RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 PLCB3Q01970 1234 aa4.24□□□□□ -1.73
SCN8A-210ENST00000627665 FKBP5Q13451 457 aaPredicted RBP4.24□□□□□ -1.73
SCN8A-210ENST00000627665 NAA30Q147X3 362 aaPredicted RBP4.24□□□□□ -1.73
SCN8A-210ENST00000627665 TSNAXIP1Q2TAA8 658 aa4.24□□□□□ -1.73
SCN8A-210ENST00000627665 C16orf46Q6P387 395 aa4.24□□□□□ -1.73
SCN8A-210ENST00000627665 FBXO33Q7Z6M2 555 aa4.24□□□□□ -1.73
SCN8A-210ENST00000627665 ABTB2Q8N961 1025 aa4.24□□□□□ -1.73
SCN8A-210ENST00000627665 TTC16Q8NEE8 873 aa4.24□□□□□ -1.73
SCN8A-210ENST00000627665 KCTD12Q96CX2 325 aaKnown RBP4.24□□□□□ -1.73
SCN8A-210ENST00000627665 PTPRMP28827 1452 aa4.24□□□□□ -1.73
SCN8A-210ENST00000627665 PCF11O94913 1555 aaKnown RBP4.23□□□□□ -1.73
SCN8A-210ENST00000627665 GLI2P10070 1586 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 PPRC1Q5VV67 1664 aaKnown RBP4.23□□□□□ -1.73
SCN8A-210ENST00000627665 ERVH48-1M5A8F1 160 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 SCAMP3O14828 347 aaKnown RBP4.23□□□□□ -1.73
SCN8A-210ENST00000627665 CD2BP2O95400 341 aaKnown RBP4.23□□□□□ -1.73
SCN8A-210ENST00000627665 GNRH1P01148 92 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 NEFLP07196 543 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 HSP90B1P14625 803 aaKnown RBP4.23□□□□□ -1.73
SCN8A-210ENST00000627665 PCSK2P16519 638 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 NPR3P17342 541 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 GTF2E1P29083 439 aaPredicted RBP4.23□□□□□ -1.73
SCN8A-210ENST00000627665 SCNN1AP37088 669 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 USP5P45974 858 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 GDF10P55107 478 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 ERVK-9P63128 1117 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 SH3BP2P78314 561 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 MYT1Q01538 1121 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 ARID5BQ14865 1188 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 NOM1Q5C9Z4 860 aaKnown RBP4.23□□□□□ -1.73
SCN8A-210ENST00000627665 STAG2Q8N3U4 1231 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 NBPF15Q8N660 670 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 EHBP1Q8NDI1 1231 aa4.23□□□□□ -1.73
SCN8A-210ENST00000627665 TTBK1Q5TCY1 1321 aaPredicted RBP4.22□□□□□ -1.73
SCN8A-210ENST00000627665 S1PR4O95977 384 aa4.22□□□□□ -1.73
SCN8A-210ENST00000627665 INHAP05111 366 aa4.22□□□□□ -1.73
SCN8A-210ENST00000627665 HSPA2P54652 639 aa4.22□□□□□ -1.73
SCN8A-210ENST00000627665 C4orf48Q5BLP8 95 aa4.22□□□□□ -1.73
SCN8A-210ENST00000627665 TJAP1Q5JTD0 557 aa4.22□□□□□ -1.73
SCN8A-210ENST00000627665 TNS4Q8IZW8 715 aa4.22□□□□□ -1.73
SCN8A-210ENST00000627665 PGPEP1Q9NXJ5 209 aa4.22□□□□□ -1.73
SCN8A-210ENST00000627665 STIM2Q9P246 746 aa4.22□□□□□ -1.73
SCN8A-210ENST00000627665 PTPRGP23470 1445 aa4.21□□□□□ -1.73
SCN8A-210ENST00000627665 ABCC2Q92887 1545 aa4.21□□□□□ -1.73
SCN8A-210ENST00000627665 TREHO43280 583 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 PRPF40AO75400 957 aaKnown RBP4.21□□□□□ -1.74
SCN8A-210ENST00000627665 LGR5O75473 907 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 RPLP1P05386 114 aaKnown RBP4.21□□□□□ -1.74
SCN8A-210ENST00000627665 LDHBP07195 334 aaKnown RBP4.21□□□□□ -1.74
SCN8A-210ENST00000627665 BRD2P25440 801 aaKnown RBP4.21□□□□□ -1.74
SCN8A-210ENST00000627665 ERCC5P28715 1186 aaPredicted RBP4.21□□□□□ -1.74
SCN8A-210ENST00000627665 RPIAP49247 311 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 PTPN5P54829 565 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 TRIM32Q13049 653 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 MTMR3Q13615 1198 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 GNL2Q13823 731 aaKnown RBP4.21□□□□□ -1.74
SCN8A-210ENST00000627665 INTS6LQ5JSJ4 861 aaKnown RBP4.21□□□□□ -1.74
SCN8A-210ENST00000627665 ALG1LQ6GMV1 187 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 UBXN4Q92575 508 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 SLC4A9Q96Q91 983 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 PRKD2Q9BZL6 878 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 FAM13BQ9NYF5 915 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 SERTAD1Q9UHV2 236 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 EPRSP07814 1512 aaKnown RBP4.21□□□□□ -1.74
SCN8A-210ENST00000627665 ERICH3Q5RHP9 1530 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 RUSC2Q8N2Y8 1516 aa4.21□□□□□ -1.74
SCN8A-210ENST00000627665 WRNQ14191 1432 aaPredicted RBP eCLIP4.21□□□□□ -1.74
SCN8A-210ENST00000627665 TMEM229AB2RXF0 380 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 SORBS3O60504 671 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 P4HBP07237 508 aaKnown RBP4.2□□□□□ -1.74
SCN8A-210ENST00000627665 MPSTP25325 297 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 MAPK8P45983 427 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 PSMA6P60900 246 aaKnown RBP4.2□□□□□ -1.74
SCN8A-210ENST00000627665 PSMD2Q13200 908 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 NR5A1Q13285 461 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 TMC7Q7Z402 723 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 MPNDQ8N594 471 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 ANKLE1Q8NAG6 615 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 ZNF516Q92618 1163 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 FRMD6Q96NE9 622 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 CYLDQ9NQC7 956 aa4.2□□□□□ -1.74
SCN8A-210ENST00000627665 SCHIP1Q9P0W5 487 aaPredicted RBP4.2□□□□□ -1.74
SCN8A-210ENST00000627665 POTEB3A0JP26 581 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 A6NJY4 79 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 CDK2AP1O14519 115 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 FSHRP23945 695 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 EIF1AXP47813 144 aaKnown RBP4.19□□□□□ -1.74
SCN8A-210ENST00000627665 SCTRP47872 440 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 SMTNP53814 917 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 KCNC4Q03721 635 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 FMR1Q06787 632 aaKnown RBP eCLIP4.19□□□□□ -1.74
SCN8A-210ENST00000627665 EHHADHQ08426 723 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 ECM1Q16610 540 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 HIF1AQ16665 826 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 NAALADL2Q58DX5 795 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 POTEBQ6S5H4 581 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 SLC9A9Q8IVB4 645 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 CCDC116Q8IYX3 515 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 TMEM87AQ8NBN3 555 aa4.19□□□□□ -1.74
SCN8A-210ENST00000627665 PUS7Q96PZ0 661 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms