RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 R3HDM1Q15032 1099 aaKnown RBP10.5□□□□□ -0.73
CHD2-213ENST00000628118 SLC16A10Q8TF71 515 aa10.5□□□□□ -0.73
CHD2-213ENST00000628118 SLC4A9Q96Q91 983 aa10.5□□□□□ -0.73
CHD2-213ENST00000628118 TFCP2L1Q9NZI6 479 aa10.5□□□□□ -0.73
CHD2-213ENST00000628118 CHL1O00533 1208 aa10.49□□□□□ -0.73
CHD2-213ENST00000628118 SNRPA1P09661 255 aaKnown RBP10.49□□□□□ -0.73
CHD2-213ENST00000628118 ZNF827Q17R98 1081 aa10.49□□□□□ -0.73
CHD2-213ENST00000628118 MIER1Q8N108 512 aa10.49□□□□□ -0.73
CHD2-213ENST00000628118 LINC00116Q8NCU8 138 aa10.49□□□□□ -0.73
CHD2-213ENST00000628118 ZNF496Q96IT1 587 aaPredicted RBP10.49□□□□□ -0.73
CHD2-213ENST00000628118 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
CHD2-213ENST00000628118 IFT57Q9NWB7 429 aa10.49□□□□□ -0.73
CHD2-213ENST00000628118 TSPYL4Q9UJ04 414 aa10.49□□□□□ -0.73
CHD2-213ENST00000628118 COL5A3P25940 1745 aaPredicted RBP10.49□□□□□ -0.73
CHD2-213ENST00000628118 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
CHD2-213ENST00000628118 RPS6KA4O75676 772 aa10.48□□□□□ -0.73
CHD2-213ENST00000628118 KCNQ4P56696 695 aa10.48□□□□□ -0.73
CHD2-213ENST00000628118 GNAI1P63096 354 aa10.48□□□□□ -0.73
CHD2-213ENST00000628118 WDR63Q8IWG1 891 aa10.48□□□□□ -0.73
CHD2-213ENST00000628118 DNAJC10Q8IXB1 793 aa10.48□□□□□ -0.73
CHD2-213ENST00000628118 THUMPD2Q9BTF0 503 aaKnown RBP10.48□□□□□ -0.73
CHD2-213ENST00000628118 RTCBQ9Y3I0 505 aaKnown RBP10.48□□□□□ -0.73
CHD2-213ENST00000628118 IL16Q14005 1332 aa10.48□□□□□ -0.73
CHD2-213ENST00000628118 TJP1Q07157 1748 aa10.47□□□□□ -0.73
CHD2-213ENST00000628118 PSDA5PKW4 1024 aaPredicted RBP10.47□□□□□ -0.73
CHD2-213ENST00000628118 CYP19A1P11511 503 aaPredicted RBP10.47□□□□□ -0.73
CHD2-213ENST00000628118 CRKLP46109 303 aaKnown RBP10.47□□□□□ -0.73
CHD2-213ENST00000628118 EIF4A1P60842 406 aaKnown RBP10.47□□□□□ -0.73
CHD2-213ENST00000628118 WWC1Q8IX03 1113 aa10.47□□□□□ -0.73
CHD2-213ENST00000628118 REM2Q8IYK8 340 aaPredicted RBP10.47□□□□□ -0.73
CHD2-213ENST00000628118 CHMP4AQ9BY43 222 aa10.47□□□□□ -0.73
CHD2-213ENST00000628118 CCDC87Q9NVE4 849 aa10.47□□□□□ -0.73
CHD2-213ENST00000628118 PNPLA7Q6ZV29 1317 aa10.47□□□□□ -0.73
CHD2-213ENST00000628118 UBR3Q6ZT12 1888 aa10.47□□□□□ -0.73
CHD2-213ENST00000628118 GNPATO15228 680 aa10.46□□□□□ -0.73
CHD2-213ENST00000628118 KCNQ3O43525 872 aa10.46□□□□□ -0.73
CHD2-213ENST00000628118 HOXB7P09629 217 aa10.46□□□□□ -0.73
CHD2-213ENST00000628118 ZNF853P0CG23 659 aa10.46□□□□□ -0.73
CHD2-213ENST00000628118 TRAPPC3LQ5T215 181 aa10.46□□□□□ -0.73
CHD2-213ENST00000628118 MTFR1LQ9H019 292 aa10.46□□□□□ -0.73
CHD2-213ENST00000628118 SOS1Q07889 1333 aaPredicted RBP10.46□□□□□ -0.73
CHD2-213ENST00000628118 CASZ1Q86V15 1759 aa10.46□□□□□ -0.74
CHD2-213ENST00000628118 MYH14Q7Z406 1995 aaKnown RBP10.45□□□□□ -0.74
CHD2-213ENST00000628118 ERBB4Q15303 1308 aa10.45□□□□□ -0.74
CHD2-213ENST00000628118 A0A087WZG4 1122 aa10.45□□□□□ -0.74
CHD2-213ENST00000628118 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.45□□□□□ -0.74
CHD2-213ENST00000628118 GIGYF1O75420 1035 aaPredicted RBP10.45□□□□□ -0.74
CHD2-213ENST00000628118 INTS5Q6P9B9 1019 aaKnown RBP10.45□□□□□ -0.74
CHD2-213ENST00000628118 MIS18AQ9NYP9 233 aa10.45□□□□□ -0.74
CHD2-213ENST00000628118 TUBGCP6Q96RT7 1819 aa10.44□□□□□ -0.74
CHD2-213ENST00000628118 IL6STP40189 918 aaPredicted RBP10.44□□□□□ -0.74
CHD2-213ENST00000628118 NPM2Q86SE8 214 aaKnown RBP10.44□□□□□ -0.74
CHD2-213ENST00000628118 COL23A1Q86Y22 540 aaPredicted RBP10.44□□□□□ -0.74
CHD2-213ENST00000628118 SPON1Q9HCB6 807 aa10.44□□□□□ -0.74
CHD2-213ENST00000628118 LAS1LQ9Y4W2 734 aaKnown RBP10.44□□□□□ -0.74
CHD2-213ENST00000628118 RGL2O15211 777 aa10.43□□□□□ -0.74
CHD2-213ENST00000628118 RFC4P35249 363 aa10.43□□□□□ -0.74
CHD2-213ENST00000628118 MBIPQ9NS73 344 aa10.43□□□□□ -0.74
CHD2-213ENST00000628118 ZBTB1Q9Y2K1 713 aa10.43□□□□□ -0.74
CHD2-213ENST00000628118 USP16Q9Y5T5 823 aa10.43□□□□□ -0.74
CHD2-213ENST00000628118 LAMB4A4D0S4 1761 aa10.43□□□□□ -0.74
CHD2-213ENST00000628118 PHF14O94880 888 aa10.42□□□□□ -0.74
CHD2-213ENST00000628118 EIF5P55010 431 aaKnown RBP10.42□□□□□ -0.74
CHD2-213ENST00000628118 ARHGEF1Q92888 912 aaKnown RBP10.42□□□□□ -0.74
CHD2-213ENST00000628118 MYH16Q9H6N6 1097 aa10.42□□□□□ -0.74
CHD2-213ENST00000628118 LRP5O75197 1615 aa10.42□□□□□ -0.74
CHD2-213ENST00000628118 COL15A1P39059 1388 aa10.41□□□□□ -0.74
CHD2-213ENST00000628118 ZNF521Q96K83 1311 aa10.41□□□□□ -0.74
CHD2-213ENST00000628118 POLD1P28340 1107 aa10.41□□□□□ -0.74
CHD2-213ENST00000628118 NLGN1Q8N2Q7 840 aa10.41□□□□□ -0.74
CHD2-213ENST00000628118 COL24A1Q17RW2 1714 aa10.41□□□□□ -0.74
CHD2-213ENST00000628118 USP42Q9H9J4 1324 aaKnown RBP10.4□□□□□ -0.74
CHD2-213ENST00000628118 ZPR1O75312 459 aa10.4□□□□□ -0.74
CHD2-213ENST00000628118 A1BGP04217 495 aa10.4□□□□□ -0.74
CHD2-213ENST00000628118 CANXP27824 592 aaKnown RBP10.4□□□□□ -0.74
CHD2-213ENST00000628118 GOLGA2Q08379 1002 aa10.4□□□□□ -0.74
CHD2-213ENST00000628118 NARFQ9UHQ1 456 aa10.4□□□□□ -0.74
CHD2-213ENST00000628118 SALL2Q9Y467 1007 aaPredicted RBP10.4□□□□□ -0.74
CHD2-213ENST00000628118 PRAMEF22A3QJZ6 481 aa10.39□□□□□ -0.75
CHD2-213ENST00000628118 E9PSI1 815 aa10.39□□□□□ -0.75
CHD2-213ENST00000628118 ZBTB7AO95365 584 aa10.39□□□□□ -0.75
CHD2-213ENST00000628118 DUSP27Q5VZP5 1158 aa10.39□□□□□ -0.75
CHD2-213ENST00000628118 AMIGO3Q86WK7 504 aa10.39□□□□□ -0.75
CHD2-213ENST00000628118 PDGFDQ9GZP0 370 aaPredicted RBP10.39□□□□□ -0.75
CHD2-213ENST00000628118 C4AP0C0L4 1744 aa10.38□□□□□ -0.75
CHD2-213ENST00000628118 GYS1P13807 737 aa10.38□□□□□ -0.75
CHD2-213ENST00000628118 HDGFL1Q5TGJ6 251 aa10.38□□□□□ -0.75
CHD2-213ENST00000628118 CLEC4GQ6UXB4 293 aa10.38□□□□□ -0.75
CHD2-213ENST00000628118 SGIP1Q9BQI5 828 aa10.38□□□□□ -0.75
CHD2-213ENST00000628118 DDX21Q9NR30 783 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHD2-213ENST00000628118 DBF4Q9UBU7 674 aaPredicted RBP10.38□□□□□ -0.75
CHD2-213ENST00000628118 ZNF652Q9Y2D9 606 aa10.38□□□□□ -0.75
CHD2-213ENST00000628118 FANCIQ9NVI1 1328 aa10.37□□□□□ -0.75
CHD2-213ENST00000628118 NBPF26B4DH59 902 aa10.37□□□□□ -0.75
CHD2-213ENST00000628118 EIF2S2P20042 333 aaKnown RBP10.37□□□□□ -0.75
CHD2-213ENST00000628118 PTGER2P43116 358 aa10.37□□□□□ -0.75
CHD2-213ENST00000628118 CCDC30Q5VVM6 783 aa10.37□□□□□ -0.75
CHD2-213ENST00000628118 NBPF10Q6P3W6 841 aaKnown RBP10.37□□□□□ -0.75
CHD2-213ENST00000628118 DZIP3Q86Y13 1208 aaKnown RBP10.37□□□□□ -0.75
CHD2-213ENST00000628118 NBPF15Q8N660 670 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms