RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 EYA1Q99502 592 aa12.04□□□□□ -0.48
TCF4-258ENST00000627320 ADAMTSL1Q8N6G6 1762 aa12.04□□□□□ -0.48
TCF4-258ENST00000627320 CNTNAP4Q9C0A0 1308 aa12.04□□□□□ -0.48
TCF4-258ENST00000627320 PPM1GO15355 546 aaPredicted RBP12.03□□□□□ -0.48
TCF4-258ENST00000627320 ABHD8Q96I13 439 aa12.03□□□□□ -0.48
TCF4-258ENST00000627320 USP42Q9H9J4 1324 aaKnown RBP12.03□□□□□ -0.48
TCF4-258ENST00000627320 CNTNAP1P78357 1384 aa12.03□□□□□ -0.48
TCF4-258ENST00000627320 PTCD1O75127 700 aaKnown RBP12.02□□□□□ -0.49
TCF4-258ENST00000627320 CRKLP46109 303 aaKnown RBP12.02□□□□□ -0.49
TCF4-258ENST00000627320 VEGFBP49765 207 aa12.02□□□□□ -0.49
TCF4-258ENST00000627320 CCDC24Q8N4L8 307 aa12.02□□□□□ -0.49
TCF4-258ENST00000627320 ARFGEF2Q9Y6D5 1785 aa12.02□□□□□ -0.49
TCF4-258ENST00000627320 CASP8AP2Q9UKL3 1982 aa12.01□□□□□ -0.49
TCF4-258ENST00000627320 USPL1Q5W0Q7 1092 aa12.01□□□□□ -0.49
TCF4-258ENST00000627320 LTBP1Q14766 1721 aa12□□□□□ -0.49
TCF4-258ENST00000627320 ST20-MTHFSA0A0A6YYL1 179 aa12□□□□□ -0.49
TCF4-258ENST00000627320 HSPA8P11142 646 aaKnown RBP12□□□□□ -0.49
TCF4-258ENST00000627320 LMNB1P20700 586 aa12□□□□□ -0.49
TCF4-258ENST00000627320 CREBZFQ9NS37 354 aa12□□□□□ -0.49
TCF4-258ENST00000627320 SPG7Q9UQ90 795 aa12□□□□□ -0.49
TCF4-258ENST00000627320 THSD7BQ9C0I4 1608 aa12□□□□□ -0.49
TCF4-258ENST00000627320 SCN4AP35499 1836 aa12□□□□□ -0.49
TCF4-258ENST00000627320 DDNO94850 711 aaPredicted RBP11.99□□□□□ -0.49
TCF4-258ENST00000627320 TM4SF1P30408 202 aa11.99□□□□□ -0.49
TCF4-258ENST00000627320 IFNL2Q8IZJ0 200 aa11.99□□□□□ -0.49
TCF4-258ENST00000627320 PRDM10Q9NQV6 1147 aa11.99□□□□□ -0.49
TCF4-258ENST00000627320 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
TCF4-258ENST00000627320 SCN7AQ01118 1682 aa11.99□□□□□ -0.49
TCF4-258ENST00000627320 PASKQ96RG2 1323 aa11.98□□□□□ -0.49
TCF4-258ENST00000627320 FMR1Q06787 632 aaKnown RBP eCLIP11.98□□□□□ -0.49
TCF4-258ENST00000627320 RC3H1Q5TC82 1133 aaKnown RBP11.98□□□□□ -0.49
TCF4-258ENST00000627320 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
TCF4-258ENST00000627320 INTS5Q6P9B9 1019 aaKnown RBP11.98□□□□□ -0.49
TCF4-258ENST00000627320 CARD14Q9BXL6 1004 aa11.98□□□□□ -0.49
TCF4-258ENST00000627320 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
TCF4-258ENST00000627320 TSKSQ9UJT2 592 aa11.98□□□□□ -0.49
TCF4-258ENST00000627320 CCDC85CA6NKD9 419 aa11.97□□□□□ -0.49
TCF4-258ENST00000627320 CTCFP49711 727 aaPredicted RBP11.97□□□□□ -0.49
TCF4-258ENST00000627320 NFIXQ14938 502 aa11.97□□□□□ -0.49
TCF4-258ENST00000627320 C2CD5Q86YS7 1000 aa11.96□□□□□ -0.49
TCF4-258ENST00000627320 WBP1LQ9NX94 342 aa11.96□□□□□ -0.49
TCF4-258ENST00000627320 TRPM7Q96QT4 1865 aa11.95□□□□□ -0.5
TCF4-258ENST00000627320 UBR2Q8IWV8 1755 aa11.95□□□□□ -0.5
TCF4-258ENST00000627320 ZC3H4Q9UPT8 1303 aaKnown RBP11.95□□□□□ -0.5
TCF4-258ENST00000627320 C21orf2O43822 256 aa11.95□□□□□ -0.5
TCF4-258ENST00000627320 EIF4A2Q14240 407 aaKnown RBP11.95□□□□□ -0.5
TCF4-258ENST00000627320 DNAJC10Q8IXB1 793 aa11.95□□□□□ -0.5
TCF4-258ENST00000627320 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
TCF4-258ENST00000627320 BICDL1Q6ZP65 573 aa11.94□□□□□ -0.5
TCF4-258ENST00000627320 AEBP1Q8IUX7 1158 aa11.94□□□□□ -0.5
TCF4-258ENST00000627320 SOS1Q07889 1333 aaPredicted RBP11.93□□□□□ -0.5
TCF4-258ENST00000627320 ZNF541Q9H0D2 1346 aa11.93□□□□□ -0.5
TCF4-258ENST00000627320 BCORQ6W2J9 1755 aa11.93□□□□□ -0.5
TCF4-258ENST00000627320 SERPINB2P05120 415 aa11.93□□□□□ -0.5
TCF4-258ENST00000627320 TNNT2P45379 298 aaPredicted RBP11.93□□□□□ -0.5
TCF4-258ENST00000627320 MLLT1Q03111 559 aaPredicted RBP11.93□□□□□ -0.5
TCF4-258ENST00000627320 ERFEQ4G0M1 354 aa11.93□□□□□ -0.5
TCF4-258ENST00000627320 TTLL6Q8N841 843 aa11.93□□□□□ -0.5
TCF4-258ENST00000627320 AIDAQ96BJ3 306 aa11.93□□□□□ -0.5
TCF4-258ENST00000627320 COL15A1P39059 1388 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 KIF24Q5T7B8 1368 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 WASHC2AQ641Q2 1341 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 COL4A5P29400 1685 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 ITGBL1O95965 494 aaPredicted RBP11.92□□□□□ -0.5
TCF4-258ENST00000627320 CABP4P57796 275 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 ZNF530Q6P9A1 599 aaPredicted RBP11.92□□□□□ -0.5
TCF4-258ENST00000627320 SLC51AQ86UW1 340 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 NFATC2IPQ8NCF5 419 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 PUS7Q96PZ0 661 aaKnown RBP11.92□□□□□ -0.5
TCF4-258ENST00000627320 POLKQ9UBT6 870 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 ZBTB1Q9Y2K1 713 aa11.92□□□□□ -0.5
TCF4-258ENST00000627320 HMGB2P26583 209 aaKnown RBP11.91□□□□□ -0.5
TCF4-258ENST00000627320 GRM1Q13255 1194 aa11.91□□□□□ -0.5
TCF4-258ENST00000627320 SLC39A6Q13433 755 aa11.91□□□□□ -0.5
TCF4-258ENST00000627320 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
TCF4-258ENST00000627320 OLFM4Q6UX06 510 aa11.91□□□□□ -0.5
TCF4-258ENST00000627320 ZNF622Q969S3 477 aaKnown RBP eCLIP11.91□□□□□ -0.52e-6■■■□□ 17.7
TCF4-258ENST00000627320 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
TCF4-258ENST00000627320 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
TCF4-258ENST00000627320 TMEM88BA6NKF7 163 aa11.9□□□□□ -0.5
TCF4-258ENST00000627320 ERVV-2B6SEH9 535 aa11.9□□□□□ -0.5
TCF4-258ENST00000627320 MAP1SQ66K74 1059 aaPredicted RBP11.9□□□□□ -0.5
TCF4-258ENST00000627320 TAF1DQ9H5J8 278 aaPredicted RBP11.9□□□□□ -0.5
TCF4-258ENST00000627320 ZPR1O75312 459 aa11.89□□□□□ -0.51
TCF4-258ENST00000627320 RNF123Q5XPI4 1314 aa11.88□□□□□ -0.51
TCF4-258ENST00000627320 WDR33Q9C0J8 1336 aaKnown RBP11.88□□□□□ -0.51
TCF4-258ENST00000627320 CYP19A1P11511 503 aaPredicted RBP11.88□□□□□ -0.51
TCF4-258ENST00000627320 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
TCF4-258ENST00000627320 DPY19L2Q6NUT2 758 aa11.88□□□□□ -0.51
TCF4-258ENST00000627320 PCDH10Q9P2E7 1040 aa11.88□□□□□ -0.51
TCF4-258ENST00000627320 NARFQ9UHQ1 456 aa11.88□□□□□ -0.51
TCF4-258ENST00000627320 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
TCF4-258ENST00000627320 RGS19P49795 217 aa11.87□□□□□ -0.51
TCF4-258ENST00000627320 CYP4F22Q6NT55 531 aa11.87□□□□□ -0.51
TCF4-258ENST00000627320 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
TCF4-258ENST00000627320 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
TCF4-258ENST00000627320 RASSF10A6NK89 507 aa11.86□□□□□ -0.51
TCF4-258ENST00000627320 H0YIN7 160 aa11.86□□□□□ -0.51
TCF4-258ENST00000627320 AOC2O75106 756 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms