RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 PIGBQ92521 554 aa8.93□□□□□ -0.98
LINC00649-220ENST00000628906 HACL1Q9UJ83 578 aa8.93□□□□□ -0.98
LINC00649-220ENST00000628906 CGNL1Q0VF96 1302 aa8.92□□□□□ -0.98
LINC00649-220ENST00000628906 LTBP3Q9NS15 1303 aa8.92□□□□□ -0.98
LINC00649-220ENST00000628906 MYCNP04198 464 aaPredicted RBP8.92□□□□□ -0.98
LINC00649-220ENST00000628906 ATP6V1AP38606 617 aa8.92□□□□□ -0.98
LINC00649-220ENST00000628906 FMR1Q06787 632 aaKnown RBP eCLIP8.92□□□□□ -0.98
LINC00649-220ENST00000628906 RC3H1Q5TC82 1133 aaKnown RBP8.92□□□□□ -0.98
LINC00649-220ENST00000628906 SAPCD2Q86UD0 394 aa8.92□□□□□ -0.98
LINC00649-220ENST00000628906 INSRP06213 1382 aa8.91□□□□□ -0.98
LINC00649-220ENST00000628906 TM4SF1P30408 202 aa8.91□□□□□ -0.98
LINC00649-220ENST00000628906 PKN2Q16513 984 aaKnown RBP8.91□□□□□ -0.98
LINC00649-220ENST00000628906 IP6K1Q92551 441 aa8.91□□□□□ -0.98
LINC00649-220ENST00000628906 SAGE1Q9NXZ1 904 aa8.91□□□□□ -0.98
LINC00649-220ENST00000628906 BRCA2P51587 3418 aa8.91□□□□□ -0.98
LINC00649-220ENST00000628906 USP31Q70CQ4 1352 aa8.9□□□□□ -0.98
LINC00649-220ENST00000628906 POLRMTO00411 1230 aaKnown RBP8.9□□□□□ -0.98
LINC00649-220ENST00000628906 RPS6KA4O75676 772 aa8.9□□□□□ -0.98
LINC00649-220ENST00000628906 FKBP8Q14318 412 aa8.9□□□□□ -0.98
LINC00649-220ENST00000628906 COL25A1Q9BXS0 654 aaPredicted RBP8.9□□□□□ -0.98
LINC00649-220ENST00000628906 CACNA1AO00555 2505 aa8.9□□□□□ -0.99
LINC00649-220ENST00000628906 VCANP13611 3396 aa8.89□□□□□ -0.99
LINC00649-220ENST00000628906 NOGQ13253 232 aa8.89□□□□□ -0.99
LINC00649-220ENST00000628906 MAP3K19Q56UN5 1328 aa8.88□□□□□ -0.99
LINC00649-220ENST00000628906 OTUD5Q96G74 571 aa8.88□□□□□ -0.99
LINC00649-220ENST00000628906 STAC3Q96MF2 364 aa8.88□□□□□ -0.99
LINC00649-220ENST00000628906 ZIC5Q96T25 663 aa8.88□□□□□ -0.99
LINC00649-220ENST00000628906 SMG6Q86US8 1419 aaKnown RBP8.88□□□□□ -0.99
LINC00649-220ENST00000628906 SPTBN5Q9NRC6 3674 aaKnown RBP8.87□□□□□ -0.99
LINC00649-220ENST00000628906 FER1L6Q2WGJ9 1857 aa8.87□□□□□ -0.99
LINC00649-220ENST00000628906 CYP27B1O15528 508 aa8.87□□□□□ -0.99
LINC00649-220ENST00000628906 C1QBPQ07021 282 aaKnown RBP8.87□□□□□ -0.99
LINC00649-220ENST00000628906 AKAP4Q5JQC9 854 aa8.87□□□□□ -0.99
LINC00649-220ENST00000628906 LTV1Q96GA3 475 aaPredicted RBP8.87□□□□□ -0.99
LINC00649-220ENST00000628906 TAOK3Q9H2K8 898 aa8.87□□□□□ -0.99
LINC00649-220ENST00000628906 PRDM6Q9NQX0 595 aa8.87□□□□□ -0.99
LINC00649-220ENST00000628906 ASAP1Q9ULH1 1129 aa8.87□□□□□ -0.99
LINC00649-220ENST00000628906 CD163L1Q9NR16 1453 aa8.87□□□□□ -0.99
LINC00649-220ENST00000628906 PCDH11XQ9BZA7 1347 aa8.86□□□□□ -0.99
LINC00649-220ENST00000628906 PCDH11YQ9BZA8 1340 aa8.86□□□□□ -0.99
LINC00649-220ENST00000628906 FAM208AQ9UK61 1670 aaKnown RBP8.86□□□□□ -0.99
LINC00649-220ENST00000628906 H0YIN7 160 aa8.86□□□□□ -0.99
LINC00649-220ENST00000628906 C21orf2O43822 256 aa8.86□□□□□ -0.99
LINC00649-220ENST00000628906 NKX1-1Q15270 411 aaPredicted RBP8.86□□□□□ -0.99
LINC00649-220ENST00000628906 MPHOSPH9Q99550 1183 aa8.86□□□□□ -0.99
LINC00649-220ENST00000628906 ITGB4P16144 1822 aa8.86□□□□□ -0.99
LINC00649-220ENST00000628906 TRPM7Q96QT4 1865 aa8.85□□□□□ -0.99
LINC00649-220ENST00000628906 CNTNAP4Q9C0A0 1308 aa8.85□□□□□ -0.99
LINC00649-220ENST00000628906 USP42Q9H9J4 1324 aaKnown RBP8.85□□□□□ -0.99
LINC00649-220ENST00000628906 TRAF5O00463 557 aa8.85□□□□□ -0.99
LINC00649-220ENST00000628906 C2CD5Q86YS7 1000 aa8.85□□□□□ -0.99
LINC00649-220ENST00000628906 SLC4A9Q96Q91 983 aa8.85□□□□□ -0.99
LINC00649-220ENST00000628906 RNF186Q9NXI6 227 aa8.85□□□□□ -0.99
LINC00649-220ENST00000628906 SRP68Q9UHB9 627 aaKnown RBP8.85□□□□□ -0.99
LINC00649-220ENST00000628906 KDM2AQ9Y2K7 1162 aa8.85□□□□□ -0.99
LINC00649-220ENST00000628906 LTN1O94822 1766 aa8.85□□□□□ -0.99
LINC00649-220ENST00000628906 RNF123Q5XPI4 1314 aa8.84□□□□□ -0.99
LINC00649-220ENST00000628906 DLEC1Q9Y238 1755 aa8.84□□□□□ -0.99
LINC00649-220ENST00000628906 KIAA0100Q14667 2235 aaKnown RBP8.84□□□□□ -0.99
LINC00649-220ENST00000628906 TRPA1O75762 1119 aa8.84□□□□□ -0.99
LINC00649-220ENST00000628906 RAPGEF4Q8WZA2 1011 aa8.84□□□□□ -0.99
LINC00649-220ENST00000628906 ZNF541Q9H0D2 1346 aa8.83□□□□□ -1
LINC00649-220ENST00000628906 TATP17735 454 aaPredicted RBP8.83□□□□□ -1
LINC00649-220ENST00000628906 NBPF6Q5VWK0 638 aa8.83□□□□□ -1
LINC00649-220ENST00000628906 NBPF4Q96M43 638 aa8.83□□□□□ -1
LINC00649-220ENST00000628906 ATG3Q9NT62 314 aa8.83□□□□□ -1
LINC00649-220ENST00000628906 LAMA3Q16787 3333 aa8.82□□□□□ -1
LINC00649-220ENST00000628906 CELF2O95319 508 aaKnown RBP8.82□□□□□ -1
LINC00649-220ENST00000628906 CACNB1Q02641 598 aaPredicted RBP8.82□□□□□ -1
LINC00649-220ENST00000628906 FBXO46Q6PJ61 603 aaPredicted RBP8.82□□□□□ -1
LINC00649-220ENST00000628906 GPC2Q8N158 579 aa8.82□□□□□ -1
LINC00649-220ENST00000628906 DCAF11Q8TEB1 546 aa8.82□□□□□ -1
LINC00649-220ENST00000628906 CENPFP49454 3210 aa8.81□□□□□ -1
LINC00649-220ENST00000628906 POTEFA5A3E0 1075 aa8.81□□□□□ -1
LINC00649-220ENST00000628906 FZD9O00144 591 aa8.81□□□□□ -1
LINC00649-220ENST00000628906 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.81□□□□□ -1
LINC00649-220ENST00000628906 SPINK5Q9NQ38 1064 aaPredicted RBP8.81□□□□□ -1
LINC00649-220ENST00000628906 TMOD3Q9NYL9 352 aa8.81□□□□□ -1
LINC00649-220ENST00000628906 PDZRN3Q9UPQ7 1066 aa8.81□□□□□ -1
LINC00649-220ENST00000628906 KDRP35968 1356 aa8.81□□□□□ -1
LINC00649-220ENST00000628906 KTN1Q86UP2 1357 aaKnown RBP8.81□□□□□ -1
LINC00649-220ENST00000628906 MYH14Q7Z406 1995 aaKnown RBP8.81□□□□□ -1
LINC00649-220ENST00000628906 HTTP42858 3142 aa8.8□□□□□ -1
LINC00649-220ENST00000628906 TTC28Q96AY4 2481 aa8.8□□□□□ -1
LINC00649-220ENST00000628906 LOC105371045A0A1W2PR82 267 aa8.8□□□□□ -1
LINC00649-220ENST00000628906 FAM155AB1AL88 458 aaPredicted RBP8.8□□□□□ -1
LINC00649-220ENST00000628906 SERPINB2P05120 415 aa8.8□□□□□ -1
LINC00649-220ENST00000628906 COL9A1P20849 921 aa8.8□□□□□ -1
LINC00649-220ENST00000628906 HOXC9P31274 260 aa8.8□□□□□ -1
LINC00649-220ENST00000628906 INTS3Q68E01 1043 aaKnown RBP8.8□□□□□ -1
LINC00649-220ENST00000628906 USP50Q70EL3 339 aaPredicted RBP8.8□□□□□ -1
LINC00649-220ENST00000628906 NME9Q86XW9 330 aa8.8□□□□□ -1
LINC00649-220ENST00000628906 ZNF622Q969S3 477 aaKnown RBP eCLIP8.8□□□□□ -1
LINC00649-220ENST00000628906 RBM27Q9P2N5 1060 aaKnown RBP8.8□□□□□ -1
LINC00649-220ENST00000628906 CENPJQ9HC77 1338 aaPredicted RBP8.8□□□□□ -1
LINC00649-220ENST00000628906 KIF23Q02241 960 aaPredicted RBP8.79□□□□□ -1
LINC00649-220ENST00000628906 NFIXQ14938 502 aa8.79□□□□□ -1
LINC00649-220ENST00000628906 SOGA3Q5TF21 947 aa8.79□□□□□ -1
LINC00649-220ENST00000628906 BICDL1Q6ZP65 573 aa8.79□□□□□ -1
LINC00649-220ENST00000628906 SYNE4Q8N205 404 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms