65
CDK7-215ENST00000629350 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
CDK7-215ENST00000629350 RFC4P35249 363 aa19.1■□□□□ 0.65
CDK7-215ENST00000629350 DDX10Q13206 875 aaKnown RBP19.1■□□□□ 0.65
CDK7-215ENST00000629350 BCL2L12Q9HB09 334 aa19.1■□□□□ 0.65
CDK7-215ENST00000629350 DLEC1Q9Y238 1755 aa19.09■□□□□ 0.65
CDK7-215ENST00000629350 COL11A2P13942 1736 aaPredicted RBP19.09■□□□□ 0.65
CDK7-215ENST00000629350 TEFQ10587 303 aa19.09■□□□□ 0.65
CDK7-215ENST00000629350 ZNF790Q6PG37 636 aa19.09■□□□□ 0.65
CDK7-215ENST00000629350 ARFGEF1Q9Y6D6 1849 aa19.09■□□□□ 0.65
CDK7-215ENST00000629350 HMGB2P26583 209 aaKnown RBP19.08■□□□□ 0.64
CDK7-215ENST00000629350 USPL1Q5W0Q7 1092 aa19.08■□□□□ 0.64
CDK7-215ENST00000629350 PLEKHF1Q96S99 279 aa19.08■□□□□ 0.64
CDK7-215ENST00000629350 NUDCQ9Y266 331 aa19.08■□□□□ 0.64
CDK7-215ENST00000629350 PCDHB13Q9Y5F0 798 aa19.08■□□□□ 0.64
CDK7-215ENST00000629350 FCHSD2O94868 740 aa19.07■□□□□ 0.64
CDK7-215ENST00000629350 PCDHB8Q9UN66 801 aa19.07■□□□□ 0.64
CDK7-215ENST00000629350 CARMIL3Q8ND23 1372 aa19.06■□□□□ 0.64
CDK7-215ENST00000629350 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
CDK7-215ENST00000629350 PIP4K2AP48426 406 aaPredicted RBP19.06■□□□□ 0.64
CDK7-215ENST00000629350 VSIG10Q8N0Z9 540 aa19.06■□□□□ 0.64
CDK7-215ENST00000629350 NLGN1Q8N2Q7 840 aa19.06■□□□□ 0.64
CDK7-215ENST00000629350 THUMPD2Q9BTF0 503 aaKnown RBP19.06■□□□□ 0.64
CDK7-215ENST00000629350 A0A0G2JLW4 131 aa19.05■□□□□ 0.64
CDK7-215ENST00000629350 POLRMTO00411 1230 aaKnown RBP19.05■□□□□ 0.64
CDK7-215ENST00000629350 DPEP1P16444 411 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms