RNA–Protein interactions for RNA: ENST00000628181.1

CHD2-214, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-214ENST00000628181 ADAMTS8Q9UP79 889 aa7.58□□□□□ -1.2
CHD2-214ENST00000628181 CDK11AQ9UQ88 783 aaPredicted RBP7.58□□□□□ -1.2
CHD2-214ENST00000628181 RNF17Q9BXT8 1623 aaKnown RBP7.57□□□□□ -1.2
CHD2-214ENST00000628181 LILRA1O75019 489 aa7.57□□□□□ -1.2
CHD2-214ENST00000628181 NBPF20Q3BBV1 942 aa7.57□□□□□ -1.2
CHD2-214ENST00000628181 POTEAQ6S8J7 498 aa7.57□□□□□ -1.2
CHD2-214ENST00000628181 KDF1Q8NAX2 398 aaPredicted RBP7.57□□□□□ -1.2
CHD2-214ENST00000628181 ZNF784Q8NCA9 323 aaPredicted RBP7.57□□□□□ -1.2
CHD2-214ENST00000628181 POLMQ9NP87 494 aaPredicted RBP7.57□□□□□ -1.2
CHD2-214ENST00000628181 TROQ12816 1431 aaPredicted RBP7.57□□□□□ -1.2
CHD2-214ENST00000628181 CDC42BPBQ9Y5S2 1711 aa7.57□□□□□ -1.2
CHD2-214ENST00000628181 CLIP1P30622 1438 aa7.56□□□□□ -1.2
CHD2-214ENST00000628181 SENP3-EIF4A1A0A087X0R7 540 aa7.56□□□□□ -1.2
CHD2-214ENST00000628181 ERVH48-1M5A8F1 160 aa7.56□□□□□ -1.2
CHD2-214ENST00000628181 USP17L8P0C7I0 530 aa7.56□□□□□ -1.2
CHD2-214ENST00000628181 RANGAP1P46060 587 aaPredicted RBP7.56□□□□□ -1.2
CHD2-214ENST00000628181 RAB15P59190 212 aa7.56□□□□□ -1.2
CHD2-214ENST00000628181 ZNF385CQ66K41 422 aaPredicted RBP7.56□□□□□ -1.2
CHD2-214ENST00000628181 SV2AQ7L0J3 742 aa7.56□□□□□ -1.2
CHD2-214ENST00000628181 PREX2Q70Z35 1606 aa7.56□□□□□ -1.2
CHD2-214ENST00000628181 SYNMO15061 1565 aa7.55□□□□□ -1.2
CHD2-214ENST00000628181 ESPNB1AK53 854 aa7.55□□□□□ -1.2
CHD2-214ENST00000628181 ADH1AP07327 375 aa7.55□□□□□ -1.2
CHD2-214ENST00000628181 SLURP2P0DP57 97 aa7.55□□□□□ -1.2
CHD2-214ENST00000628181 FOXD4L5Q5VV16 416 aaPredicted RBP7.55□□□□□ -1.2
CHD2-214ENST00000628181 DZIP3Q86Y13 1208 aaKnown RBP7.55□□□□□ -1.2
CHD2-214ENST00000628181 KCTD17Q8N5Z5 321 aa7.55□□□□□ -1.2
CHD2-214ENST00000628181 WHAMMQ8TF30 809 aa7.55□□□□□ -1.2
CHD2-214ENST00000628181 PLXNC1O60486 1568 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 SAMD9LQ8IVG5 1584 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 LRRC7Q96NW7 1537 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 LOC100996750A0A140TA64 210 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 CDC14CA4D256 554 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 PTGIRP43119 386 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 RASSF7Q02833 373 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 PNMA1Q8ND90 353 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 KRTAP4-6Q9BYQ5 205 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 SETD1AO15047 1707 aaKnown RBP7.54□□□□□ -1.2
CHD2-214ENST00000628181 MED14O60244 1454 aa7.54□□□□□ -1.2
CHD2-214ENST00000628181 DEPDC5O75140 1603 aa7.53□□□□□ -1.2
CHD2-214ENST00000628181 RFC5P40937 340 aa7.53□□□□□ -1.2
CHD2-214ENST00000628181 ANKLE2Q86XL3 938 aa7.53□□□□□ -1.2
CHD2-214ENST00000628181 TMEM151AQ8N4L1 468 aa7.53□□□□□ -1.2
CHD2-214ENST00000628181 NPHP4O75161 1426 aaPredicted RBP7.52□□□□□ -1.2
CHD2-214ENST00000628181 FMN1Q68DA7 1419 aa7.52□□□□□ -1.2
CHD2-214ENST00000628181 A2MP01023 1474 aa7.52□□□□□ -1.21
CHD2-214ENST00000628181 ARHGEF15O94989 841 aa7.52□□□□□ -1.21
CHD2-214ENST00000628181 GDF11O95390 407 aa7.52□□□□□ -1.21
CHD2-214ENST00000628181 SVOPQ8N4V2 548 aa7.52□□□□□ -1.21
CHD2-214ENST00000628181 TRIM34Q9BYJ4 488 aa7.52□□□□□ -1.21
CHD2-214ENST00000628181 SPAG9O60271 1321 aaKnown RBP7.52□□□□□ -1.21
CHD2-214ENST00000628181 IQGAP1P46940 1657 aa7.51□□□□□ -1.21
CHD2-214ENST00000628181 TNRQ92752 1358 aa7.51□□□□□ -1.21
CHD2-214ENST00000628181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.51□□□□□ -1.21
CHD2-214ENST00000628181 GGT6Q6P531 493 aa7.51□□□□□ -1.21
CHD2-214ENST00000628181 CUEDC1Q9NWM3 386 aaPredicted RBP7.51□□□□□ -1.21
CHD2-214ENST00000628181 ATP7AQ04656 1500 aa7.51□□□□□ -1.21
CHD2-214ENST00000628181 STRCP1A6NGW2 1772 aa7.51□□□□□ -1.21
CHD2-214ENST00000628181 INO80Q9ULG1 1556 aaPredicted RBP7.5□□□□□ -1.21
CHD2-214ENST00000628181 SUZ12Q15022 739 aaKnown RBP7.5□□□□□ -1.21
CHD2-214ENST00000628181 LYSMD3Q7Z3D4 306 aa7.5□□□□□ -1.21
CHD2-214ENST00000628181 SEPT12Q8IYM1 358 aa7.5□□□□□ -1.21
CHD2-214ENST00000628181 THEMISQ8N1K5 641 aaPredicted RBP7.5□□□□□ -1.21
CHD2-214ENST00000628181 FAM135BQ49AJ0 1406 aa7.5□□□□□ -1.21
CHD2-214ENST00000628181 NLRP1Q9C000 1473 aa7.49□□□□□ -1.21
CHD2-214ENST00000628181 SYCP2Q9BX26 1530 aa7.49□□□□□ -1.21
CHD2-214ENST00000628181 FAM135AQ9P2D6 1515 aa7.49□□□□□ -1.21
CHD2-214ENST00000628181 RNF225M0QZC1 329 aaPredicted RBP7.49□□□□□ -1.21
CHD2-214ENST00000628181 CYLDQ9NQC7 956 aa7.49□□□□□ -1.21
CHD2-214ENST00000628181 UGGT1Q9NYU2 1555 aa7.49□□□□□ -1.21
CHD2-214ENST00000628181 PZPP20742 1482 aa7.49□□□□□ -1.21
CHD2-214ENST00000628181 ADAMTS2O95450 1211 aa7.48□□□□□ -1.21
CHD2-214ENST00000628181 RNF144AP50876 292 aaPredicted RBP7.48□□□□□ -1.21
CHD2-214ENST00000628181 GAS6Q14393 721 aa7.48□□□□□ -1.21
CHD2-214ENST00000628181 CDC42BPAQ5VT25 1732 aa7.48□□□□□ -1.21
CHD2-214ENST00000628181 ADGBQ8N7X0 1667 aa7.47□□□□□ -1.21
CHD2-214ENST00000628181 EEA1Q15075 1411 aa7.47□□□□□ -1.21
CHD2-214ENST00000628181 GIGYF1O75420 1035 aaPredicted RBP7.47□□□□□ -1.21
CHD2-214ENST00000628181 LYPD4Q6UWN0 246 aa7.47□□□□□ -1.21
CHD2-214ENST00000628181 PRICKLE2Q7Z3G6 844 aa7.47□□□□□ -1.21
CHD2-214ENST00000628181 GOPCQ9HD26 462 aa7.47□□□□□ -1.21
CHD2-214ENST00000628181 LRRIQ1Q96JM4 1722 aa7.47□□□□□ -1.21
CHD2-214ENST00000628181 MIA2Q96PC5 1412 aa7.46□□□□□ -1.21
CHD2-214ENST00000628181 KIAA1107Q9UPP5 1409 aa7.46□□□□□ -1.21
CHD2-214ENST00000628181 ZBBXA8MT70 800 aa7.46□□□□□ -1.22
CHD2-214ENST00000628181 RHOQP17081 205 aa7.46□□□□□ -1.22
CHD2-214ENST00000628181 SRSF11Q05519 484 aaKnown RBP7.46□□□□□ -1.22
CHD2-214ENST00000628181 TMEM259Q4ZIN3 620 aa7.46□□□□□ -1.22
CHD2-214ENST00000628181 PLEKHH2Q8IVE3 1493 aa7.46□□□□□ -1.22
CHD2-214ENST00000628181 KDM5DQ9BY66 1539 aa7.46□□□□□ -1.22
CHD2-214ENST00000628181 ZC3H13Q5T200 1668 aaKnown RBP7.45□□□□□ -1.22
CHD2-214ENST00000628181 ATP5J2-PTCD1G3V325 749 aa7.45□□□□□ -1.22
CHD2-214ENST00000628181 FBXO45P0C2W1 286 aa7.45□□□□□ -1.22
CHD2-214ENST00000628181 IRS1P35568 1242 aa7.45□□□□□ -1.22
CHD2-214ENST00000628181 HNRNPMP52272 730 aaKnown RBP eCLIP7.45□□□□□ -1.222e-10■■■□□ 17.2
CHD2-214ENST00000628181 GJD4Q96KN9 370 aaPredicted RBP7.45□□□□□ -1.22
CHD2-214ENST00000628181 ZNF777Q9ULD5 760 aaPredicted RBP7.45□□□□□ -1.22
CHD2-214ENST00000628181 PCDHB9Q9Y5E1 797 aa7.45□□□□□ -1.22
CHD2-214ENST00000628181 XIRP1Q702N8 1843 aaKnown RBP7.45□□□□□ -1.22
CHD2-214ENST00000628181 CCDC18Q5T9S5 1454 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms