RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
SPTAN1-212ENST00000627441 COL6A3P12111 3177 aa11.92□□□□□ -0.5
SPTAN1-212ENST00000627441 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
SPTAN1-212ENST00000627441 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
SPTAN1-212ENST00000627441 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
SPTAN1-212ENST00000627441 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
SPTAN1-212ENST00000627441 RFC4P35249 363 aa11.91□□□□□ -0.5
SPTAN1-212ENST00000627441 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
SPTAN1-212ENST00000627441 CARMIL3Q8ND23 1372 aa11.91□□□□□ -0.5
SPTAN1-212ENST00000627441 HOXC9P31274 260 aa11.9□□□□□ -0.5
SPTAN1-212ENST00000627441 DDX21Q9NR30 783 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPTAN1-212ENST00000627441 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
SPTAN1-212ENST00000627441 ECE1P42892 770 aa11.89□□□□□ -0.51
SPTAN1-212ENST00000627441 TTLL6Q8N841 843 aa11.89□□□□□ -0.51
SPTAN1-212ENST00000627441 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
SPTAN1-212ENST00000627441 ZIC5Q96T25 663 aa11.89□□□□□ -0.51
SPTAN1-212ENST00000627441 NBPF15Q8N660 670 aa11.88□□□□□ -0.51
SPTAN1-212ENST00000627441 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
SPTAN1-212ENST00000627441 MAP3K19Q56UN5 1328 aa11.87□□□□□ -0.51
SPTAN1-212ENST00000627441 ZNF541Q9H0D2 1346 aa11.87□□□□□ -0.51
SPTAN1-212ENST00000627441 RPS6KA4O75676 772 aa11.87□□□□□ -0.51
SPTAN1-212ENST00000627441 CST9Q5W186 159 aa11.87□□□□□ -0.51
SPTAN1-212ENST00000627441 CIAPIN1Q6FI81 312 aa11.87□□□□□ -0.51
SPTAN1-212ENST00000627441 SLC17A8Q8NDX2 589 aa11.87□□□□□ -0.51
SPTAN1-212ENST00000627441 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
SPTAN1-212ENST00000627441 TRIOBPQ9H2D6 2365 aa11.87□□□□□ -0.51
SPTAN1-212ENST00000627441 CNTNAP4Q9C0A0 1308 aa11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 TJP1Q07157 1748 aa11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 C21orf2O43822 256 aa11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 TATP17735 454 aaPredicted RBP11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 EPHX2P34913 555 aa11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 MAP2K2P36507 400 aa11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 RAPGEF4Q8WZA2 1011 aa11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
SPTAN1-212ENST00000627441 TRAF5O00463 557 aa11.85□□□□□ -0.51
SPTAN1-212ENST00000627441 CA12O43570 354 aa11.85□□□□□ -0.51
SPTAN1-212ENST00000627441 TM4SF1P30408 202 aa11.85□□□□□ -0.51
SPTAN1-212ENST00000627441 C2CD5Q86YS7 1000 aa11.85□□□□□ -0.51
SPTAN1-212ENST00000627441 TLL2Q9Y6L7 1015 aa11.85□□□□□ -0.51
SPTAN1-212ENST00000627441 CGNL1Q0VF96 1302 aa11.85□□□□□ -0.51
SPTAN1-212ENST00000627441 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
SPTAN1-212ENST00000627441 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
SPTAN1-212ENST00000627441 HACL1Q9UJ83 578 aa11.84□□□□□ -0.51
SPTAN1-212ENST00000627441 EVC2Q86UK5 1308 aa11.84□□□□□ -0.51
SPTAN1-212ENST00000627441 TMOD3Q9NYL9 352 aa11.83□□□□□ -0.52
SPTAN1-212ENST00000627441 SMG6Q86US8 1419 aaKnown RBP11.83□□□□□ -0.52
SPTAN1-212ENST00000627441 PITPNM2Q9BZ72 1349 aa11.83□□□□□ -0.52
SPTAN1-212ENST00000627441 RC3H1Q5TC82 1133 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-212ENST00000627441 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-212ENST00000627441 TAOK3Q9H2K8 898 aa11.82□□□□□ -0.52
SPTAN1-212ENST00000627441 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
SPTAN1-212ENST00000627441 LTBP3Q9NS15 1303 aa11.82□□□□□ -0.52
SPTAN1-212ENST00000627441 AKAP11Q9UKA4 1901 aa11.82□□□□□ -0.52
SPTAN1-212ENST00000627441 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
SPTAN1-212ENST00000627441 AMPHP49418 695 aa11.8□□□□□ -0.52
SPTAN1-212ENST00000627441 NFIXQ14938 502 aa11.8□□□□□ -0.52
SPTAN1-212ENST00000627441 USPL1Q5W0Q7 1092 aa11.8□□□□□ -0.52
SPTAN1-212ENST00000627441 BRCA2P51587 3418 aa11.8□□□□□ -0.52
SPTAN1-212ENST00000627441 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
SPTAN1-212ENST00000627441 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-212ENST00000627441 SAPCD2Q86UD0 394 aa11.79□□□□□ -0.52
SPTAN1-212ENST00000627441 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-212ENST00000627441 EDC4Q6P2E9 1401 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-212ENST00000627441 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
SPTAN1-212ENST00000627441 CRKLP46109 303 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-212ENST00000627441 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-212ENST00000627441 PNMA8AQ86V59 439 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-212ENST00000627441 ZNF622Q969S3 477 aaKnown RBP eCLIP11.78□□□□□ -0.52
SPTAN1-212ENST00000627441 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
SPTAN1-212ENST00000627441 CEP290O15078 2479 aa11.78□□□□□ -0.52
SPTAN1-212ENST00000627441 H0YIN7 160 aa11.77□□□□□ -0.53
SPTAN1-212ENST00000627441 CCDC24Q8N4L8 307 aa11.77□□□□□ -0.53
SPTAN1-212ENST00000627441 UNC80Q8N2C7 3258 aa11.76□□□□□ -0.53
SPTAN1-212ENST00000627441 COL4A5P29400 1685 aa11.76□□□□□ -0.53
SPTAN1-212ENST00000627441 SERPINB2P05120 415 aa11.76□□□□□ -0.53
SPTAN1-212ENST00000627441 CTU1Q7Z7A3 348 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-212ENST00000627441 HTTP42858 3142 aa11.76□□□□□ -0.53
SPTAN1-212ENST00000627441 A0A1W2PP64 1363 aa11.76□□□□□ -0.53
SPTAN1-212ENST00000627441 RTL1A6NKG5 1358 aa11.76□□□□□ -0.53
SPTAN1-212ENST00000627441 INSRP06213 1382 aa11.76□□□□□ -0.53
SPTAN1-212ENST00000627441 CENPFP49454 3210 aa11.75□□□□□ -0.53
SPTAN1-212ENST00000627441 BCL2L12Q9HB09 334 aa11.75□□□□□ -0.53
SPTAN1-212ENST00000627441 RANBP2P49792 3224 aaKnown RBP11.75□□□□□ -0.53
SPTAN1-212ENST00000627441 CELF2O95319 508 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-212ENST00000627441 HSP90AB2PQ58FF8 381 aa11.73□□□□□ -0.53
SPTAN1-212ENST00000627441 BICDL1Q6ZP65 573 aa11.73□□□□□ -0.53
SPTAN1-212ENST00000627441 RBBP6Q7Z6E9 1792 aaKnown RBP11.73□□□□□ -0.53
SPTAN1-212ENST00000627441 ZNF277Q9NRM2 450 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-212ENST00000627441 ANKRD26Q9UPS8 1709 aa11.72□□□□□ -0.53
SPTAN1-212ENST00000627441 NCAPD2Q15021 1401 aa11.72□□□□□ -0.53
SPTAN1-212ENST00000627441 TRPA1O75762 1119 aa11.72□□□□□ -0.53
SPTAN1-212ENST00000627441 EPS15P42566 896 aa11.72□□□□□ -0.53
SPTAN1-212ENST00000627441 INTS5Q6P9B9 1019 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-212ENST00000627441 OLFM4Q6UX06 510 aa11.72□□□□□ -0.53
SPTAN1-212ENST00000627441 SYNE4Q8N205 404 aa11.72□□□□□ -0.53
SPTAN1-212ENST00000627441 SLC12A5Q9H2X9 1139 aa11.72□□□□□ -0.53
SPTAN1-212ENST00000627441 RNF186Q9NXI6 227 aa11.72□□□□□ -0.53
SPTAN1-212ENST00000627441 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms